ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 214 |
| AcoI | YGGCCR | 1 cut(s) | 265 |
| AfaI | GTAC | 1 cut(s) | 179 |
| AgsI | TTSAA | 3 cut(s) | 120, 149, 175 |
| AluBI | AGCT | 1 cut(s) | 11 |
| AluI | AGCT | 1 cut(s) | 11 |
| Alw26I | GTCTC | 1 cut(s) | 154 |
| AoxI | GGCC | 2 cut(s) | 18, 265 |
| AspS9I | GGNCC | 2 cut(s) | 18, 94 |
| AsuC2I | CCSGG | 1 cut(s) | 92 |
| AvaII | GGWCC | 1 cut(s) | 94 |
| BccI | CCATC | 1 cut(s) | 50 |
| BceAI | ACGGC | 1 cut(s) | 318 |
| BciVI | GTATCC | 1 cut(s) | 98 |
| BcnI | CCSGG | 1 cut(s) | 92 |
| BcoDI | GTCTC | 1 cut(s) | 154 |
| BfuI | GTATCC | 1 cut(s) | 98 |
| Bme1390I | CCNGG | 1 cut(s) | 92 |
| Bme18I | GGWCC | 1 cut(s) | 94 |
| BmgT120I | GGNCC | 2 cut(s) | 18, 94 |
| BmiI | GGNNCC | 2 cut(s) | 19, 95 |
| BmrFI | CCNGG | 1 cut(s) | 92 |
| BpuMI | CCSGG | 1 cut(s) | 92 |
| Bse118I | RCCGGY | 1 cut(s) | 267 |
| Bse1I | ACTGG | 1 cut(s) | 134 |
| BseGI | GGATG | 1 cut(s) | 67 |
| BseMII | CTCAG | 1 cut(s) | 245 |
| BseNI | ACTGG | 1 cut(s) | 134 |
| BshFI | GGCC | 2 cut(s) | 20, 267 |
| BsiSI | CCGG | 2 cut(s) | 91, 268 |
| BsmAI | GTCTC | 1 cut(s) | 154 |
| BsnI | GGCC | 2 cut(s) | 20, 267 |
| BspANI | GGCC | 2 cut(s) | 20, 267 |
| BspCNI | CTCAG | 1 cut(s) | 244 |
| BspLI | GGNNCC | 2 cut(s) | 19, 95 |
| BsrFI | RCCGGY | 1 cut(s) | 267 |
| BsrI | ACTGG | 1 cut(s) | 134 |
| BssAI | RCCGGY | 1 cut(s) | 267 |
| Bst4CI | ACNGT | 1 cut(s) | 277 |
| Bst6I | CTCTTC | 1 cut(s) | 249 |
| BstDEI | CTNAG | 1 cut(s) | 231 |
| BstF5I | GGATG | 1 cut(s) | 67 |
| BstMAI | GTCTC | 1 cut(s) | 154 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 17 |
| BstSCI | CCNGG | 1 cut(s) | 90 |
| BsuI | GTATCC | 1 cut(s) | 98 |
| BsuRI | GGCC | 2 cut(s) | 20, 267 |
| BtsCI | GGATG | 1 cut(s) | 67 |
| Cfr10I | RCCGGY | 1 cut(s) | 267 |
| Cfr13I | GGNCC | 2 cut(s) | 18, 94 |
| Csp6I | GTAC | 1 cut(s) | 178 |
| CviAII | CATG | 2 cut(s) | 251, 263 |
| CviJI | RGCY | 4 cut(s) | 11, 20, 267, 323 |
| CviKI_1 | RGCY | 4 cut(s) | 11, 20, 267, 323 |
| CviQI | GTAC | 1 cut(s) | 178 |
| DdeI | CTNAG | 1 cut(s) | 231 |
| EaeI | YGGCCR | 1 cut(s) | 265 |
| Eam1104I | CTCTTC | 1 cut(s) | 249 |
| EarI | CTCTTC | 1 cut(s) | 249 |
| Eco47I | GGWCC | 1 cut(s) | 94 |
| FaeI | CATG | 2 cut(s) | 254, 266 |
| FaiI | YATR | 4 cut(s) | 40, 252, 264, 311 |
| FatI | CATG | 2 cut(s) | 250, 262 |
| FblI | GTMKAC | 1 cut(s) | 214 |
| FokI | GGATG | 1 cut(s) | 74 |
| HaeIII | GGCC | 2 cut(s) | 20, 267 |
| HapII | CCGG | 2 cut(s) | 91, 268 |
| Hin1II | CATG | 2 cut(s) | 254, 266 |
| HincII | GTYRAC | 1 cut(s) | 109 |
| HindII | GTYRAC | 1 cut(s) | 109 |
| HpaII | CCGG | 2 cut(s) | 91, 268 |
| Hpy166II | GTNNAC | 4 cut(s) | 109, 215, 273, 297 |
| Hpy188I | TCNGA | 1 cut(s) | 193 |
| Hpy188III | TCNNGA | 2 cut(s) | 53, 146 |
| Hpy8I | GTNNAC | 4 cut(s) | 109, 215, 273, 297 |
| HpyAV | CCTTC | 2 cut(s) | 126, 291 |
| HpyCH4III | ACNGT | 1 cut(s) | 277 |
| HpyCH4IV | ACGT | 1 cut(s) | 124 |
| HpyCH4V | TGCA | 1 cut(s) | 262 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 17 |
| HpyF3I | CTNAG | 1 cut(s) | 231 |
| HpySE526I | ACGT | 1 cut(s) | 124 |
| Hsp92II | CATG | 2 cut(s) | 254, 266 |
| LpnPI | CCDG | 4 cut(s) | 104, 147, 218, 281 |
| MaeII | ACGT | 1 cut(s) | 124 |
| MaeIII | GTNAC | 2 cut(s) | 136, 221 |
| MboII | GAAGA | 1 cut(s) | 266 |
| MluCI | AATT | 1 cut(s) | 150 |
| MnlI | CCTC | 1 cut(s) | 250 |
| MseI | TTAA | 1 cut(s) | 287 |
| MslI | CAYNNNNRTG | 1 cut(s) | 102 |
| MspI | CCGG | 2 cut(s) | 91, 268 |
| MspR9I | CCNGG | 1 cut(s) | 92 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 17 |
| NciI | CCSGG | 1 cut(s) | 92 |
| NlaIII | CATG | 2 cut(s) | 254, 266 |
| NlaIV | GGNNCC | 2 cut(s) | 19, 95 |
| NmuCI | GTSAC | 1 cut(s) | 221 |
| PflFI | GACNNNGTC | 1 cut(s) | 219 |
| PspN4I | GGNNCC | 2 cut(s) | 19, 95 |
| PspPI | GGNCC | 2 cut(s) | 18, 94 |
| PsyI | GACNNNGTC | 1 cut(s) | 219 |
| RsaI | GTAC | 1 cut(s) | 179 |
| RsaNI | GTAC | 1 cut(s) | 178 |
| RseI | CAYNNNNRTG | 1 cut(s) | 102 |
| SaqAI | TTAA | 1 cut(s) | 287 |
| Sau96I | GGNCC | 2 cut(s) | 18, 94 |
| ScrFI | CCNGG | 1 cut(s) | 92 |
| SetI | ASST | 6 cut(s) | 13, 36, 127, 237, 261, 336 |
| SinI | GGWCC | 1 cut(s) | 94 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 102 |
| Sse9I | AATT | 1 cut(s) | 150 |
| StyD4I | CCNGG | 1 cut(s) | 90 |
| TaaI | ACNGT | 1 cut(s) | 277 |
| TaiI | ACGT | 1 cut(s) | 127 |
| TaqI | TCGA | 1 cut(s) | 52 |
| TasI | AATT | 1 cut(s) | 150 |
| Tru1I | TTAA | 1 cut(s) | 287 |
| Tru9I | TTAA | 1 cut(s) | 287 |
| TseFI | GTSAC | 1 cut(s) | 221 |
| Tsp45I | GTSAC | 1 cut(s) | 221 |
| TspDTI | ATGAA | 1 cut(s) | 267 |
| Tth111I | GACNNNGTC | 1 cut(s) | 219 |
| VpaK11BI | GGWCC | 1 cut(s) | 94 |
| XmiI | GTMKAC | 1 cut(s) | 214 |