Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 77 |
| AciI | CCGC | 1 cut(s) | 389 |
| AclWI | GGATC | 1 cut(s) | 308 |
| AcsI | RAATTY | 3 cut(s) | 265, 367, 445 |
| AcyI | GRCGYC | 1 cut(s) | 58 |
| AflIII | ACRYGT | 1 cut(s) | 475 |
| AgsI | TTSAA | 3 cut(s) | 406, 451, 469 |
| AjnI | CCWGG | 1 cut(s) | 372 |
| AluBI | AGCT | 1 cut(s) | 199 |
| AluI | AGCT | 1 cut(s) | 199 |
| AlwI | GGATC | 1 cut(s) | 308 |
| AoxI | GGCC | 1 cut(s) | 276 |
| ApaI | GGGCCC | 1 cut(s) | 280 |
| ApeKI | GCWGC | 1 cut(s) | 199 |
| ApoI | RAATTY | 3 cut(s) | 265, 367, 445 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 227 |
| AspS9I | GGNCC | 2 cut(s) | 276, 277 |
| AsuC2I | CCSGG | 1 cut(s) | 507 |
| BaeGI | GKGCMC | 1 cut(s) | 280 |
| BanII | GRGCYC | 1 cut(s) | 280 |
| BbvI | GCAGC | 1 cut(s) | 186 |
| BccI | CCATC | 2 cut(s) | 14, 300 |
| BciT130I | CCWGG | 1 cut(s) | 374 |
| BcnI | CCSGG | 1 cut(s) | 507 |
| BisI | GCNGC | 1 cut(s) | 200 |
| BlsI | GCNGC | 1 cut(s) | 201 |
| Bme1390I | CCNGG | 2 cut(s) | 374, 507 |
| BmgT120I | GGNCC | 2 cut(s) | 276, 277 |
| BmiI | GGNNCC | 1 cut(s) | 278 |
| BmrFI | CCNGG | 2 cut(s) | 374, 507 |
| BpuMI | CCSGG | 1 cut(s) | 507 |
| BsaHI | GRCGYC | 1 cut(s) | 58 |
| BsaJI | CCNNGG | 3 cut(s) | 159, 260, 373 |
| BseBI | CCWGG | 1 cut(s) | 374 |
| BseDI | CCNNGG | 3 cut(s) | 159, 260, 373 |
| BseGI | GGATG | 1 cut(s) | 311 |
| BseRI | GAGGAG | 2 cut(s) | 176, 200 |
| BseSI | GKGCMC | 1 cut(s) | 280 |
| BseXI | GCAGC | 1 cut(s) | 186 |
| BshFI | GGCC | 1 cut(s) | 278 |
| BsiSI | CCGG | 1 cut(s) | 507 |
| BslFI | GGGAC | 1 cut(s) | 391 |
| BsmFI | GGGAC | 1 cut(s) | 391 |
| BsnI | GGCC | 1 cut(s) | 278 |
| Bsp120I | GGGCCC | 1 cut(s) | 276 |
| Bsp1286I | GDGCHC | 1 cut(s) | 280 |
| Bsp143I | GATC | 3 cut(s) | 271, 313, 453 |
| BspACI | CCGC | 1 cut(s) | 389 |
| BspANI | GGCC | 1 cut(s) | 278 |
| BspLI | GGNNCC | 1 cut(s) | 278 |
| BspPI | GGATC | 1 cut(s) | 308 |
| BspQI | GCTCTTC | 1 cut(s) | 189 |
| BssECI | CCNNGG | 3 cut(s) | 159, 260, 373 |
| BssMI | GATC | 3 cut(s) | 271, 313, 453 |
| BssNI | GRCGYC | 1 cut(s) | 58 |
| BssT1I | CCWWGG | 1 cut(s) | 260 |
| Bst2UI | CCWGG | 1 cut(s) | 374 |
| Bst4CI | ACNGT | 1 cut(s) | 75 |
| Bst6I | CTCTTC | 1 cut(s) | 189 |
| BstACI | GRCGYC | 1 cut(s) | 58 |
| BstC8I | GCNNGC | 2 cut(s) | 26, 204 |
| BstF5I | GGATG | 1 cut(s) | 311 |
| BstKTI | GATC | 3 cut(s) | 274, 316, 456 |
| BstMBI | GATC | 3 cut(s) | 271, 313, 453 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 208 |
| BstNI | CCWGG | 1 cut(s) | 374 |
| BstNSI | RCATGY | 2 cut(s) | 206, 479 |
| BstSCI | CCNGG | 2 cut(s) | 372, 505 |
| BstSLI | GKGCMC | 1 cut(s) | 280 |
| BstV1I | GCAGC | 1 cut(s) | 186 |
| BsuRI | GGCC | 1 cut(s) | 278 |
| BtsCI | GGATG | 1 cut(s) | 311 |
| BtsIMutI | CAGTG | 1 cut(s) | 456 |
| Cac8I | GCNNGC | 2 cut(s) | 26, 204 |
| Cfr13I | GGNCC | 2 cut(s) | 276, 277 |
| CseI | GACGC | 1 cut(s) | 66 |
| CviAII | CATG | 3 cut(s) | 15, 203, 476 |
| CviJI | RGCY | 7 cut(s) | 24, 28, 199, 211, 278, 296, 396 |
| CviKI_1 | RGCY | 7 cut(s) | 24, 28, 199, 211, 278, 296, 396 |
| DpnI | GATC | 3 cut(s) | 273, 315, 455 |
| DpnII | GATC | 3 cut(s) | 271, 313, 453 |
| Eam1104I | CTCTTC | 1 cut(s) | 189 |
| EarI | CTCTTC | 1 cut(s) | 189 |
| Eco130I | CCWWGG | 1 cut(s) | 260 |
| Eco24I | GRGCYC | 1 cut(s) | 280 |
| EcoO109I | RGGNCCY | 1 cut(s) | 277 |
| EcoRII | CCWGG | 1 cut(s) | 372 |
| EcoT14I | CCWWGG | 1 cut(s) | 260 |
| EcoT38I | GRGCYC | 1 cut(s) | 280 |
| ErhI | CCWWGG | 1 cut(s) | 260 |
| FaeI | CATG | 3 cut(s) | 18, 206, 479 |
| FaqI | GGGAC | 1 cut(s) | 391 |
| FatI | CATG | 3 cut(s) | 14, 202, 475 |
| FblI | GTMKAC | 1 cut(s) | 77 |
| Fnu4HI | GCNGC | 1 cut(s) | 200 |
| FokI | GGATG | 1 cut(s) | 318 |
| FriOI | GRGCYC | 1 cut(s) | 280 |
| Fsp4HI | GCNGC | 1 cut(s) | 200 |
| GluI | GCNGC | 1 cut(s) | 200 |
| HaeIII | GGCC | 1 cut(s) | 278 |
| HapII | CCGG | 1 cut(s) | 507 |
| HgaI | GACGC | 1 cut(s) | 66 |
| Hin1I | GRCGYC | 1 cut(s) | 58 |
| Hin1II | CATG | 3 cut(s) | 18, 206, 479 |
| HinfI | GANTC | 5 cut(s) | 104, 129, 155, 254, 335 |
| HpaII | CCGG | 1 cut(s) | 507 |
| Hpy166II | GTNNAC | 1 cut(s) | 78 |
| Hpy188I | TCNGA | 1 cut(s) | 160 |
| Hpy188III | TCNNGA | 1 cut(s) | 126 |
| Hpy8I | GTNNAC | 1 cut(s) | 78 |
| HpyCH4III | ACNGT | 1 cut(s) | 75 |
| HpyCH4V | TGCA | 3 cut(s) | 202, 206, 250 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 208 |
| Hsp92I | GRCGYC | 1 cut(s) | 58 |
| Hsp92II | CATG | 3 cut(s) | 18, 206, 479 |
| Kzo9I | GATC | 3 cut(s) | 271, 313, 453 |
| LguI | GCTCTTC | 1 cut(s) | 189 |
| LpnPI | CCDG | 8 cut(s) | 10, 111, 236, 334, 359, 386, 497, 510 |
| Lsp1109I | GCAGC | 1 cut(s) | 186 |
| MaeIII | GTNAC | 2 cut(s) | 44, 478 |
| MalI | GATC | 3 cut(s) | 273, 315, 455 |
| MboI | GATC | 3 cut(s) | 271, 313, 453 |
| MboII | GAAGA | 2 cut(s) | 206, 463 |
| MhlI | GDGCHC | 1 cut(s) | 280 |
| MluCI | AATT | 4 cut(s) | 243, 265, 367, 445 |
| MlyI | GAGTC | 2 cut(s) | 113, 164 |
| MmeI | TCCRAC | 2 cut(s) | 69, 171 |
| MnlI | CCTC | 5 cut(s) | 154, 157, 178, 231, 290 |
| MroXI | GAANNNNTTC | 1 cut(s) | 227 |
| MseI | TTAA | 1 cut(s) | 177 |
| MspI | CCGG | 1 cut(s) | 507 |
| MspR9I | CCNGG | 2 cut(s) | 374, 507 |
| MvaI | CCWGG | 1 cut(s) | 374 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 208 |
| NciI | CCSGG | 1 cut(s) | 507 |
| NdeII | GATC | 3 cut(s) | 271, 313, 453 |
| NlaIII | CATG | 3 cut(s) | 18, 206, 479 |
| NlaIV | GGNNCC | 1 cut(s) | 278 |
| NspI | RCATGY | 2 cut(s) | 206, 479 |
| PaeI | GCATGC | 1 cut(s) | 206 |
| PciI | ACATGT | 1 cut(s) | 475 |
| PciSI | GCTCTTC | 1 cut(s) | 189 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 309 |
| PdmI | GAANNNNTTC | 1 cut(s) | 227 |
| PfeI | GAWTC | 3 cut(s) | 129, 254, 335 |
| PkrI | GCNGC | 1 cut(s) | 201 |
| PleI | GAGTC | 2 cut(s) | 112, 163 |
| PpsI | GAGTC | 2 cut(s) | 112, 163 |
| PscI | ACATGT | 1 cut(s) | 475 |
| Psp6I | CCWGG | 1 cut(s) | 372 |
| PspGI | CCWGG | 1 cut(s) | 372 |
| PspN4I | GGNNCC | 1 cut(s) | 278 |
| PspOMI | GGGCCC | 1 cut(s) | 276 |
| PspPI | GGNCC | 2 cut(s) | 276, 277 |
| SapI | GCTCTTC | 1 cut(s) | 189 |
| SaqAI | TTAA | 1 cut(s) | 177 |
| SatI | GCNGC | 1 cut(s) | 200 |
| Sau3AI | GATC | 3 cut(s) | 271, 313, 453 |
| Sau96I | GGNCC | 2 cut(s) | 276, 277 |
| SchI | GAGTC | 2 cut(s) | 113, 164 |
| ScrFI | CCNGG | 2 cut(s) | 374, 507 |
| SduI | GDGCHC | 1 cut(s) | 280 |
| SetI | ASST | 4 cut(s) | 168, 183, 201, 331 |
| SphI | GCATGC | 1 cut(s) | 206 |
| Sse9I | AATT | 4 cut(s) | 243, 265, 367, 445 |
| SsiI | CCGC | 1 cut(s) | 389 |
| StyD4I | CCNGG | 2 cut(s) | 372, 505 |
| StyI | CCWWGG | 1 cut(s) | 260 |
| TaaI | ACNGT | 1 cut(s) | 75 |
| TaqI | TCGA | 3 cut(s) | 231, 312, 439 |
| TasI | AATT | 4 cut(s) | 243, 265, 367, 445 |
| TfiI | GAWTC | 3 cut(s) | 129, 254, 335 |
| Tru1I | TTAA | 1 cut(s) | 177 |
| Tru9I | TTAA | 1 cut(s) | 177 |
| TscAI | CASTG | 1 cut(s) | 463 |
| TseI | GCWGC | 1 cut(s) | 199 |
| TspDTI | ATGAA | 1 cut(s) | 236 |
| TspGWI | ACGGA | 2 cut(s) | 318, 330 |
| TspRI | CASTG | 1 cut(s) | 463 |
| XapI | RAATTY | 3 cut(s) | 265, 367, 445 |
| XceI | RCATGY | 2 cut(s) | 206, 479 |
| XmiI | GTMKAC | 1 cut(s) | 77 |
| XmnI | GAANNNNTTC | 1 cut(s) | 227 |