ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 409 |
| Acc36I | ACCTGC | 1 cut(s) | 409 |
| AclWI | GGATC | 2 cut(s) | 74, 335 |
| AcsI | RAATTY | 4 cut(s) | 197, 270, 371, 498 |
| AcuI | CTGAAG | 1 cut(s) | 533 |
| AfaI | GTAC | 2 cut(s) | 88, 481 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 162, 329 |
| AgsI | TTSAA | 1 cut(s) | 247 |
| AjnI | CCWGG | 1 cut(s) | 343 |
| AlwI | GGATC | 2 cut(s) | 74, 335 |
| ApoI | RAATTY | 4 cut(s) | 197, 270, 371, 498 |
| AsuHPI | GGTGA | 2 cut(s) | 269, 485 |
| BauI | CACGAG | 1 cut(s) | 35 |
| BbsI | GAAGAC | 1 cut(s) | 521 |
| BccI | CCATC | 2 cut(s) | 323, 470 |
| BceAI | ACGGC | 1 cut(s) | 44 |
| BciT130I | CCWGG | 1 cut(s) | 345 |
| BfaI | CTAG | 2 cut(s) | 387, 461 |
| BfuAI | ACCTGC | 1 cut(s) | 409 |
| BglII | AGATCT | 1 cut(s) | 177 |
| Bme1390I | CCNGG | 1 cut(s) | 345 |
| BmrFI | CCNGG | 1 cut(s) | 345 |
| BmrI | ACTGGG | 1 cut(s) | 223 |
| BmuI | ACTGGG | 1 cut(s) | 223 |
| BoxI | GACNNNNGTC | 1 cut(s) | 225 |
| BpiI | GAAGAC | 1 cut(s) | 521 |
| Bpu10I | CCTNAGC | 1 cut(s) | 405 |
| BsaJI | CCNNGG | 2 cut(s) | 287, 344 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 162, 329 |
| Bse1I | ACTGG | 3 cut(s) | 218, 475, 487 |
| Bse3DI | GCAATG | 1 cut(s) | 147 |
| BseBI | CCWGG | 1 cut(s) | 345 |
| BseDI | CCNNGG | 2 cut(s) | 287, 344 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 162, 329 |
| BseMI | GCAATG | 1 cut(s) | 147 |
| BseNI | ACTGG | 3 cut(s) | 218, 475, 487 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 162, 329 |
| Bsp143I | GATC | 4 cut(s) | 79, 177, 340, 457 |
| Bsp19I | CCATGG | 1 cut(s) | 287 |
| BspHI | TCATGA | 1 cut(s) | 43 |
| BspMI | ACCTGC | 1 cut(s) | 409 |
| BspPI | GGATC | 2 cut(s) | 74, 335 |
| BsrDI | GCAATG | 1 cut(s) | 147 |
| BsrI | ACTGG | 3 cut(s) | 218, 475, 487 |
| BssECI | CCNNGG | 2 cut(s) | 287, 344 |
| BssMI | GATC | 4 cut(s) | 79, 177, 340, 457 |
| BssSI | CACGAG | 1 cut(s) | 35 |
| BssT1I | CCWWGG | 1 cut(s) | 287 |
| Bst2BI | CACGAG | 1 cut(s) | 35 |
| Bst2UI | CCWGG | 1 cut(s) | 345 |
| Bst4CI | ACNGT | 3 cut(s) | 302, 364, 528 |
| BstDEI | CTNAG | 1 cut(s) | 405 |
| BstDSI | CCRYGG | 1 cut(s) | 287 |
| BstKTI | GATC | 4 cut(s) | 82, 180, 343, 460 |
| BstMBI | GATC | 4 cut(s) | 79, 177, 340, 457 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 37, 311 |
| BstNI | CCWGG | 1 cut(s) | 345 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 225 |
| BstSCI | CCNGG | 1 cut(s) | 343 |
| BstV2I | GAAGAC | 1 cut(s) | 521 |
| BstX2I | RGATCY | 2 cut(s) | 79, 177 |
| BstYI | RGATCY | 2 cut(s) | 79, 177 |
| BtgI | CCRYGG | 1 cut(s) | 287 |
| BtsIMutI | CAGTG | 1 cut(s) | 307 |
| BveI | ACCTGC | 1 cut(s) | 409 |
| CciI | TCATGA | 1 cut(s) | 43 |
| Csp6I | GTAC | 2 cut(s) | 87, 480 |
| CviAII | CATG | 2 cut(s) | 44, 288 |
| CviJI | RGCY | 4 cut(s) | 112, 314, 394, 511 |
| CviKI_1 | RGCY | 4 cut(s) | 112, 314, 394, 511 |
| CviQI | GTAC | 2 cut(s) | 87, 480 |
| DdeI | CTNAG | 1 cut(s) | 405 |
| DpnI | GATC | 4 cut(s) | 81, 179, 342, 459 |
| DpnII | GATC | 4 cut(s) | 79, 177, 340, 457 |
| Eco130I | CCWWGG | 1 cut(s) | 287 |
| Eco57I | CTGAAG | 1 cut(s) | 533 |
| EcoRI | GAATTC | 2 cut(s) | 270, 498 |
| EcoRII | CCWGG | 1 cut(s) | 343 |
| EcoT14I | CCWWGG | 1 cut(s) | 287 |
| ErhI | CCWWGG | 1 cut(s) | 287 |
| FaeI | CATG | 2 cut(s) | 47, 291 |
| FaiI | YATR | 5 cut(s) | 45, 95, 289, 447, 548 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 140, 172 |
| FatI | CATG | 2 cut(s) | 43, 287 |
| FspBI | CTAG | 2 cut(s) | 387, 461 |
| Hin1II | CATG | 2 cut(s) | 47, 291 |
| HinfI | GANTC | 5 cut(s) | 33, 105, 152, 221, 379 |
| HphI | GGTGA | 2 cut(s) | 269, 485 |
| Hpy166II | GTNNAC | 1 cut(s) | 524 |
| Hpy188I | TCNGA | 4 cut(s) | 84, 253, 328, 420 |
| Hpy188III | TCNNGA | 4 cut(s) | 44, 181, 209, 376 |
| Hpy8I | GTNNAC | 1 cut(s) | 524 |
| HpyAV | CCTTC | 2 cut(s) | 184, 423 |
| HpyCH4III | ACNGT | 3 cut(s) | 302, 364, 528 |
| HpyCH4V | TGCA | 1 cut(s) | 367 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 37, 311 |
| HpyF3I | CTNAG | 1 cut(s) | 405 |
| Hsp92II | CATG | 2 cut(s) | 47, 291 |
| Kzo9I | GATC | 4 cut(s) | 79, 177, 340, 457 |
| LmnI | GCTCC | 1 cut(s) | 325 |
| MaeI | CTAG | 2 cut(s) | 387, 461 |
| MaeIII | GTNAC | 2 cut(s) | 67, 466 |
| MalI | GATC | 4 cut(s) | 81, 179, 342, 459 |
| MboI | GATC | 4 cut(s) | 79, 177, 340, 457 |
| MboII | GAAGA | 5 cut(s) | 89, 187, 206, 433, 526 |
| MflI | RGATCY | 2 cut(s) | 79, 177 |
| MluCI | AATT | 4 cut(s) | 197, 270, 371, 498 |
| MlyI | GAGTC | 3 cut(s) | 27, 146, 215 |
| MmeI | TCCRAC | 1 cut(s) | 231 |
| MnlI | CCTC | 5 cut(s) | 43, 165, 211, 247, 525 |
| MspR9I | CCNGG | 1 cut(s) | 345 |
| MvaI | CCWGG | 1 cut(s) | 345 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 37, 311 |
| NcoI | CCATGG | 1 cut(s) | 287 |
| NdeII | GATC | 4 cut(s) | 79, 177, 340, 457 |
| NlaIII | CATG | 2 cut(s) | 47, 291 |
| PagI | TCATGA | 1 cut(s) | 43 |
| PaqCI | CACCTGC | 1 cut(s) | 409 |
| PfeI | GAWTC | 2 cut(s) | 105, 379 |
| PleI | GAGTC | 3 cut(s) | 27, 146, 215 |
| PpsI | GAGTC | 3 cut(s) | 27, 146, 215 |
| PshAI | GACNNNNGTC | 1 cut(s) | 225 |
| Psp6I | CCWGG | 1 cut(s) | 343 |
| PspGI | CCWGG | 1 cut(s) | 343 |
| PsuI | RGATCY | 2 cut(s) | 79, 177 |
| RsaI | GTAC | 2 cut(s) | 88, 481 |
| RsaNI | GTAC | 2 cut(s) | 87, 480 |
| Sau3AI | GATC | 4 cut(s) | 79, 177, 340, 457 |
| SchI | GAGTC | 3 cut(s) | 27, 146, 215 |
| ScrFI | CCNGG | 1 cut(s) | 345 |
| SetI | ASST | 5 cut(s) | 12, 121, 126, 403, 541 |
| Sse9I | AATT | 4 cut(s) | 197, 270, 371, 498 |
| SspMI | CTAG | 2 cut(s) | 387, 461 |
| StyD4I | CCNGG | 1 cut(s) | 343 |
| StyI | CCWWGG | 1 cut(s) | 287 |
| TaaI | ACNGT | 3 cut(s) | 302, 364, 528 |
| TaqI | TCGA | 2 cut(s) | 75, 339 |
| TasI | AATT | 4 cut(s) | 197, 270, 371, 498 |
| TfiI | GAWTC | 2 cut(s) | 105, 379 |
| TscAI | CASTG | 1 cut(s) | 307 |
| TspDTI | ATGAA | 2 cut(s) | 32, 158 |
| TspGWI | ACGGA | 1 cut(s) | 312 |
| TspRI | CASTG | 1 cut(s) | 307 |
| XapI | RAATTY | 4 cut(s) | 197, 270, 371, 498 |
| XspI | CTAG | 2 cut(s) | 387, 461 |