ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 401, 593 |
| AccI | GTMKAC | 1 cut(s) | 647 |
| AciI | CCGC | 6 cut(s) | 132, 242, 320, 434, 512, 674 |
| AclWI | GGATC | 4 cut(s) | 295, 308, 487, 500 |
| AfaI | GTAC | 1 cut(s) | 229 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 310, 401, 502, 593 |
| AgsI | TTSAA | 2 cut(s) | 172, 619 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 95, 127 |
| Alw26I | GTCTC | 1 cut(s) | 189 |
| AlwI | GGATC | 4 cut(s) | 295, 308, 487, 500 |
| Ama87I | CYCGRG | 1 cut(s) | 201 |
| AoxI | GGCC | 1 cut(s) | 681 |
| AspA2I | CCTAGG | 1 cut(s) | 695 |
| AspLEI | GCGC | 2 cut(s) | 40, 58 |
| AsuC2I | CCSGG | 3 cut(s) | 83, 202, 203 |
| AvaI | CYCGRG | 1 cut(s) | 201 |
| AvrII | CCTAGG | 1 cut(s) | 695 |
| BamHI | GGATCC | 2 cut(s) | 300, 492 |
| BccI | CCATC | 4 cut(s) | 154, 245, 437, 664 |
| BceAI | ACGGC | 1 cut(s) | 237 |
| BcnI | CCSGG | 3 cut(s) | 83, 202, 203 |
| BcoDI | GTCTC | 1 cut(s) | 189 |
| BfaI | CTAG | 1 cut(s) | 696 |
| BfoI | RGCGCY | 1 cut(s) | 41 |
| BisI | GCNGC | 2 cut(s) | 243, 435 |
| BlnI | CCTAGG | 1 cut(s) | 695 |
| BlsI | GCNGC | 2 cut(s) | 244, 436 |
| Bme1390I | CCNGG | 3 cut(s) | 83, 202, 203 |
| BmeT110I | CYCGRG | 1 cut(s) | 201 |
| BmiI | GGNNCC | 5 cut(s) | 302, 318, 494, 510, 624 |
| BmrFI | CCNGG | 3 cut(s) | 83, 202, 203 |
| BmsI | GCATC | 1 cut(s) | 625 |
| BpuMI | CCSGG | 3 cut(s) | 83, 202, 203 |
| BsaI | GGTCTC | 1 cut(s) | 189 |
| BsaJI | CCNNGG | 4 cut(s) | 200, 201, 202, 695 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 310, 401, 502, 593 |
| Bse1I | ACTGG | 2 cut(s) | 213, 722 |
| BseDI | CCNNGG | 4 cut(s) | 200, 201, 202, 695 |
| BseGI | GGATG | 4 cut(s) | 394, 586, 675, 731 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 310, 401, 502, 593 |
| BseNI | ACTGG | 2 cut(s) | 213, 722 |
| BshFI | GGCC | 1 cut(s) | 683 |
| BsiHKCI | CYCGRG | 1 cut(s) | 201 |
| BsiSI | CCGG | 2 cut(s) | 83, 202 |
| BslFI | GGGAC | 1 cut(s) | 178 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 310, 401, 502, 593 |
| BsmAI | GTCTC | 1 cut(s) | 189 |
| BsmFI | GGGAC | 1 cut(s) | 178 |
| BsnI | GGCC | 1 cut(s) | 683 |
| Bso31I | GGTCTC | 1 cut(s) | 189 |
| BsoBI | CYCGRG | 1 cut(s) | 201 |
| Bsp143I | GATC | 4 cut(s) | 262, 300, 454, 492 |
| BspACI | CCGC | 6 cut(s) | 132, 242, 320, 434, 512, 674 |
| BspANI | GGCC | 1 cut(s) | 683 |
| BspLI | GGNNCC | 5 cut(s) | 302, 318, 494, 510, 624 |
| BspPI | GGATC | 4 cut(s) | 295, 308, 487, 500 |
| BspQI | GCTCTTC | 1 cut(s) | 696 |
| BspTNI | GGTCTC | 1 cut(s) | 189 |
| BsrI | ACTGG | 2 cut(s) | 213, 722 |
| BssECI | CCNNGG | 4 cut(s) | 200, 201, 202, 695 |
| BssMI | GATC | 4 cut(s) | 262, 300, 454, 492 |
| BssT1I | CCWWGG | 1 cut(s) | 695 |
| Bst4CI | ACNGT | 2 cut(s) | 519, 630 |
| Bst6I | CTCTTC | 1 cut(s) | 696 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 425 |
| BstC8I | GCNNGC | 3 cut(s) | 36, 210, 681 |
| BstF5I | GGATG | 4 cut(s) | 394, 586, 675, 731 |
| BstH2I | RGCGCY | 1 cut(s) | 41 |
| BstHHI | GCGC | 2 cut(s) | 40, 58 |
| BstKTI | GATC | 4 cut(s) | 265, 303, 457, 495 |
| BstMAI | GTCTC | 1 cut(s) | 189 |
| BstMBI | GATC | 4 cut(s) | 262, 300, 454, 492 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 286, 425, 434, 478, 680 |
| BstSCI | CCNGG | 3 cut(s) | 81, 200, 201 |
| BstX2I | RGATCY | 2 cut(s) | 300, 492 |
| BstYI | RGATCY | 2 cut(s) | 300, 492 |
| BsuRI | GGCC | 1 cut(s) | 683 |
| BtsCI | GGATG | 4 cut(s) | 394, 586, 675, 731 |
| BtsI | GCAGTG | 1 cut(s) | 435 |
| BtsIMutI | CAGTG | 3 cut(s) | 220, 435, 515 |
| Cac8I | GCNNGC | 3 cut(s) | 36, 210, 681 |
| CfoI | GCGC | 2 cut(s) | 40, 58 |
| Cfr9I | CCCGGG | 1 cut(s) | 201 |
| Csp6I | GTAC | 1 cut(s) | 228 |
| CviAII | CATG | 4 cut(s) | 309, 401, 501, 593 |
| CviJI | RGCY | 9 cut(s) | 34, 97, 124, 139, 176, 212, 224, 683, 713 |
| CviKI_1 | RGCY | 9 cut(s) | 34, 97, 124, 139, 176, 212, 224, 683, 713 |
| CviQI | GTAC | 1 cut(s) | 228 |
| DpnI | GATC | 4 cut(s) | 264, 302, 456, 494 |
| DpnII | GATC | 4 cut(s) | 262, 300, 454, 492 |
| Eam1104I | CTCTTC | 1 cut(s) | 696 |
| EarI | CTCTTC | 1 cut(s) | 696 |
| EciI | GGCGGA | 3 cut(s) | 309, 501, 689 |
| Eco130I | CCWWGG | 1 cut(s) | 695 |
| Eco31I | GGTCTC | 1 cut(s) | 189 |
| Eco88I | CYCGRG | 1 cut(s) | 201 |
| EcoT14I | CCWWGG | 1 cut(s) | 695 |
| ErhI | CCWWGG | 1 cut(s) | 695 |
| FaeI | CATG | 4 cut(s) | 312, 404, 504, 596 |
| FaqI | GGGAC | 1 cut(s) | 178 |
| FatI | CATG | 4 cut(s) | 308, 400, 500, 592 |
| FblI | GTMKAC | 1 cut(s) | 647 |
| Fnu4HI | GCNGC | 2 cut(s) | 243, 435 |
| FokI | GGATG | 3 cut(s) | 401, 593, 682 |
| Fsp4HI | GCNGC | 2 cut(s) | 243, 435 |
| FspBI | CTAG | 1 cut(s) | 696 |
| GlaI | GCGC | 2 cut(s) | 39, 57 |
| GluI | GCNGC | 2 cut(s) | 243, 435 |
| HaeII | RGCGCY | 1 cut(s) | 41 |
| HaeIII | GGCC | 1 cut(s) | 683 |
| HapII | CCGG | 2 cut(s) | 83, 202 |
| HhaI | GCGC | 2 cut(s) | 40, 58 |
| Hin1II | CATG | 4 cut(s) | 312, 404, 504, 596 |
| Hin6I | GCGC | 2 cut(s) | 38, 56 |
| HinP1I | GCGC | 2 cut(s) | 38, 56 |
| HincII | GTYRAC | 1 cut(s) | 648 |
| HindII | GTYRAC | 1 cut(s) | 648 |
| HpaII | CCGG | 2 cut(s) | 83, 202 |
| Hpy166II | GTNNAC | 1 cut(s) | 648 |
| Hpy188I | TCNGA | 1 cut(s) | 29 |
| Hpy188III | TCNNGA | 2 cut(s) | 358, 550 |
| Hpy8I | GTNNAC | 1 cut(s) | 648 |
| Hpy99I | CGWCG | 1 cut(s) | 652 |
| HpyAV | CCTTC | 6 cut(s) | 24, 166, 331, 523, 613, 651 |
| HpyCH4III | ACNGT | 2 cut(s) | 519, 630 |
| HpyCH4V | TGCA | 3 cut(s) | 308, 428, 500 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 286, 425, 434, 478, 680 |
| Hsp92II | CATG | 4 cut(s) | 312, 404, 504, 596 |
| HspAI | GCGC | 2 cut(s) | 38, 56 |
| Kzo9I | GATC | 4 cut(s) | 262, 300, 454, 492 |
| LguI | GCTCTTC | 1 cut(s) | 696 |
| LmnI | GCTCC | 1 cut(s) | 676 |
| LweI | GCATC | 1 cut(s) | 625 |
| MaeI | CTAG | 1 cut(s) | 696 |
| MaeIII | GTNAC | 1 cut(s) | 217 |
| MalI | GATC | 4 cut(s) | 264, 302, 456, 494 |
| MboI | GATC | 4 cut(s) | 262, 300, 454, 492 |
| MboII | GAAGA | 2 cut(s) | 17, 713 |
| MflI | RGATCY | 2 cut(s) | 300, 492 |
| MluCI | AATT | 3 cut(s) | 11, 283, 475 |
| MnlI | CCTC | 6 cut(s) | 46, 55, 114, 145, 229, 703 |
| MspI | CCGG | 2 cut(s) | 83, 202 |
| MspR9I | CCNGG | 3 cut(s) | 83, 202, 203 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 286, 425, 434, 478, 680 |
| NciI | CCSGG | 3 cut(s) | 83, 202, 203 |
| NdeII | GATC | 4 cut(s) | 262, 300, 454, 492 |
| NlaIII | CATG | 4 cut(s) | 312, 404, 504, 596 |
| NlaIV | GGNNCC | 5 cut(s) | 302, 318, 494, 510, 624 |
| NmuCI | GTSAC | 1 cut(s) | 217 |
| PciSI | GCTCTTC | 1 cut(s) | 696 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 401, 593 |
| PkrI | GCNGC | 2 cut(s) | 244, 436 |
| PspN4I | GGNNCC | 5 cut(s) | 302, 318, 494, 510, 624 |
| PsuI | RGATCY | 2 cut(s) | 300, 492 |
| RsaI | GTAC | 1 cut(s) | 229 |
| RsaNI | GTAC | 1 cut(s) | 228 |
| SalI | GTCGAC | 1 cut(s) | 646 |
| SapI | GCTCTTC | 1 cut(s) | 696 |
| SatI | GCNGC | 2 cut(s) | 243, 435 |
| Sau3AI | GATC | 4 cut(s) | 262, 300, 454, 492 |
| ScrFI | CCNGG | 3 cut(s) | 83, 202, 203 |
| SetI | ASST | 3 cut(s) | 66, 240, 697 |
| SfaNI | GCATC | 1 cut(s) | 625 |
| SmaI | CCCGGG | 1 cut(s) | 203 |
| Sse9I | AATT | 3 cut(s) | 11, 283, 475 |
| SsiI | CCGC | 6 cut(s) | 132, 242, 320, 434, 512, 674 |
| SspMI | CTAG | 1 cut(s) | 696 |
| StyD4I | CCNGG | 3 cut(s) | 81, 200, 201 |
| StyI | CCWWGG | 1 cut(s) | 695 |
| TaaI | ACNGT | 2 cut(s) | 519, 630 |
| TaqI | TCGA | 2 cut(s) | 647, 691 |
| TasI | AATT | 3 cut(s) | 11, 283, 475 |
| TatI | WGTACW | 1 cut(s) | 227 |
| TauI | GCSGC | 2 cut(s) | 245, 437 |
| TscAI | CASTG | 3 cut(s) | 220, 435, 522 |
| TseFI | GTSAC | 1 cut(s) | 217 |
| Tsp45I | GTSAC | 1 cut(s) | 217 |
| TspDTI | ATGAA | 2 cut(s) | 405, 597 |
| TspGWI | ACGGA | 3 cut(s) | 293, 485, 665 |
| TspMI | CCCGGG | 1 cut(s) | 201 |
| TspRI | CASTG | 3 cut(s) | 220, 435, 522 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 401, 593 |
| XmaI | CCCGGG | 1 cut(s) | 201 |
| XmaJI | CCTAGG | 1 cut(s) | 695 |
| XmiI | GTMKAC | 1 cut(s) | 647 |
| XspI | CTAG | 1 cut(s) | 696 |