DNA (cytosine-5)-methyltransferase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 204 |
| AciI | CCGC | 2 cut(s) | 863, 890 |
| AcsI | RAATTY | 2 cut(s) | 182, 899 |
| AcuI | CTGAAG | 3 cut(s) | 200, 305, 599 |
| AfaI | GTAC | 1 cut(s) | 601 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 734 |
| AgsI | TTSAA | 2 cut(s) | 331, 628 |
| AjnI | CCWGG | 5 cut(s) | 119, 230, 706, 727, 866 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 226, 258 |
| Alw21I | GWGCWC | 3 cut(s) | 39, 239, 642 |
| Alw26I | GTCTC | 1 cut(s) | 80 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 608 |
| AoxI | GGCC | 2 cut(s) | 864, 947 |
| ApeKI | GCWGC | 2 cut(s) | 334, 548 |
| ApoI | RAATTY | 2 cut(s) | 182, 899 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 674, 678, 706, 710 |
| AspS9I | GGNCC | 3 cut(s) | 140, 725, 948 |
| AvaII | GGWCC | 2 cut(s) | 140, 725 |
| BanII | GRGCYC | 5 cut(s) | 39, 239, 274, 436, 642 |
| BbsI | GAAGAC | 2 cut(s) | 15, 879 |
| Bbv12I | GWGCWC | 3 cut(s) | 39, 239, 642 |
| BbvI | GCAGC | 2 cut(s) | 321, 560 |
| BccI | CCATC | 3 cut(s) | 495, 796, 908 |
| BciT130I | CCWGG | 5 cut(s) | 121, 232, 708, 729, 868 |
| BcoDI | GTCTC | 1 cut(s) | 80 |
| BfaI | CTAG | 1 cut(s) | 659 |
| BfmI | CTRYAG | 1 cut(s) | 667 |
| BisI | GCNGC | 3 cut(s) | 335, 549, 864 |
| BlsI | GCNGC | 3 cut(s) | 336, 550, 865 |
| Bme1390I | CCNGG | 5 cut(s) | 121, 232, 708, 729, 868 |
| Bme18I | GGWCC | 2 cut(s) | 140, 725 |
| BmgT120I | GGNCC | 3 cut(s) | 140, 725, 948 |
| BmiI | GGNNCC | 2 cut(s) | 433, 950 |
| BmrFI | CCNGG | 5 cut(s) | 121, 232, 708, 729, 868 |
| BmsI | GCATC | 5 cut(s) | 37, 210, 479, 546, 850 |
| BoxI | GACNNNNGTC | 1 cut(s) | 285 |
| BpiI | GAAGAC | 2 cut(s) | 15, 879 |
| Bpu10I | CCTNAGC | 2 cut(s) | 238, 636 |
| BpuEI | CTTGAG | 2 cut(s) | 507, 551 |
| BsaBI | GATNNNNATC | 1 cut(s) | 224 |
| BsaI | GGTCTC | 1 cut(s) | 80 |
| BsaJI | CCNNGG | 6 cut(s) | 104, 120, 402, 706, 707, 867 |
| BsaWI | WCCGGW | 1 cut(s) | 186 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 226, 256 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 734 |
| Bse1I | ACTGG | 1 cut(s) | 84 |
| Bse3DI | GCAATG | 2 cut(s) | 179, 745 |
| Bse8I | GATNNNNATC | 1 cut(s) | 224 |
| BseBI | CCWGG | 5 cut(s) | 121, 232, 708, 729, 868 |
| BseDI | CCNNGG | 6 cut(s) | 104, 120, 402, 706, 707, 867 |
| BseGI | GGATG | 4 cut(s) | 37, 506, 757, 898 |
| BseJI | GATNNNNATC | 1 cut(s) | 224 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 734 |
| BseMI | GCAATG | 2 cut(s) | 179, 745 |
| BseMII | CTCAG | 4 cut(s) | 209, 252, 627, 783 |
| BseNI | ACTGG | 1 cut(s) | 84 |
| BseXI | GCAGC | 2 cut(s) | 321, 560 |
| BseYI | CCCAGC | 3 cut(s) | 248, 747, 935 |
| BsgI | GTGCAG | 2 cut(s) | 366, 423 |
| Bsh1285I | CGRYCG | 1 cut(s) | 191 |
| BshFI | GGCC | 2 cut(s) | 866, 949 |
| BsiEI | CGRYCG | 1 cut(s) | 191 |
| BsiHKAI | GWGCWC | 3 cut(s) | 39, 239, 642 |
| BsiSI | CCGG | 1 cut(s) | 187 |
| BslFI | GGGAC | 1 cut(s) | 809 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 734 |
| BsmAI | GTCTC | 1 cut(s) | 80 |
| BsmFI | GGGAC | 1 cut(s) | 809 |
| BsmI | GAATGC | 1 cut(s) | 216 |
| BsnI | GGCC | 2 cut(s) | 866, 949 |
| Bso31I | GGTCTC | 1 cut(s) | 80 |
| Bsp1286I | GDGCHC | 5 cut(s) | 39, 239, 274, 436, 642 |
| Bsp143I | GATC | 1 cut(s) | 877 |
| BspACI | CCGC | 2 cut(s) | 863, 890 |
| BspANI | GGCC | 2 cut(s) | 866, 949 |
| BspCNI | CTCAG | 4 cut(s) | 208, 251, 628, 782 |
| BspLI | GGNNCC | 2 cut(s) | 433, 950 |
| BspTNI | GGTCTC | 1 cut(s) | 80 |
| BsrDI | GCAATG | 2 cut(s) | 179, 745 |
| BsrI | ACTGG | 1 cut(s) | 84 |
| BssECI | CCNNGG | 6 cut(s) | 104, 120, 402, 706, 707, 867 |
| BssMI | GATC | 1 cut(s) | 877 |
| BssT1I | CCWWGG | 2 cut(s) | 104, 402 |
| Bst2UI | CCWGG | 5 cut(s) | 121, 232, 708, 729, 868 |
| Bst4CI | ACNGT | 5 cut(s) | 14, 97, 464, 632, 671 |
| Bst6I | CTCTTC | 3 cut(s) | 78, 121, 324 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 258, 308 |
| BstC8I | GCNNGC | 2 cut(s) | 152, 254 |
| BstDEI | CTNAG | 5 cut(s) | 195, 238, 636, 769, 787 |
| BstF5I | GGATG | 4 cut(s) | 37, 506, 757, 898 |
| BstKTI | GATC | 1 cut(s) | 880 |
| BstMAI | GTCTC | 1 cut(s) | 80 |
| BstMBI | GATC | 1 cut(s) | 877 |
| BstMCI | CGRYCG | 1 cut(s) | 191 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 220, 253, 258, 308, 446, 548, 744 |
| BstNI | CCWGG | 5 cut(s) | 121, 232, 708, 729, 868 |
| BstNSI | RCATGY | 1 cut(s) | 496 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 285 |
| BstSCI | CCNGG | 5 cut(s) | 119, 230, 706, 727, 866 |
| BstSFI | CTRYAG | 1 cut(s) | 667 |
| BstV1I | GCAGC | 2 cut(s) | 321, 560 |
| BstV2I | GAAGAC | 2 cut(s) | 15, 879 |
| BsuRI | GGCC | 2 cut(s) | 866, 949 |
| BtsCI | GGATG | 4 cut(s) | 37, 506, 757, 898 |
| BtsIMutI | CAGTG | 4 cut(s) | 19, 77, 460, 676 |
| Cac8I | GCNNGC | 2 cut(s) | 152, 254 |
| CaiI | CAGNNNCTG | 1 cut(s) | 608 |
| Cfr13I | GGNCC | 3 cut(s) | 140, 725, 948 |
| CseI | GACGC | 1 cut(s) | 455 |
| CsiI | ACCWGGT | 1 cut(s) | 727 |
| Csp6I | GTAC | 1 cut(s) | 600 |
| CviAII | CATG | 2 cut(s) | 308, 493 |
| CviQI | GTAC | 1 cut(s) | 600 |
| DdeI | CTNAG | 5 cut(s) | 195, 238, 636, 769, 787 |
| DpnI | GATC | 1 cut(s) | 879 |
| DpnII | GATC | 1 cut(s) | 877 |
| Eam1104I | CTCTTC | 3 cut(s) | 78, 121, 324 |
| EarI | CTCTTC | 3 cut(s) | 78, 121, 324 |
| EciI | GGCGGA | 1 cut(s) | 905 |
| Ecl136II | GAGCTC | 3 cut(s) | 37, 237, 640 |
| Eco130I | CCWWGG | 2 cut(s) | 104, 402 |
| Eco24I | GRGCYC | 5 cut(s) | 39, 239, 274, 436, 642 |
| Eco31I | GGTCTC | 1 cut(s) | 80 |
| Eco47I | GGWCC | 2 cut(s) | 140, 725 |
| Eco53kI | GAGCTC | 3 cut(s) | 37, 237, 640 |
| Eco57I | CTGAAG | 3 cut(s) | 200, 305, 599 |
| EcoICRI | GAGCTC | 3 cut(s) | 37, 237, 640 |
| EcoRII | CCWGG | 5 cut(s) | 119, 230, 706, 727, 866 |
| EcoT14I | CCWWGG | 2 cut(s) | 104, 402 |
| EcoT22I | ATGCAT | 1 cut(s) | 494 |
| EcoT38I | GRGCYC | 5 cut(s) | 39, 239, 274, 436, 642 |
| ErhI | CCWWGG | 2 cut(s) | 104, 402 |
| FaeI | CATG | 2 cut(s) | 311, 496 |
| FaqI | GGGAC | 1 cut(s) | 809 |
| FatI | CATG | 2 cut(s) | 307, 492 |
| FblI | GTMKAC | 1 cut(s) | 204 |
| Fnu4HI | GCNGC | 3 cut(s) | 335, 549, 864 |
| FokI | GGATG | 4 cut(s) | 44, 513, 764, 905 |
| FriOI | GRGCYC | 5 cut(s) | 39, 239, 274, 436, 642 |
| Fsp4HI | GCNGC | 3 cut(s) | 335, 549, 864 |
| FspBI | CTAG | 1 cut(s) | 659 |
| GluI | GCNGC | 3 cut(s) | 335, 549, 864 |
| GsaI | CCCAGC | 3 cut(s) | 252, 751, 939 |
| HaeIII | GGCC | 2 cut(s) | 866, 949 |
| HapII | CCGG | 1 cut(s) | 187 |
| HgaI | GACGC | 1 cut(s) | 455 |
| Hin1II | CATG | 2 cut(s) | 311, 496 |
| HindIII | AAGCTT | 1 cut(s) | 383 |
| HinfI | GANTC | 3 cut(s) | 70, 286, 518 |
| HpaII | CCGG | 1 cut(s) | 187 |
| Hpy166II | GTNNAC | 2 cut(s) | 205, 467 |
| Hpy188I | TCNGA | 5 cut(s) | 24, 198, 219, 324, 618 |
| Hpy188III | TCNNGA | 5 cut(s) | 275, 524, 635, 697, 926 |
| Hpy8I | GTNNAC | 2 cut(s) | 205, 467 |
| HpyCH4III | ACNGT | 5 cut(s) | 14, 97, 464, 632, 671 |
| HpyCH4IV | ACGT | 2 cut(s) | 326, 654 |
| HpyCH4V | TGCA | 9 cut(s) | 50, 114, 172, 347, 420, 440, 484, 492, 542 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 220, 253, 258, 308, 446, 548, 744 |
| HpyF3I | CTNAG | 5 cut(s) | 195, 238, 636, 769, 787 |
| HpySE526I | ACGT | 2 cut(s) | 326, 654 |
| Hsp92II | CATG | 2 cut(s) | 311, 496 |
| Kzo9I | GATC | 1 cut(s) | 877 |
| LmnI | GCTCC | 5 cut(s) | 177, 234, 431, 645, 764 |
| Lsp1109I | GCAGC | 2 cut(s) | 321, 560 |
| LweI | GCATC | 5 cut(s) | 37, 210, 479, 546, 850 |
| MabI | ACCWGGT | 1 cut(s) | 727 |
| MaeI | CTAG | 1 cut(s) | 659 |
| MaeII | ACGT | 2 cut(s) | 326, 654 |
| MalI | GATC | 1 cut(s) | 879 |
| MboI | GATC | 1 cut(s) | 877 |
| MboII | GAAGA | 7 cut(s) | 20, 95, 138, 311, 768, 869, 884 |
| MfeI | CAATTG | 1 cut(s) | 450 |
| MhlI | GDGCHC | 5 cut(s) | 39, 239, 274, 436, 642 |
| MluCI | AATT | 5 cut(s) | 25, 182, 450, 678, 899 |
| MlyI | GAGTC | 2 cut(s) | 295, 512 |
| MmeI | TCCRAC | 1 cut(s) | 703 |
| MnlI | CCTC | 3 cut(s) | 204, 526, 826 |
| Mph1103I | ATGCAT | 1 cut(s) | 494 |
| MseI | TTAA | 4 cut(s) | 66, 162, 410, 650 |
| MspI | CCGG | 1 cut(s) | 187 |
| MspR9I | CCNGG | 5 cut(s) | 121, 232, 708, 729, 868 |
| MunI | CAATTG | 1 cut(s) | 450 |
| Mva1269I | GAATGC | 1 cut(s) | 216 |
| MvaI | CCWGG | 5 cut(s) | 121, 232, 708, 729, 868 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 220, 253, 258, 308, 446, 548, 744 |
| NdeII | GATC | 1 cut(s) | 877 |
| NlaIII | CATG | 2 cut(s) | 311, 496 |
| NlaIV | GGNNCC | 2 cut(s) | 433, 950 |
| NsiI | ATGCAT | 1 cut(s) | 494 |
| NspI | RCATGY | 1 cut(s) | 496 |
| PasI | CCCWGGG | 1 cut(s) | 707 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 589 |
| PctI | GAATGC | 1 cut(s) | 216 |
| PfeI | GAWTC | 1 cut(s) | 70 |
| PkrI | GCNGC | 3 cut(s) | 336, 550, 865 |
| PleI | GAGTC | 2 cut(s) | 294, 512 |
| PpsI | GAGTC | 2 cut(s) | 294, 512 |
| PshAI | GACNNNNGTC | 1 cut(s) | 285 |
| Psp124BI | GAGCTC | 3 cut(s) | 39, 239, 642 |
| Psp6I | CCWGG | 5 cut(s) | 119, 230, 706, 727, 866 |
| PspFI | CCCAGC | 3 cut(s) | 248, 747, 935 |
| PspGI | CCWGG | 5 cut(s) | 119, 230, 706, 727, 866 |
| PspN4I | GGNNCC | 2 cut(s) | 433, 950 |
| PspPI | GGNCC | 3 cut(s) | 140, 725, 948 |
| PstNI | CAGNNNCTG | 1 cut(s) | 608 |
| RsaI | GTAC | 1 cut(s) | 601 |
| RsaNI | GTAC | 1 cut(s) | 600 |
| SacI | GAGCTC | 3 cut(s) | 39, 239, 642 |
| SaqAI | TTAA | 4 cut(s) | 66, 162, 410, 650 |
| SatI | GCNGC | 3 cut(s) | 335, 549, 864 |
| Sau3AI | GATC | 1 cut(s) | 877 |
| Sau96I | GGNCC | 3 cut(s) | 140, 725, 948 |
| SchI | GAGTC | 2 cut(s) | 295, 512 |
| ScrFI | CCNGG | 5 cut(s) | 121, 232, 708, 729, 868 |
| SduI | GDGCHC | 5 cut(s) | 39, 239, 274, 436, 642 |
| SexAI | ACCWGGT | 1 cut(s) | 727 |
| SfaNI | GCATC | 5 cut(s) | 37, 210, 479, 546, 850 |
| SfcI | CTRYAG | 1 cut(s) | 667 |
| SinI | GGWCC | 2 cut(s) | 140, 725 |
| SmlI | CTYRAG | 2 cut(s) | 522, 566 |
| SmoI | CTYRAG | 2 cut(s) | 522, 566 |
| Sse9I | AATT | 5 cut(s) | 25, 182, 450, 678, 899 |
| SsiI | CCGC | 2 cut(s) | 863, 890 |
| SspMI | CTAG | 1 cut(s) | 659 |
| SstI | GAGCTC | 3 cut(s) | 39, 239, 642 |
| StyD4I | CCNGG | 5 cut(s) | 119, 230, 706, 727, 866 |
| StyI | CCWWGG | 2 cut(s) | 104, 402 |
| TaaI | ACNGT | 5 cut(s) | 14, 97, 464, 632, 671 |
| TaiI | ACGT | 2 cut(s) | 329, 657 |
| TaqI | TCGA | 1 cut(s) | 276 |
| TaqII | GACCGA | 1 cut(s) | 222 |
| TasI | AATT | 5 cut(s) | 25, 182, 450, 678, 899 |
| TatI | WGTACW | 1 cut(s) | 599 |
| TauI | GCSGC | 1 cut(s) | 866 |
| TfiI | GAWTC | 1 cut(s) | 70 |
| Tru1I | TTAA | 4 cut(s) | 66, 162, 410, 650 |
| Tru9I | TTAA | 4 cut(s) | 66, 162, 410, 650 |
| TscAI | CASTG | 4 cut(s) | 19, 84, 467, 676 |
| TseI | GCWGC | 2 cut(s) | 334, 548 |
| TspDTI | ATGAA | 1 cut(s) | 870 |
| TspRI | CASTG | 4 cut(s) | 19, 84, 467, 676 |
| VpaK11BI | GGWCC | 2 cut(s) | 140, 725 |
| XapI | RAATTY | 2 cut(s) | 182, 899 |
| XceI | RCATGY | 1 cut(s) | 496 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 400 |
| XmiI | GTMKAC | 1 cut(s) | 204 |
| XspI | CTAG | 1 cut(s) | 659 |
| Zsp2I | ATGCAT | 1 cut(s) | 494 |