Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 166 |
| AciI | CCGC | 3 cut(s) | 164, 166, 231 |
| AclWI | GGATC | 4 cut(s) | 56, 155, 168, 249 |
| AgsI | TTSAA | 1 cut(s) | 197 |
| AluBI | AGCT | 2 cut(s) | 121, 283 |
| AluI | AGCT | 2 cut(s) | 121, 283 |
| Alw26I | GTCTC | 1 cut(s) | 227 |
| AlwI | GGATC | 4 cut(s) | 56, 155, 168, 249 |
| Ama87I | CYCGRG | 1 cut(s) | 124 |
| AvaI | CYCGRG | 1 cut(s) | 124 |
| BamHI | GGATCC | 1 cut(s) | 160 |
| BbsI | GAAGAC | 1 cut(s) | 317 |
| BccI | CCATC | 1 cut(s) | 74 |
| BcoDI | GTCTC | 1 cut(s) | 227 |
| BmeT110I | CYCGRG | 1 cut(s) | 124 |
| BmiI | GGNNCC | 1 cut(s) | 162 |
| BpiI | GAAGAC | 1 cut(s) | 317 |
| BpmI | CTGGAG | 1 cut(s) | 101 |
| BsaJI | CCNNGG | 1 cut(s) | 164 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 76, 106 |
| BseDI | CCNNGG | 1 cut(s) | 164 |
| BseGI | GGATG | 3 cut(s) | 85, 108, 331 |
| Bsh1236I | CGCG | 1 cut(s) | 166 |
| BsiHKCI | CYCGRG | 1 cut(s) | 124 |
| BslFI | GGGAC | 2 cut(s) | 33, 182 |
| BsmAI | GTCTC | 1 cut(s) | 227 |
| BsmFI | GGGAC | 2 cut(s) | 33, 182 |
| BsmI | GAATGC | 1 cut(s) | 156 |
| BsoBI | CYCGRG | 1 cut(s) | 124 |
| Bsp143I | GATC | 3 cut(s) | 61, 160, 241 |
| BspACI | CCGC | 3 cut(s) | 164, 166, 231 |
| BspFNI | CGCG | 1 cut(s) | 166 |
| BspLI | GGNNCC | 1 cut(s) | 162 |
| BspPI | GGATC | 4 cut(s) | 56, 155, 168, 249 |
| BssECI | CCNNGG | 1 cut(s) | 164 |
| BssMI | GATC | 3 cut(s) | 61, 160, 241 |
| Bst4CI | ACNGT | 2 cut(s) | 109, 270 |
| BstDEI | CTNAG | 1 cut(s) | 179 |
| BstDSI | CCRYGG | 1 cut(s) | 164 |
| BstF5I | GGATG | 3 cut(s) | 85, 108, 331 |
| BstFNI | CGCG | 1 cut(s) | 166 |
| BstKTI | GATC | 3 cut(s) | 64, 163, 244 |
| BstMAI | GTCTC | 1 cut(s) | 227 |
| BstMBI | GATC | 3 cut(s) | 61, 160, 241 |
| BstUI | CGCG | 1 cut(s) | 166 |
| BstV2I | GAAGAC | 1 cut(s) | 317 |
| BstX2I | RGATCY | 1 cut(s) | 160 |
| BstYI | RGATCY | 1 cut(s) | 160 |
| BtgI | CCRYGG | 1 cut(s) | 164 |
| BtsCI | GGATG | 3 cut(s) | 85, 108, 331 |
| BtsIMutI | CAGTG | 1 cut(s) | 114 |
| Cfr42I | CCGCGG | 1 cut(s) | 167 |
| CviAII | CATG | 2 cut(s) | 245, 286 |
| CviJI | RGCY | 2 cut(s) | 121, 283 |
| CviKI_1 | RGCY | 2 cut(s) | 121, 283 |
| DdeI | CTNAG | 1 cut(s) | 179 |
| DpnI | GATC | 3 cut(s) | 63, 162, 243 |
| DpnII | GATC | 3 cut(s) | 61, 160, 241 |
| DraI | TTTAAA | 1 cut(s) | 54 |
| Eco88I | CYCGRG | 1 cut(s) | 124 |
| FaeI | CATG | 2 cut(s) | 248, 289 |
| FaiI | YATR | 5 cut(s) | 191, 201, 246, 287, 300 |
| FaqI | GGGAC | 2 cut(s) | 33, 182 |
| FatI | CATG | 2 cut(s) | 244, 285 |
| FauI | CCCGC | 1 cut(s) | 159 |
| FokI | GGATG | 3 cut(s) | 92, 115, 338 |
| GsuI | CTGGAG | 1 cut(s) | 101 |
| Hin1II | CATG | 2 cut(s) | 248, 289 |
| HinfI | GANTC | 1 cut(s) | 127 |
| Hpy166II | GTNNAC | 1 cut(s) | 131 |
| Hpy188I | TCNGA | 1 cut(s) | 66 |
| Hpy188III | TCNNGA | 1 cut(s) | 124 |
| Hpy8I | GTNNAC | 1 cut(s) | 131 |
| Hpy99I | CGWCG | 1 cut(s) | 10 |
| HpyAV | CCTTC | 3 cut(s) | 269, 297, 316 |
| HpyCH4III | ACNGT | 2 cut(s) | 109, 270 |
| HpyCH4V | TGCA | 1 cut(s) | 154 |
| HpyF3I | CTNAG | 1 cut(s) | 179 |
| Hsp92II | CATG | 2 cut(s) | 248, 289 |
| KspI | CCGCGG | 1 cut(s) | 167 |
| Kzo9I | GATC | 3 cut(s) | 61, 160, 241 |
| LpnPI | CCDG | 2 cut(s) | 131, 248 |
| MaeIII | GTNAC | 1 cut(s) | 251 |
| MalI | GATC | 3 cut(s) | 63, 162, 243 |
| MboI | GATC | 3 cut(s) | 61, 160, 241 |
| MboII | GAAGA | 2 cut(s) | 37, 322 |
| MfeI | CAATTG | 1 cut(s) | 256 |
| MflI | RGATCY | 1 cut(s) | 160 |
| MluCI | AATT | 1 cut(s) | 256 |
| MlyI | GAGTC | 1 cut(s) | 136 |
| MmeI | TCCRAC | 1 cut(s) | 138 |
| MnlI | CCTC | 2 cut(s) | 222, 283 |
| MseI | TTAA | 1 cut(s) | 53 |
| MspA1I | CMGCKG | 1 cut(s) | 166 |
| MunI | CAATTG | 1 cut(s) | 256 |
| Mva1269I | GAATGC | 1 cut(s) | 156 |
| MvnI | CGCG | 1 cut(s) | 166 |
| NdeII | GATC | 3 cut(s) | 61, 160, 241 |
| NlaIII | CATG | 2 cut(s) | 248, 289 |
| NlaIV | GGNNCC | 1 cut(s) | 162 |
| PaeR7I | CTCGAG | 1 cut(s) | 124 |
| PctI | GAATGC | 1 cut(s) | 156 |
| PleI | GAGTC | 1 cut(s) | 135 |
| PpsI | GAGTC | 1 cut(s) | 135 |
| PspN4I | GGNNCC | 1 cut(s) | 162 |
| PsuI | RGATCY | 1 cut(s) | 160 |
| SacII | CCGCGG | 1 cut(s) | 167 |
| SaqAI | TTAA | 1 cut(s) | 53 |
| Sau3AI | GATC | 3 cut(s) | 61, 160, 241 |
| SchI | GAGTC | 1 cut(s) | 136 |
| SetI | ASST | 7 cut(s) | 123, 145, 189, 214, 280, 285, 308 |
| Sfr274I | CTCGAG | 1 cut(s) | 124 |
| Sfr303I | CCGCGG | 1 cut(s) | 167 |
| SgeI | CNNG | 9 cut(s) | 130, 136, 138, 177, 179, 257, 275, 279, 298 |
| SgrBI | CCGCGG | 1 cut(s) | 167 |
| SlaI | CTCGAG | 1 cut(s) | 124 |
| SmlI | CTYRAG | 1 cut(s) | 124 |
| SmoI | CTYRAG | 1 cut(s) | 124 |
| Sse9I | AATT | 1 cut(s) | 256 |
| SsiI | CCGC | 3 cut(s) | 164, 166, 231 |
| TaaI | ACNGT | 2 cut(s) | 109, 270 |
| TaqI | TCGA | 2 cut(s) | 125, 320 |
| TasI | AATT | 1 cut(s) | 256 |
| Tru1I | TTAA | 1 cut(s) | 53 |
| Tru9I | TTAA | 1 cut(s) | 53 |
| TscAI | CASTG | 1 cut(s) | 114 |
| TspDTI | ATGAA | 1 cut(s) | 216 |
| TspGWI | ACGGA | 3 cut(s) | 23, 37, 115 |
| TspRI | CASTG | 1 cut(s) | 114 |
| XhoI | CTCGAG | 1 cut(s) | 124 |