Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 229 |
| AciI | CCGC | 2 cut(s) | 28, 229 |
| AclWI | GGATC | 1 cut(s) | 74 |
| AlwI | GGATC | 1 cut(s) | 74 |
| AspS9I | GGNCC | 1 cut(s) | 124 |
| AsuC2I | CCSGG | 1 cut(s) | 133 |
| AsuHPI | GGTGA | 1 cut(s) | 121 |
| AvaII | GGWCC | 1 cut(s) | 124 |
| BccI | CCATC | 1 cut(s) | 248 |
| BceAI | ACGGC | 1 cut(s) | 15 |
| BcnI | CCSGG | 1 cut(s) | 133 |
| BfaI | CTAG | 2 cut(s) | 59, 113 |
| BglII | AGATCT | 1 cut(s) | 177 |
| Bme1390I | CCNGG | 1 cut(s) | 133 |
| Bme18I | GGWCC | 1 cut(s) | 124 |
| BmgT120I | GGNCC | 1 cut(s) | 124 |
| BmrFI | CCNGG | 1 cut(s) | 133 |
| BpuMI | CCSGG | 1 cut(s) | 133 |
| BsaBI | GATNNNNATC | 2 cut(s) | 54, 258 |
| Bse8I | GATNNNNATC | 2 cut(s) | 54, 258 |
| BseGI | GGATG | 1 cut(s) | 259 |
| BseJI | GATNNNNATC | 2 cut(s) | 54, 258 |
| BseRI | GAGGAG | 1 cut(s) | 209 |
| BsiSI | CCGG | 1 cut(s) | 132 |
| Bsp143I | GATC | 4 cut(s) | 55, 79, 177, 259 |
| BspACI | CCGC | 2 cut(s) | 28, 229 |
| BspPI | GGATC | 1 cut(s) | 74 |
| BsrBI | CCGCTC | 1 cut(s) | 229 |
| BssMI | GATC | 4 cut(s) | 55, 79, 177, 259 |
| BstF5I | GGATG | 1 cut(s) | 259 |
| BstKTI | GATC | 4 cut(s) | 58, 82, 180, 262 |
| BstMBI | GATC | 4 cut(s) | 55, 79, 177, 259 |
| BstSCI | CCNGG | 1 cut(s) | 131 |
| BstX2I | RGATCY | 1 cut(s) | 177 |
| BstYI | RGATCY | 1 cut(s) | 177 |
| BtsCI | GGATG | 1 cut(s) | 259 |
| Cfr13I | GGNCC | 1 cut(s) | 124 |
| CviJI | RGCY | 1 cut(s) | 112 |
| CviKI_1 | RGCY | 1 cut(s) | 112 |
| DpnI | GATC | 4 cut(s) | 57, 81, 179, 261 |
| DpnII | GATC | 4 cut(s) | 55, 79, 177, 259 |
| DraI | TTTAAA | 1 cut(s) | 247 |
| Eco47I | GGWCC | 1 cut(s) | 124 |
| EcoO109I | RGGNCCY | 1 cut(s) | 124 |
| FauI | CCCGC | 1 cut(s) | 35 |
| FokI | GGATG | 1 cut(s) | 266 |
| FspBI | CTAG | 2 cut(s) | 59, 113 |
| HapII | CCGG | 1 cut(s) | 132 |
| HincII | GTYRAC | 1 cut(s) | 186 |
| HindII | GTYRAC | 1 cut(s) | 186 |
| HinfI | GANTC | 2 cut(s) | 105, 152 |
| HpaII | CCGG | 1 cut(s) | 132 |
| HphI | GGTGA | 1 cut(s) | 121 |
| Hpy166II | GTNNAC | 1 cut(s) | 186 |
| Hpy188I | TCNGA | 1 cut(s) | 226 |
| Hpy188III | TCNNGA | 1 cut(s) | 59 |
| Hpy8I | GTNNAC | 1 cut(s) | 186 |
| HpyAV | CCTTC | 2 cut(s) | 115, 184 |
| HpyCH4V | TGCA | 1 cut(s) | 98 |
| Kzo9I | GATC | 4 cut(s) | 55, 79, 177, 259 |
| LmnI | GCTCC | 1 cut(s) | 226 |
| LpnPI | CCDG | 4 cut(s) | 94, 145, 145, 166 |
| MaeI | CTAG | 2 cut(s) | 59, 113 |
| MalI | GATC | 4 cut(s) | 57, 81, 179, 261 |
| MbiI | CCGCTC | 1 cut(s) | 229 |
| MboI | GATC | 4 cut(s) | 55, 79, 177, 259 |
| MboII | GAAGA | 1 cut(s) | 148 |
| MflI | RGATCY | 1 cut(s) | 177 |
| MlyI | GAGTC | 1 cut(s) | 161 |
| MmeI | TCCRAC | 1 cut(s) | 107 |
| MnlI | CCTC | 3 cut(s) | 55, 137, 187 |
| MseI | TTAA | 2 cut(s) | 144, 246 |
| MspI | CCGG | 1 cut(s) | 132 |
| MspR9I | CCNGG | 1 cut(s) | 133 |
| NciI | CCSGG | 1 cut(s) | 133 |
| NdeII | GATC | 4 cut(s) | 55, 79, 177, 259 |
| PfeI | GAWTC | 1 cut(s) | 105 |
| PleI | GAGTC | 1 cut(s) | 160 |
| PpsI | GAGTC | 1 cut(s) | 160 |
| PpuMI | RGGWCCY | 1 cut(s) | 124 |
| Psp5II | RGGWCCY | 1 cut(s) | 124 |
| PspPI | GGNCC | 1 cut(s) | 124 |
| PspPPI | RGGWCCY | 1 cut(s) | 124 |
| PsuI | RGATCY | 1 cut(s) | 177 |
| SaqAI | TTAA | 2 cut(s) | 144, 246 |
| Sau3AI | GATC | 4 cut(s) | 55, 79, 177, 259 |
| Sau96I | GGNCC | 1 cut(s) | 124 |
| SchI | GAGTC | 1 cut(s) | 161 |
| ScrFI | CCNGG | 1 cut(s) | 133 |
| SetI | ASST | 2 cut(s) | 66, 126 |
| SinI | GGWCC | 1 cut(s) | 124 |
| SsiI | CCGC | 2 cut(s) | 28, 229 |
| SspMI | CTAG | 2 cut(s) | 59, 113 |
| StyD4I | CCNGG | 1 cut(s) | 131 |
| TaqI | TCGA | 2 cut(s) | 234, 262 |
| TfiI | GAWTC | 1 cut(s) | 105 |
| Tru1I | TTAA | 2 cut(s) | 144, 246 |
| Tru9I | TTAA | 2 cut(s) | 144, 246 |
| TspGWI | ACGGA | 1 cut(s) | 266 |
| VpaK11BI | GGWCC | 1 cut(s) | 124 |
| XbaI | TCTAGA | 1 cut(s) | 58 |
| XspI | CTAG | 2 cut(s) | 59, 113 |