ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 432 |
| AciI | CCGC | 1 cut(s) | 366 |
| AclWI | GGATC | 1 cut(s) | 564 |
| AcsI | RAATTY | 2 cut(s) | 107, 437 |
| AcuI | CTGAAG | 1 cut(s) | 627 |
| AfaI | GTAC | 2 cut(s) | 304, 445 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 40, 206, 553 |
| AflII | CTTAAG | 1 cut(s) | 128 |
| AgsI | TTSAA | 4 cut(s) | 23, 112, 179, 604 |
| AhlI | ACTAGT | 1 cut(s) | 305 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 671, 703 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 366, 398, 568, 600 |
| AluBI | AGCT | 5 cut(s) | 26, 420, 641, 647, 695 |
| AluI | AGCT | 5 cut(s) | 26, 420, 641, 647, 695 |
| Alw26I | GTCTC | 2 cut(s) | 138, 476 |
| AlwI | GGATC | 1 cut(s) | 564 |
| Ama87I | CYCGRG | 1 cut(s) | 135 |
| Aor13HI | TCCGGA | 1 cut(s) | 432 |
| ApoI | RAATTY | 2 cut(s) | 107, 437 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 525 |
| AspS9I | GGNCC | 1 cut(s) | 734 |
| AsuHPI | GGTGA | 2 cut(s) | 82, 221 |
| AvaI | CYCGRG | 1 cut(s) | 135 |
| AvaII | GGWCC | 1 cut(s) | 734 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 35 |
| BccI | CCATC | 4 cut(s) | 149, 185, 191, 329 |
| BcoDI | GTCTC | 2 cut(s) | 138, 476 |
| BcuI | ACTAGT | 1 cut(s) | 305 |
| BfaI | CTAG | 1 cut(s) | 306 |
| BfrI | CTTAAG | 1 cut(s) | 128 |
| BisI | GCNGC | 1 cut(s) | 366 |
| BlsI | GCNGC | 1 cut(s) | 367 |
| BmcAI | AGTACT | 1 cut(s) | 304 |
| Bme18I | GGWCC | 1 cut(s) | 734 |
| BmeT110I | CYCGRG | 1 cut(s) | 135 |
| BmgT120I | GGNCC | 1 cut(s) | 734 |
| BmiI | GGNNCC | 1 cut(s) | 270 |
| BmsI | GCATC | 1 cut(s) | 658 |
| BpmI | CTGGAG | 1 cut(s) | 297 |
| BsaI | GGTCTC | 1 cut(s) | 476 |
| BsaJI | CCNNGG | 1 cut(s) | 612 |
| BsaWI | WCCGGW | 1 cut(s) | 432 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 295, 325 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 40, 206, 553 |
| Bse1I | ACTGG | 1 cut(s) | 314 |
| BseAI | TCCGGA | 1 cut(s) | 432 |
| BseDI | CCNNGG | 1 cut(s) | 612 |
| BseGI | GGATG | 2 cut(s) | 183, 594 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 40, 206, 553 |
| BseNI | ACTGG | 1 cut(s) | 314 |
| BseRI | GAGGAG | 1 cut(s) | 691 |
| BsiHKCI | CYCGRG | 1 cut(s) | 135 |
| BsiSI | CCGG | 1 cut(s) | 433 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 40, 206, 553 |
| BsmAI | GTCTC | 2 cut(s) | 138, 476 |
| BsmI | GAATGC | 1 cut(s) | 195 |
| Bso31I | GGTCTC | 1 cut(s) | 476 |
| BsoBI | CYCGRG | 1 cut(s) | 135 |
| Bsp13I | TCCGGA | 1 cut(s) | 432 |
| Bsp143I | GATC | 1 cut(s) | 556 |
| Bsp19I | CCATGG | 1 cut(s) | 612 |
| BspACI | CCGC | 1 cut(s) | 366 |
| BspEI | TCCGGA | 1 cut(s) | 432 |
| BspHI | TCATGA | 1 cut(s) | 277 |
| BspLI | GGNNCC | 1 cut(s) | 270 |
| BspPI | GGATC | 1 cut(s) | 564 |
| BspTI | CTTAAG | 1 cut(s) | 128 |
| BspTNI | GGTCTC | 1 cut(s) | 476 |
| BsrI | ACTGG | 1 cut(s) | 314 |
| BssECI | CCNNGG | 1 cut(s) | 612 |
| BssMI | GATC | 1 cut(s) | 556 |
| BssT1I | CCWWGG | 1 cut(s) | 612 |
| Bst4CI | ACNGT | 1 cut(s) | 302 |
| Bst6I | CTCTTC | 1 cut(s) | 605 |
| BstAFI | CTTAAG | 1 cut(s) | 128 |
| BstC8I | GCNNGC | 1 cut(s) | 465 |
| BstDSI | CCRYGG | 1 cut(s) | 612 |
| BstF5I | GGATG | 2 cut(s) | 183, 594 |
| BstKTI | GATC | 1 cut(s) | 559 |
| BstMAI | GTCTC | 2 cut(s) | 138, 476 |
| BstMBI | GATC | 1 cut(s) | 556 |
| BstX2I | RGATCY | 1 cut(s) | 556 |
| BstYI | RGATCY | 1 cut(s) | 556 |
| BtgI | CCRYGG | 1 cut(s) | 612 |
| BtsCI | GGATG | 2 cut(s) | 183, 594 |
| Cac8I | GCNNGC | 1 cut(s) | 465 |
| CciI | TCATGA | 1 cut(s) | 277 |
| Cfr13I | GGNCC | 1 cut(s) | 734 |
| Csp6I | GTAC | 2 cut(s) | 303, 444 |
| CviAII | CATG | 4 cut(s) | 278, 343, 424, 613 |
| CviQI | GTAC | 2 cut(s) | 303, 444 |
| DpnI | GATC | 1 cut(s) | 558 |
| DpnII | GATC | 1 cut(s) | 556 |
| Eam1104I | CTCTTC | 1 cut(s) | 605 |
| EarI | CTCTTC | 1 cut(s) | 605 |
| Eco130I | CCWWGG | 1 cut(s) | 612 |
| Eco31I | GGTCTC | 1 cut(s) | 476 |
| Eco32I | GATATC | 1 cut(s) | 544 |
| Eco47I | GGWCC | 1 cut(s) | 734 |
| Eco57I | CTGAAG | 1 cut(s) | 627 |
| Eco88I | CYCGRG | 1 cut(s) | 135 |
| EcoRI | GAATTC | 1 cut(s) | 107 |
| EcoRV | GATATC | 1 cut(s) | 544 |
| EcoT14I | CCWWGG | 1 cut(s) | 612 |
| ErhI | CCWWGG | 1 cut(s) | 612 |
| FaeI | CATG | 4 cut(s) | 281, 346, 427, 616 |
| FatI | CATG | 4 cut(s) | 277, 342, 423, 612 |
| Fnu4HI | GCNGC | 1 cut(s) | 366 |
| FokI | GGATG | 2 cut(s) | 170, 581 |
| Fsp4HI | GCNGC | 1 cut(s) | 366 |
| FspBI | CTAG | 1 cut(s) | 306 |
| GluI | GCNGC | 1 cut(s) | 366 |
| GsuI | CTGGAG | 1 cut(s) | 297 |
| HapII | CCGG | 1 cut(s) | 433 |
| Hin1II | CATG | 4 cut(s) | 281, 346, 427, 616 |
| HincII | GTYRAC | 1 cut(s) | 100 |
| HindII | GTYRAC | 1 cut(s) | 100 |
| HindIII | AAGCTT | 1 cut(s) | 639 |
| HinfI | GANTC | 6 cut(s) | 141, 203, 245, 381, 429, 526 |
| HpaII | CCGG | 1 cut(s) | 433 |
| HphI | GGTGA | 2 cut(s) | 82, 221 |
| Hpy166II | GTNNAC | 1 cut(s) | 100 |
| Hpy188I | TCNGA | 3 cut(s) | 244, 254, 334 |
| Hpy188III | TCNNGA | 7 cut(s) | 135, 200, 278, 286, 433, 506, 530 |
| Hpy8I | GTNNAC | 1 cut(s) | 100 |
| HpyCH4III | ACNGT | 1 cut(s) | 302 |
| HpyCH4V | TGCA | 2 cut(s) | 392, 467 |
| Hsp92II | CATG | 4 cut(s) | 281, 346, 427, 616 |
| Kpn2I | TCCGGA | 1 cut(s) | 432 |
| Kzo9I | GATC | 1 cut(s) | 556 |
| LmnI | GCTCC | 1 cut(s) | 274 |
| LweI | GCATC | 1 cut(s) | 658 |
| MaeI | CTAG | 1 cut(s) | 306 |
| MaeIII | GTNAC | 2 cut(s) | 316, 490 |
| MalI | GATC | 1 cut(s) | 558 |
| MboI | GATC | 1 cut(s) | 556 |
| MboII | GAAGA | 4 cut(s) | 224, 383, 592, 647 |
| MflI | RGATCY | 1 cut(s) | 556 |
| MluCI | AATT | 5 cut(s) | 53, 107, 349, 437, 729 |
| MlyI | GAGTC | 2 cut(s) | 135, 239 |
| MnlI | CCTC | 7 cut(s) | 77, 131, 161, 293, 321, 608, 712 |
| MroI | TCCGGA | 1 cut(s) | 432 |
| MroXI | GAANNNNTTC | 1 cut(s) | 525 |
| MseI | TTAA | 3 cut(s) | 56, 129, 551 |
| MslI | CAYNNNNRTG | 1 cut(s) | 611 |
| MspA1I | CMGCKG | 1 cut(s) | 647 |
| MspCI | CTTAAG | 1 cut(s) | 128 |
| MspI | CCGG | 1 cut(s) | 433 |
| Mva1269I | GAATGC | 1 cut(s) | 195 |
| NcoI | CCATGG | 1 cut(s) | 612 |
| NdeII | GATC | 1 cut(s) | 556 |
| NlaIII | CATG | 4 cut(s) | 281, 346, 427, 616 |
| NlaIV | GGNNCC | 1 cut(s) | 270 |
| NmuCI | GTSAC | 1 cut(s) | 490 |
| PaeR7I | CTCGAG | 1 cut(s) | 135 |
| PagI | TCATGA | 1 cut(s) | 277 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 448 |
| PctI | GAATGC | 1 cut(s) | 195 |
| PdmI | GAANNNNTTC | 1 cut(s) | 525 |
| PfeI | GAWTC | 4 cut(s) | 203, 381, 429, 526 |
| PflFI | GACNNNGTC | 1 cut(s) | 248 |
| PkrI | GCNGC | 1 cut(s) | 367 |
| PleI | GAGTC | 2 cut(s) | 135, 239 |
| PpsI | GAGTC | 2 cut(s) | 135, 239 |
| PspN4I | GGNNCC | 1 cut(s) | 270 |
| PspPI | GGNCC | 1 cut(s) | 734 |
| PsuI | RGATCY | 1 cut(s) | 556 |
| PsyI | GACNNNGTC | 1 cut(s) | 248 |
| PvuII | CAGCTG | 1 cut(s) | 647 |
| RsaI | GTAC | 2 cut(s) | 304, 445 |
| RsaNI | GTAC | 2 cut(s) | 303, 444 |
| RseI | CAYNNNNRTG | 1 cut(s) | 611 |
| SaqAI | TTAA | 3 cut(s) | 56, 129, 551 |
| SatI | GCNGC | 1 cut(s) | 366 |
| Sau3AI | GATC | 1 cut(s) | 556 |
| Sau96I | GGNCC | 1 cut(s) | 734 |
| ScaI | AGTACT | 1 cut(s) | 304 |
| SchI | GAGTC | 2 cut(s) | 135, 239 |
| SfaNI | GCATC | 1 cut(s) | 658 |
| Sfr274I | CTCGAG | 1 cut(s) | 135 |
| SinI | GGWCC | 1 cut(s) | 734 |
| SlaI | CTCGAG | 1 cut(s) | 135 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 611 |
| SmlI | CTYRAG | 2 cut(s) | 128, 135 |
| SmoI | CTYRAG | 2 cut(s) | 128, 135 |
| SpeI | ACTAGT | 1 cut(s) | 305 |
| Sse9I | AATT | 5 cut(s) | 53, 107, 349, 437, 729 |
| SsiI | CCGC | 1 cut(s) | 366 |
| SspMI | CTAG | 1 cut(s) | 306 |
| StyI | CCWWGG | 1 cut(s) | 612 |
| TaaI | ACNGT | 1 cut(s) | 302 |
| TaqI | TCGA | 4 cut(s) | 136, 153, 574, 624 |
| TasI | AATT | 5 cut(s) | 53, 107, 349, 437, 729 |
| TatI | WGTACW | 1 cut(s) | 302 |
| TauI | GCSGC | 1 cut(s) | 368 |
| TfiI | GAWTC | 4 cut(s) | 203, 381, 429, 526 |
| Tru1I | TTAA | 3 cut(s) | 56, 129, 551 |
| Tru9I | TTAA | 3 cut(s) | 56, 129, 551 |
| TseFI | GTSAC | 1 cut(s) | 490 |
| Tsp45I | GTSAC | 1 cut(s) | 490 |
| TspDTI | ATGAA | 3 cut(s) | 266, 331, 412 |
| TspGWI | ACGGA | 2 cut(s) | 238, 536 |
| Tth111I | GACNNNGTC | 1 cut(s) | 248 |
| Vha464I | CTTAAG | 1 cut(s) | 128 |
| VpaK11BI | GGWCC | 1 cut(s) | 734 |
| XapI | RAATTY | 2 cut(s) | 107, 437 |
| XhoI | CTCGAG | 1 cut(s) | 135 |
| XmnI | GAANNNNTTC | 1 cut(s) | 525 |
| XspI | CTAG | 1 cut(s) | 306 |
| ZrmI | AGTACT | 1 cut(s) | 304 |