Domain of unknown function (DUF4283)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-CCHC_4 | PF14392 | 98 - 125 | 3.9e-06 | Zinc knuckle |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 428 |
| AciI | CCGC | 3 cut(s) | 68, 342, 485 |
| AclWI | GGATC | 1 cut(s) | 395 |
| AcoI | YGGCCR | 2 cut(s) | 486, 642 |
| AcsI | RAATTY | 2 cut(s) | 210, 326 |
| AfaI | GTAC | 3 cut(s) | 79, 124, 171 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 284, 475 |
| AgsI | TTSAA | 3 cut(s) | 95, 308, 623 |
| AleI | CACNNNNGTG | 1 cut(s) | 267 |
| AluBI | AGCT | 1 cut(s) | 98 |
| AluI | AGCT | 1 cut(s) | 98 |
| Alw26I | GTCTC | 2 cut(s) | 406, 576 |
| AlwI | GGATC | 1 cut(s) | 395 |
| AoxI | GGCC | 2 cut(s) | 486, 642 |
| ApoI | RAATTY | 2 cut(s) | 210, 326 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 610, 642 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 318, 529 |
| AspLEI | GCGC | 1 cut(s) | 262 |
| AspS9I | GGNCC | 3 cut(s) | 51, 466, 626 |
| AsuC2I | CCSGG | 1 cut(s) | 110 |
| AsuHPI | GGTGA | 2 cut(s) | 299, 642 |
| AvaII | GGWCC | 3 cut(s) | 51, 466, 626 |
| BaeGI | GKGCMC | 1 cut(s) | 164 |
| BccI | CCATC | 1 cut(s) | 584 |
| BceAI | ACGGC | 2 cut(s) | 273, 629 |
| BciVI | GTATCC | 1 cut(s) | 631 |
| BcnI | CCSGG | 1 cut(s) | 110 |
| BcoDI | GTCTC | 2 cut(s) | 406, 576 |
| BfaI | CTAG | 2 cut(s) | 21, 75 |
| BfuI | GTATCC | 1 cut(s) | 631 |
| BisI | GCNGC | 1 cut(s) | 486 |
| BlsI | GCNGC | 1 cut(s) | 487 |
| Bme1390I | CCNGG | 1 cut(s) | 110 |
| Bme18I | GGWCC | 3 cut(s) | 51, 466, 626 |
| BmgT120I | GGNCC | 3 cut(s) | 51, 466, 626 |
| BmiI | GGNNCC | 2 cut(s) | 467, 468 |
| BmrFI | CCNGG | 1 cut(s) | 110 |
| BmsI | GCATC | 1 cut(s) | 34 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 217, 249 |
| BpuMI | CCSGG | 1 cut(s) | 110 |
| Bsa29I | ATCGAT | 1 cut(s) | 379 |
| BsaI | GGTCTC | 2 cut(s) | 406, 576 |
| BsaJI | CCNNGG | 5 cut(s) | 244, 265, 489, 520, 564 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 284, 475 |
| BseCI | ATCGAT | 1 cut(s) | 379 |
| BseDI | CCNNGG | 5 cut(s) | 244, 265, 489, 520, 564 |
| BseGI | GGATG | 3 cut(s) | 67, 226, 355 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 284, 475 |
| BseSI | GKGCMC | 1 cut(s) | 164 |
| BseX3I | CGGCCG | 1 cut(s) | 486 |
| Bsh1285I | CGRYCG | 1 cut(s) | 489 |
| BshFI | GGCC | 2 cut(s) | 488, 644 |
| BshVI | ATCGAT | 1 cut(s) | 379 |
| BsiEI | CGRYCG | 1 cut(s) | 489 |
| BsiSI | CCGG | 2 cut(s) | 110, 401 |
| BslFI | GGGAC | 4 cut(s) | 18, 92, 479, 570 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 284, 475 |
| BsmAI | GTCTC | 2 cut(s) | 406, 576 |
| BsmFI | GGGAC | 4 cut(s) | 18, 92, 479, 570 |
| BsmI | GAATGC | 1 cut(s) | 344 |
| BsnI | GGCC | 2 cut(s) | 488, 644 |
| Bso31I | GGTCTC | 2 cut(s) | 406, 576 |
| Bsp1286I | GDGCHC | 1 cut(s) | 164 |
| Bsp143I | GATC | 2 cut(s) | 376, 387 |
| BspACI | CCGC | 3 cut(s) | 68, 342, 485 |
| BspANI | GGCC | 2 cut(s) | 488, 644 |
| BspDI | ATCGAT | 1 cut(s) | 379 |
| BspHI | TCATGA | 1 cut(s) | 322 |
| BspLI | GGNNCC | 2 cut(s) | 467, 468 |
| BspPI | GGATC | 1 cut(s) | 395 |
| BspTNI | GGTCTC | 2 cut(s) | 406, 576 |
| BssECI | CCNNGG | 5 cut(s) | 244, 265, 489, 520, 564 |
| BssMI | GATC | 2 cut(s) | 376, 387 |
| BssT1I | CCWWGG | 3 cut(s) | 244, 520, 564 |
| Bst4CI | ACNGT | 5 cut(s) | 55, 82, 266, 587, 654 |
| BstDSI | CCRYGG | 1 cut(s) | 265 |
| BstEII | GGTNACC | 1 cut(s) | 287 |
| BstF5I | GGATG | 3 cut(s) | 67, 226, 355 |
| BstHHI | GCGC | 1 cut(s) | 262 |
| BstKTI | GATC | 2 cut(s) | 379, 390 |
| BstMAI | GTCTC | 2 cut(s) | 406, 576 |
| BstMBI | GATC | 2 cut(s) | 376, 387 |
| BstMCI | CGRYCG | 1 cut(s) | 489 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 26 |
| BstPI | GGTNACC | 1 cut(s) | 287 |
| BstSCI | CCNGG | 1 cut(s) | 108 |
| BstSLI | GKGCMC | 1 cut(s) | 164 |
| BstZI | CGGCCG | 1 cut(s) | 486 |
| Bsu15I | ATCGAT | 1 cut(s) | 379 |
| BsuI | GTATCC | 1 cut(s) | 631 |
| BsuRI | GGCC | 2 cut(s) | 488, 644 |
| BsuTUI | ATCGAT | 1 cut(s) | 379 |
| BtgI | CCRYGG | 1 cut(s) | 265 |
| BtsCI | GGATG | 3 cut(s) | 67, 226, 355 |
| CciI | TCATGA | 1 cut(s) | 322 |
| CfoI | GCGC | 1 cut(s) | 262 |
| Cfr13I | GGNCC | 3 cut(s) | 51, 466, 626 |
| ClaI | ATCGAT | 1 cut(s) | 379 |
| CseI | GACGC | 1 cut(s) | 567 |
| Csp6I | GTAC | 3 cut(s) | 78, 123, 170 |
| CviAII | CATG | 3 cut(s) | 101, 323, 451 |
| CviJI | RGCY | 7 cut(s) | 98, 233, 249, 400, 488, 543, 644 |
| CviKI_1 | RGCY | 7 cut(s) | 98, 233, 249, 400, 488, 543, 644 |
| CviQI | GTAC | 3 cut(s) | 78, 123, 170 |
| DpnI | GATC | 2 cut(s) | 378, 389 |
| DpnII | GATC | 2 cut(s) | 376, 387 |
| EaeI | YGGCCR | 2 cut(s) | 486, 642 |
| EagI | CGGCCG | 1 cut(s) | 486 |
| EclXI | CGGCCG | 1 cut(s) | 486 |
| Eco130I | CCWWGG | 3 cut(s) | 244, 520, 564 |
| Eco31I | GGTCTC | 2 cut(s) | 406, 576 |
| Eco47I | GGWCC | 3 cut(s) | 51, 466, 626 |
| Eco52I | CGGCCG | 1 cut(s) | 486 |
| Eco91I | GGTNACC | 1 cut(s) | 287 |
| EcoO109I | RGGNCCY | 1 cut(s) | 466 |
| EcoO65I | GGTNACC | 1 cut(s) | 287 |
| EcoRI | GAATTC | 1 cut(s) | 326 |
| EcoT14I | CCWWGG | 3 cut(s) | 244, 520, 564 |
| ErhI | CCWWGG | 3 cut(s) | 244, 520, 564 |
| FaeI | CATG | 3 cut(s) | 104, 326, 454 |
| FaiI | YATR | 7 cut(s) | 38, 102, 128, 312, 324, 452, 510 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 187, 219 |
| FaqI | GGGAC | 4 cut(s) | 18, 92, 479, 570 |
| FatI | CATG | 3 cut(s) | 100, 322, 450 |
| FblI | GTMKAC | 1 cut(s) | 428 |
| Fnu4HI | GCNGC | 1 cut(s) | 486 |
| FokI | GGATG | 3 cut(s) | 74, 233, 342 |
| Fsp4HI | GCNGC | 1 cut(s) | 486 |
| FspBI | CTAG | 2 cut(s) | 21, 75 |
| GlaI | GCGC | 1 cut(s) | 261 |
| GluI | GCNGC | 1 cut(s) | 486 |
| HaeIII | GGCC | 2 cut(s) | 488, 644 |
| HapII | CCGG | 2 cut(s) | 110, 401 |
| HgaI | GACGC | 1 cut(s) | 567 |
| HhaI | GCGC | 1 cut(s) | 262 |
| Hin1II | CATG | 3 cut(s) | 104, 326, 454 |
| Hin6I | GCGC | 1 cut(s) | 260 |
| HinP1I | GCGC | 1 cut(s) | 260 |
| HincII | GTYRAC | 1 cut(s) | 602 |
| HindII | GTYRAC | 1 cut(s) | 602 |
| HinfI | GANTC | 3 cut(s) | 425, 499, 530 |
| HpaII | CCGG | 2 cut(s) | 110, 401 |
| HphI | GGTGA | 2 cut(s) | 299, 642 |
| Hpy166II | GTNNAC | 4 cut(s) | 170, 429, 602, 611 |
| Hpy188I | TCNGA | 2 cut(s) | 181, 360 |
| Hpy188III | TCNNGA | 8 cut(s) | 195, 278, 323, 391, 422, 464, 503, 635 |
| Hpy8I | GTNNAC | 4 cut(s) | 170, 429, 602, 611 |
| Hpy99I | CGWCG | 2 cut(s) | 335, 364 |
| HpyAV | CCTTC | 1 cut(s) | 617 |
| HpyCH4III | ACNGT | 5 cut(s) | 55, 82, 266, 587, 654 |
| HpyCH4V | TGCA | 3 cut(s) | 137, 152, 450 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 26 |
| Hsp92II | CATG | 3 cut(s) | 104, 326, 454 |
| HspAI | GCGC | 1 cut(s) | 260 |
| KflI | GGGWCCC | 1 cut(s) | 466 |
| Kzo9I | GATC | 2 cut(s) | 376, 387 |
| LmnI | GCTCC | 1 cut(s) | 566 |
| LpnPI | CCDG | 3 cut(s) | 15, 123, 414 |
| LweI | GCATC | 1 cut(s) | 34 |
| MaeI | CTAG | 2 cut(s) | 21, 75 |
| MaeIII | GTNAC | 1 cut(s) | 287 |
| MalI | GATC | 2 cut(s) | 378, 389 |
| MboI | GATC | 2 cut(s) | 376, 387 |
| MhlI | GDGCHC | 1 cut(s) | 164 |
| MluCI | AATT | 6 cut(s) | 33, 210, 293, 326, 618, 630 |
| MlyI | GAGTC | 2 cut(s) | 434, 508 |
| MmeI | TCCRAC | 1 cut(s) | 383 |
| MroXI | GAANNNNTTC | 2 cut(s) | 318, 529 |
| MseI | TTAA | 1 cut(s) | 252 |
| MslI | CAYNNNNRTG | 1 cut(s) | 267 |
| MspI | CCGG | 2 cut(s) | 110, 401 |
| MspR9I | CCNGG | 1 cut(s) | 110 |
| Mva1269I | GAATGC | 1 cut(s) | 344 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 26 |
| NciI | CCSGG | 1 cut(s) | 110 |
| NdeII | GATC | 2 cut(s) | 376, 387 |
| NlaIII | CATG | 3 cut(s) | 104, 326, 454 |
| NlaIV | GGNNCC | 2 cut(s) | 467, 468 |
| NmeAIII | GCCGAG | 1 cut(s) | 514 |
| NmuCI | GTSAC | 1 cut(s) | 287 |
| OliI | CACNNNNGTG | 1 cut(s) | 267 |
| PagI | TCATGA | 1 cut(s) | 322 |
| PctI | GAATGC | 1 cut(s) | 344 |
| PdmI | GAANNNNTTC | 2 cut(s) | 318, 529 |
| PfeI | GAWTC | 1 cut(s) | 530 |
| PkrI | GCNGC | 1 cut(s) | 487 |
| PleI | GAGTC | 2 cut(s) | 433, 507 |
| PpsI | GAGTC | 2 cut(s) | 433, 507 |
| PpuMI | RGGWCCY | 1 cut(s) | 466 |
| Psp5II | RGGWCCY | 1 cut(s) | 466 |
| PspEI | GGTNACC | 1 cut(s) | 287 |
| PspN4I | GGNNCC | 2 cut(s) | 467, 468 |
| PspPI | GGNCC | 3 cut(s) | 51, 466, 626 |
| PspPPI | RGGWCCY | 1 cut(s) | 466 |
| RsaI | GTAC | 3 cut(s) | 79, 124, 171 |
| RsaNI | GTAC | 3 cut(s) | 78, 123, 170 |
| RseI | CAYNNNNRTG | 1 cut(s) | 267 |
| SaqAI | TTAA | 1 cut(s) | 252 |
| SatI | GCNGC | 1 cut(s) | 486 |
| Sau3AI | GATC | 2 cut(s) | 376, 387 |
| Sau96I | GGNCC | 3 cut(s) | 51, 466, 626 |
| SchI | GAGTC | 2 cut(s) | 434, 508 |
| ScrFI | CCNGG | 1 cut(s) | 110 |
| SduI | GDGCHC | 1 cut(s) | 164 |
| SetI | ASST | 6 cut(s) | 28, 100, 418, 463, 522, 628 |
| SfaNI | GCATC | 1 cut(s) | 34 |
| SinI | GGWCC | 3 cut(s) | 51, 466, 626 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 267 |
| Sse9I | AATT | 6 cut(s) | 33, 210, 293, 326, 618, 630 |
| SsiI | CCGC | 3 cut(s) | 68, 342, 485 |
| SspMI | CTAG | 2 cut(s) | 21, 75 |
| StyD4I | CCNGG | 1 cut(s) | 108 |
| StyI | CCWWGG | 3 cut(s) | 244, 520, 564 |
| TaaI | ACNGT | 5 cut(s) | 55, 82, 266, 587, 654 |
| TaqI | TCGA | 2 cut(s) | 235, 379 |
| TasI | AATT | 6 cut(s) | 33, 210, 293, 326, 618, 630 |
| TauI | GCSGC | 1 cut(s) | 488 |
| TfiI | GAWTC | 1 cut(s) | 530 |
| Tru1I | TTAA | 1 cut(s) | 252 |
| Tru9I | TTAA | 1 cut(s) | 252 |
| TseFI | GTSAC | 1 cut(s) | 287 |
| Tsp45I | GTSAC | 1 cut(s) | 287 |
| TspDTI | ATGAA | 3 cut(s) | 311, 327, 339 |
| TspGWI | ACGGA | 1 cut(s) | 187 |
| VpaK11BI | GGWCC | 3 cut(s) | 51, 466, 626 |
| XapI | RAATTY | 2 cut(s) | 210, 326 |
| XmiI | GTMKAC | 1 cut(s) | 428 |
| XmnI | GAANNNNTTC | 2 cut(s) | 318, 529 |
| XspI | CTAG | 2 cut(s) | 21, 75 |