Domain of unknown function (DUF4283)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-CCHC_4 | PF14392 | 190 - 227 | 3.6e-07 | Zinc knuckle |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1237 |
| Acc36I | ACCTGC | 1 cut(s) | 1237 |
| Acc65I | GGTACC | 2 cut(s) | 442, 1006 |
| AccB1I | GGYRCC | 2 cut(s) | 442, 1006 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 982 |
| AccI | GTMKAC | 2 cut(s) | 685, 1019 |
| AccIII | TCCGGA | 1 cut(s) | 463 |
| AciI | CCGC | 2 cut(s) | 389, 1187 |
| AclWI | GGATC | 1 cut(s) | 1362 |
| AcoI | YGGCCR | 1 cut(s) | 138 |
| AcsI | RAATTY | 3 cut(s) | 72, 662, 1331 |
| AcuI | CTGAAG | 2 cut(s) | 1407, 1419 |
| AcyI | GRCGYC | 1 cut(s) | 845 |
| AfaI | GTAC | 4 cut(s) | 84, 444, 913, 1008 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 620, 982, 1046, 1263, 1402 |
| AgsI | TTSAA | 6 cut(s) | 127, 431, 698, 732, 1184, 1298 |
| AjnI | CCWGG | 2 cut(s) | 613, 975 |
| AluBI | AGCT | 8 cut(s) | 26, 273, 374, 793, 935, 1027, 1131, 1149 |
| AluI | AGCT | 8 cut(s) | 26, 273, 374, 793, 935, 1027, 1131, 1149 |
| Alw26I | GTCTC | 1 cut(s) | 980 |
| AlwI | GGATC | 1 cut(s) | 1362 |
| Aor13HI | TCCGGA | 1 cut(s) | 463 |
| AoxI | GGCC | 5 cut(s) | 20, 35, 138, 1254, 1422 |
| ApeKI | GCWGC | 3 cut(s) | 26, 655, 1412 |
| ApoI | RAATTY | 3 cut(s) | 72, 662, 1331 |
| AseI | ATTAAT | 1 cut(s) | 1059 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 122 |
| Asp718I | GGTACC | 2 cut(s) | 442, 1006 |
| AspS9I | GGNCC | 5 cut(s) | 20, 623, 827, 1255, 1423 |
| AsuHPI | GGTGA | 7 cut(s) | 113, 331, 542, 791, 931, 1298, 1387 |
| AvaII | GGWCC | 2 cut(s) | 623, 827 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 903, 936 |
| BanI | GGYRCC | 2 cut(s) | 442, 1006 |
| BauI | CACGAG | 1 cut(s) | 1430 |
| BbvCI | CCTCAGC | 2 cut(s) | 474, 794 |
| BbvI | GCAGC | 3 cut(s) | 13, 642, 1424 |
| BccI | CCATC | 6 cut(s) | 199, 332, 481, 562, 695, 776 |
| BceAI | ACGGC | 5 cut(s) | 125, 153, 177, 858, 1024 |
| BciT130I | CCWGG | 2 cut(s) | 615, 977 |
| BclI | TGATCA | 1 cut(s) | 321 |
| BcoDI | GTCTC | 1 cut(s) | 980 |
| BfaI | CTAG | 3 cut(s) | 231, 963, 1128 |
| BfuAI | ACCTGC | 1 cut(s) | 1237 |
| BisI | GCNGC | 3 cut(s) | 27, 656, 1413 |
| BlsI | GCNGC | 3 cut(s) | 28, 657, 1414 |
| Bme1390I | CCNGG | 2 cut(s) | 615, 977 |
| Bme18I | GGWCC | 2 cut(s) | 623, 827 |
| BmgT120I | GGNCC | 5 cut(s) | 20, 623, 827, 1255, 1423 |
| BmiI | GGNNCC | 2 cut(s) | 444, 1008 |
| BmrFI | CCNGG | 2 cut(s) | 615, 977 |
| BmsI | GCATC | 4 cut(s) | 46, 1089, 1169, 1368 |
| Bpu10I | CCTNAGC | 2 cut(s) | 474, 794 |
| BsaHI | GRCGYC | 1 cut(s) | 845 |
| BsaJI | CCNNGG | 3 cut(s) | 613, 940, 1258 |
| BsaWI | WCCGGW | 2 cut(s) | 463, 642 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 620, 982, 1046, 1263, 1402 |
| Bse1I | ACTGG | 2 cut(s) | 38, 189 |
| BseAI | TCCGGA | 1 cut(s) | 463 |
| BseBI | CCWGG | 2 cut(s) | 615, 977 |
| BseDI | CCNNGG | 3 cut(s) | 613, 940, 1258 |
| BseGI | GGATG | 8 cut(s) | 10, 210, 214, 343, 385, 492, 573, 1216 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 620, 982, 1046, 1263, 1402 |
| BseMII | CTCAG | 5 cut(s) | 465, 785, 1014, 1146, 1305 |
| BseNI | ACTGG | 2 cut(s) | 38, 189 |
| BseX3I | CGGCCG | 1 cut(s) | 138 |
| BseXI | GCAGC | 3 cut(s) | 13, 642, 1424 |
| BsgI | GTGCAG | 1 cut(s) | 12 |
| Bsh1285I | CGRYCG | 1 cut(s) | 141 |
| BshFI | GGCC | 5 cut(s) | 22, 37, 140, 1256, 1424 |
| BshNI | GGYRCC | 2 cut(s) | 442, 1006 |
| BsiEI | CGRYCG | 1 cut(s) | 141 |
| BsiSI | CCGG | 2 cut(s) | 464, 643 |
| BslFI | GGGAC | 1 cut(s) | 64 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 620, 982, 1046, 1263, 1402 |
| BsmAI | GTCTC | 1 cut(s) | 980 |
| BsmFI | GGGAC | 1 cut(s) | 64 |
| BsmI | GAATGC | 1 cut(s) | 391 |
| BsnI | GGCC | 5 cut(s) | 22, 37, 140, 1256, 1424 |
| Bsp13I | TCCGGA | 1 cut(s) | 463 |
| Bsp143I | GATC | 2 cut(s) | 321, 1354 |
| BspACI | CCGC | 2 cut(s) | 389, 1187 |
| BspANI | GGCC | 5 cut(s) | 22, 37, 140, 1256, 1424 |
| BspCNI | CTCAG | 5 cut(s) | 466, 786, 1015, 1145, 1306 |
| BspEI | TCCGGA | 1 cut(s) | 463 |
| BspLI | GGNNCC | 2 cut(s) | 444, 1008 |
| BspMI | ACCTGC | 1 cut(s) | 1237 |
| BspPI | GGATC | 1 cut(s) | 1362 |
| BspT107I | GGYRCC | 2 cut(s) | 442, 1006 |
| BsrI | ACTGG | 2 cut(s) | 38, 189 |
| BssECI | CCNNGG | 3 cut(s) | 613, 940, 1258 |
| BssMI | GATC | 2 cut(s) | 321, 1354 |
| BssNI | GRCGYC | 1 cut(s) | 845 |
| BssSI | CACGAG | 1 cut(s) | 1430 |
| BssT1I | CCWWGG | 1 cut(s) | 940 |
| Bst2BI | CACGAG | 1 cut(s) | 1430 |
| Bst2UI | CCWGG | 2 cut(s) | 615, 977 |
| Bst4CI | ACNGT | 3 cut(s) | 453, 916, 1017 |
| Bst6I | CTCTTC | 2 cut(s) | 748, 1220 |
| BstACI | GRCGYC | 1 cut(s) | 845 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 93 |
| BstC8I | GCNNGC | 2 cut(s) | 24, 1422 |
| BstDEI | CTNAG | 9 cut(s) | 474, 590, 689, 794, 1023, 1132, 1167, 1314, 1368 |
| BstDSI | CCRYGG | 1 cut(s) | 1258 |
| BstF5I | GGATG | 8 cut(s) | 10, 210, 214, 343, 385, 492, 573, 1216 |
| BstKTI | GATC | 2 cut(s) | 324, 1357 |
| BstMAI | GTCTC | 1 cut(s) | 980 |
| BstMBI | GATC | 2 cut(s) | 321, 1354 |
| BstMCI | CGRYCG | 1 cut(s) | 141 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 93, 1421 |
| BstNI | CCWGG | 2 cut(s) | 615, 977 |
| BstNSI | RCATGY | 1 cut(s) | 1069 |
| BstSCI | CCNGG | 2 cut(s) | 613, 975 |
| BstV1I | GCAGC | 3 cut(s) | 13, 642, 1424 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 677 |
| BstZI | CGGCCG | 1 cut(s) | 138 |
| BsuRI | GGCC | 5 cut(s) | 22, 37, 140, 1256, 1424 |
| BtgI | CCRYGG | 1 cut(s) | 1258 |
| BtsCI | GGATG | 8 cut(s) | 10, 210, 214, 343, 385, 492, 573, 1216 |
| BtsIMutI | CAGTG | 4 cut(s) | 331, 742, 907, 921 |
| BveI | ACCTGC | 1 cut(s) | 1237 |
| Cac8I | GCNNGC | 2 cut(s) | 24, 1422 |
| Cfr13I | GGNCC | 5 cut(s) | 20, 623, 827, 1255, 1423 |
| CseI | GACGC | 1 cut(s) | 834 |
| Csp6I | GTAC | 4 cut(s) | 83, 443, 912, 1007 |
| CviAII | CATG | 5 cut(s) | 47, 855, 887, 1066, 1103 |
| CviQI | GTAC | 4 cut(s) | 83, 443, 912, 1007 |
| DdeI | CTNAG | 9 cut(s) | 474, 590, 689, 794, 1023, 1132, 1167, 1314, 1368 |
| DpnI | GATC | 2 cut(s) | 323, 1356 |
| DpnII | GATC | 2 cut(s) | 321, 1354 |
| EaeI | YGGCCR | 1 cut(s) | 138 |
| EagI | CGGCCG | 1 cut(s) | 138 |
| Eam1104I | CTCTTC | 2 cut(s) | 748, 1220 |
| EarI | CTCTTC | 2 cut(s) | 748, 1220 |
| EclXI | CGGCCG | 1 cut(s) | 138 |
| Eco130I | CCWWGG | 1 cut(s) | 940 |
| Eco47I | GGWCC | 2 cut(s) | 623, 827 |
| Eco52I | CGGCCG | 1 cut(s) | 138 |
| Eco57I | CTGAAG | 2 cut(s) | 1407, 1419 |
| EcoRII | CCWGG | 2 cut(s) | 613, 975 |
| EcoT14I | CCWWGG | 1 cut(s) | 940 |
| EcoT22I | ATGCAT | 2 cut(s) | 1071, 1104 |
| ErhI | CCWWGG | 1 cut(s) | 940 |
| FaeI | CATG | 5 cut(s) | 50, 858, 890, 1069, 1106 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 816, 848 |
| FaqI | GGGAC | 1 cut(s) | 64 |
| FatI | CATG | 5 cut(s) | 46, 854, 886, 1065, 1102 |
| FauI | CCCGC | 1 cut(s) | 1180 |
| FbaI | TGATCA | 1 cut(s) | 321 |
| FblI | GTMKAC | 2 cut(s) | 685, 1019 |
| Fnu4HI | GCNGC | 3 cut(s) | 27, 656, 1413 |
| FokI | GGATG | 8 cut(s) | 17, 217, 221, 350, 392, 499, 580, 1223 |
| Fsp4HI | GCNGC | 3 cut(s) | 27, 656, 1413 |
| FspBI | CTAG | 3 cut(s) | 231, 963, 1128 |
| GluI | GCNGC | 3 cut(s) | 27, 656, 1413 |
| HaeIII | GGCC | 5 cut(s) | 22, 37, 140, 1256, 1424 |
| HapII | CCGG | 2 cut(s) | 464, 643 |
| HgaI | GACGC | 1 cut(s) | 834 |
| Hin1I | GRCGYC | 1 cut(s) | 845 |
| Hin1II | CATG | 5 cut(s) | 50, 858, 890, 1069, 1106 |
| HincII | GTYRAC | 1 cut(s) | 195 |
| HindII | GTYRAC | 1 cut(s) | 195 |
| HindIII | AAGCTT | 2 cut(s) | 271, 933 |
| HinfI | GANTC | 3 cut(s) | 728, 893, 988 |
| HpaII | CCGG | 2 cut(s) | 464, 643 |
| HphI | GGTGA | 7 cut(s) | 113, 331, 542, 791, 931, 1298, 1387 |
| Hpy166II | GTNNAC | 3 cut(s) | 195, 686, 1020 |
| Hpy188I | TCNGA | 8 cut(s) | 363, 567, 627, 807, 1135, 1198, 1315, 1387 |
| Hpy188III | TCNNGA | 3 cut(s) | 464, 1076, 1113 |
| Hpy8I | GTNNAC | 3 cut(s) | 195, 686, 1020 |
| Hpy99I | CGWCG | 3 cut(s) | 850, 853, 1045 |
| HpyAV | CCTTC | 6 cut(s) | 112, 258, 818, 1201, 1257, 1366 |
| HpyCH4III | ACNGT | 3 cut(s) | 453, 916, 1017 |
| HpyCH4IV | ACGT | 1 cut(s) | 802 |
| HpyCH4V | TGCA | 7 cut(s) | 29, 44, 886, 1069, 1102, 1121, 1160 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 93, 1421 |
| HpyF3I | CTNAG | 9 cut(s) | 474, 590, 689, 794, 1023, 1132, 1167, 1314, 1368 |
| HpySE526I | ACGT | 1 cut(s) | 802 |
| Hsp92I | GRCGYC | 1 cut(s) | 845 |
| Hsp92II | CATG | 5 cut(s) | 50, 858, 890, 1069, 1106 |
| Kpn2I | TCCGGA | 1 cut(s) | 463 |
| KpnI | GGTACC | 2 cut(s) | 446, 1010 |
| Ksp22I | TGATCA | 1 cut(s) | 321 |
| Kzo9I | GATC | 2 cut(s) | 321, 1354 |
| LmnI | GCTCC | 1 cut(s) | 1409 |
| Lsp1109I | GCAGC | 3 cut(s) | 13, 642, 1424 |
| LweI | GCATC | 4 cut(s) | 46, 1089, 1169, 1368 |
| MaeI | CTAG | 3 cut(s) | 231, 963, 1128 |
| MaeII | ACGT | 1 cut(s) | 802 |
| MaeIII | GTNAC | 3 cut(s) | 244, 391, 902 |
| MalI | GATC | 2 cut(s) | 323, 1356 |
| MboI | GATC | 2 cut(s) | 321, 1354 |
| MboII | GAAGA | 6 cut(s) | 710, 765, 1237, 1310, 1356, 1400 |
| MluCI | AATT | 7 cut(s) | 72, 662, 1029, 1122, 1176, 1293, 1331 |
| MlyI | GAGTC | 1 cut(s) | 982 |
| MmeI | TCCRAC | 3 cut(s) | 137, 1034, 1326 |
| Mph1103I | ATGCAT | 2 cut(s) | 1071, 1104 |
| MroI | TCCGGA | 1 cut(s) | 463 |
| MroXI | GAANNNNTTC | 1 cut(s) | 122 |
| MseI | TTAA | 3 cut(s) | 834, 930, 1059 |
| MspA1I | CMGCKG | 1 cut(s) | 26 |
| MspI | CCGG | 2 cut(s) | 464, 643 |
| MspR9I | CCNGG | 2 cut(s) | 615, 977 |
| Mva1269I | GAATGC | 1 cut(s) | 391 |
| MvaI | CCWGG | 2 cut(s) | 615, 977 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 93, 1421 |
| NdeII | GATC | 2 cut(s) | 321, 1354 |
| NlaIII | CATG | 5 cut(s) | 50, 858, 890, 1069, 1106 |
| NlaIV | GGNNCC | 2 cut(s) | 444, 1008 |
| NmuCI | GTSAC | 1 cut(s) | 902 |
| NsiI | ATGCAT | 2 cut(s) | 1071, 1104 |
| NspI | RCATGY | 1 cut(s) | 1069 |
| PaqCI | CACCTGC | 1 cut(s) | 1237 |
| PctI | GAATGC | 1 cut(s) | 391 |
| PdmI | GAANNNNTTC | 1 cut(s) | 122 |
| PfeI | GAWTC | 2 cut(s) | 728, 893 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 982 |
| PfoI | TCCNGGA | 1 cut(s) | 975 |
| PkrI | GCNGC | 3 cut(s) | 28, 657, 1414 |
| PleI | GAGTC | 1 cut(s) | 982 |
| PpsI | GAGTC | 1 cut(s) | 982 |
| PshBI | ATTAAT | 1 cut(s) | 1059 |
| Psp6I | CCWGG | 2 cut(s) | 613, 975 |
| PspGI | CCWGG | 2 cut(s) | 613, 975 |
| PspN4I | GGNNCC | 2 cut(s) | 444, 1008 |
| PspPI | GGNCC | 5 cut(s) | 20, 623, 827, 1255, 1423 |
| PvuII | CAGCTG | 1 cut(s) | 26 |
| RsaI | GTAC | 4 cut(s) | 84, 444, 913, 1008 |
| RsaNI | GTAC | 4 cut(s) | 83, 443, 912, 1007 |
| SaqAI | TTAA | 3 cut(s) | 834, 930, 1059 |
| SatI | GCNGC | 3 cut(s) | 27, 656, 1413 |
| Sau3AI | GATC | 2 cut(s) | 321, 1354 |
| Sau96I | GGNCC | 5 cut(s) | 20, 623, 827, 1255, 1423 |
| SchI | GAGTC | 1 cut(s) | 982 |
| ScrFI | CCNGG | 2 cut(s) | 615, 977 |
| SfaNI | GCATC | 4 cut(s) | 46, 1089, 1169, 1368 |
| SinI | GGWCC | 2 cut(s) | 623, 827 |
| Sse9I | AATT | 7 cut(s) | 72, 662, 1029, 1122, 1176, 1293, 1331 |
| SsiI | CCGC | 2 cut(s) | 389, 1187 |
| SspMI | CTAG | 3 cut(s) | 231, 963, 1128 |
| StyD4I | CCNGG | 2 cut(s) | 613, 975 |
| StyI | CCWWGG | 1 cut(s) | 940 |
| TaaI | ACNGT | 3 cut(s) | 453, 916, 1017 |
| TaiI | ACGT | 1 cut(s) | 805 |
| TaqI | TCGA | 3 cut(s) | 150, 262, 1234 |
| TasI | AATT | 7 cut(s) | 72, 662, 1029, 1122, 1176, 1293, 1331 |
| TfiI | GAWTC | 2 cut(s) | 728, 893 |
| Tru1I | TTAA | 3 cut(s) | 834, 930, 1059 |
| Tru9I | TTAA | 3 cut(s) | 834, 930, 1059 |
| TscAI | CASTG | 4 cut(s) | 331, 742, 907, 921 |
| TseFI | GTSAC | 1 cut(s) | 902 |
| TseI | GCWGC | 3 cut(s) | 26, 655, 1412 |
| Tsp45I | GTSAC | 1 cut(s) | 902 |
| TspDTI | ATGAA | 4 cut(s) | 136, 265, 663, 1290 |
| TspGWI | ACGGA | 2 cut(s) | 212, 380 |
| TspRI | CASTG | 4 cut(s) | 331, 742, 907, 921 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 982 |
| VpaK11BI | GGWCC | 2 cut(s) | 623, 827 |
| VspI | ATTAAT | 1 cut(s) | 1059 |
| XapI | RAATTY | 3 cut(s) | 72, 662, 1331 |
| XceI | RCATGY | 1 cut(s) | 1069 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 677 |
| XmiI | GTMKAC | 2 cut(s) | 685, 1019 |
| XmnI | GAANNNNTTC | 1 cut(s) | 122 |
| XspI | CTAG | 3 cut(s) | 231, 963, 1128 |
| Zsp2I | ATGCAT | 2 cut(s) | 1071, 1104 |