Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 166 |
| AccIII | TCCGGA | 1 cut(s) | 234 |
| AciI | CCGC | 1 cut(s) | 166 |
| AcsI | RAATTY | 1 cut(s) | 260 |
| AcuI | CTGAAG | 1 cut(s) | 336 |
| AdeI | CACNNNGTG | 1 cut(s) | 22 |
| AfaI | GTAC | 1 cut(s) | 60 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 349 |
| AgsI | TTSAA | 1 cut(s) | 310 |
| AluBI | AGCT | 1 cut(s) | 101 |
| AluI | AGCT | 1 cut(s) | 101 |
| Aor13HI | TCCGGA | 1 cut(s) | 234 |
| ApoI | RAATTY | 1 cut(s) | 260 |
| AspS9I | GGNCC | 1 cut(s) | 142 |
| AsuHPI | GGTGA | 2 cut(s) | 8, 346 |
| AvaII | GGWCC | 1 cut(s) | 142 |
| BauI | CACGAG | 1 cut(s) | 176 |
| BbsI | GAAGAC | 3 cut(s) | 2, 292, 327 |
| BfaI | CTAG | 2 cut(s) | 98, 330 |
| BglII | AGATCT | 1 cut(s) | 240 |
| BlpI | GCTNAGC | 1 cut(s) | 162 |
| Bme18I | GGWCC | 1 cut(s) | 142 |
| BmgT120I | GGNCC | 1 cut(s) | 142 |
| BmiI | GGNNCC | 1 cut(s) | 144 |
| BmsI | GCATC | 1 cut(s) | 237 |
| BoxI | GACNNNNGTC | 1 cut(s) | 87 |
| BpiI | GAAGAC | 3 cut(s) | 2, 292, 327 |
| BpmI | CTGGAG | 1 cut(s) | 143 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 162 |
| BsaBI | GATNNNNATC | 1 cut(s) | 117 |
| BsaJI | CCNNGG | 1 cut(s) | 252 |
| BsaWI | WCCGGW | 1 cut(s) | 234 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 42, 72 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 349 |
| Bse8I | GATNNNNATC | 1 cut(s) | 117 |
| BseAI | TCCGGA | 1 cut(s) | 234 |
| BseDI | CCNNGG | 1 cut(s) | 252 |
| BseGI | GGATG | 2 cut(s) | 115, 231 |
| BseJI | GATNNNNATC | 1 cut(s) | 117 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 349 |
| BseMII | CTCAG | 1 cut(s) | 153 |
| BseRI | GAGGAG | 1 cut(s) | 83 |
| BsgI | GTGCAG | 1 cut(s) | 44 |
| BsiSI | CCGG | 1 cut(s) | 235 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 349 |
| Bsp13I | TCCGGA | 1 cut(s) | 234 |
| Bsp143I | GATC | 3 cut(s) | 118, 240, 267 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 162 |
| BspACI | CCGC | 1 cut(s) | 166 |
| BspCNI | CTCAG | 1 cut(s) | 154 |
| BspEI | TCCGGA | 1 cut(s) | 234 |
| BspLI | GGNNCC | 1 cut(s) | 144 |
| BsrBI | CCGCTC | 1 cut(s) | 166 |
| BssECI | CCNNGG | 1 cut(s) | 252 |
| BssMI | GATC | 3 cut(s) | 118, 240, 267 |
| BssSI | CACGAG | 1 cut(s) | 176 |
| BssT1I | CCWWGG | 1 cut(s) | 252 |
| Bst2BI | CACGAG | 1 cut(s) | 176 |
| Bst4CI | ACNGT | 1 cut(s) | 136 |
| BstDEI | CTNAG | 1 cut(s) | 162 |
| BstF5I | GGATG | 2 cut(s) | 115, 231 |
| BstKTI | GATC | 3 cut(s) | 121, 243, 270 |
| BstMBI | GATC | 3 cut(s) | 118, 240, 267 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 172 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 87 |
| BstV2I | GAAGAC | 3 cut(s) | 2, 292, 327 |
| BstX2I | RGATCY | 1 cut(s) | 240 |
| BstYI | RGATCY | 1 cut(s) | 240 |
| BtsCI | GGATG | 2 cut(s) | 115, 231 |
| Cfr13I | GGNCC | 1 cut(s) | 142 |
| CseI | GACGC | 1 cut(s) | 234 |
| Csp6I | GTAC | 1 cut(s) | 59 |
| CviJI | RGCY | 3 cut(s) | 101, 161, 175 |
| CviKI_1 | RGCY | 3 cut(s) | 101, 161, 175 |
| CviQI | GTAC | 1 cut(s) | 59 |
| DdeI | CTNAG | 1 cut(s) | 162 |
| DpnI | GATC | 3 cut(s) | 120, 242, 269 |
| DpnII | GATC | 3 cut(s) | 118, 240, 267 |
| DraIII | CACNNNGTG | 1 cut(s) | 22 |
| Eco130I | CCWWGG | 1 cut(s) | 252 |
| Eco47I | GGWCC | 1 cut(s) | 142 |
| Eco57I | CTGAAG | 1 cut(s) | 336 |
| EcoO109I | RGGNCCY | 1 cut(s) | 142 |
| EcoT14I | CCWWGG | 1 cut(s) | 252 |
| ErhI | CCWWGG | 1 cut(s) | 252 |
| FaiI | YATR | 2 cut(s) | 104, 326 |
| FokI | GGATG | 2 cut(s) | 122, 218 |
| FspBI | CTAG | 2 cut(s) | 98, 330 |
| GsuI | CTGGAG | 1 cut(s) | 143 |
| HapII | CCGG | 1 cut(s) | 235 |
| HgaI | GACGC | 1 cut(s) | 234 |
| HincII | GTYRAC | 3 cut(s) | 192, 208, 249 |
| HindII | GTYRAC | 3 cut(s) | 192, 208, 249 |
| HinfI | GANTC | 1 cut(s) | 215 |
| HpaII | CCGG | 1 cut(s) | 235 |
| HphI | GGTGA | 2 cut(s) | 8, 346 |
| Hpy166II | GTNNAC | 4 cut(s) | 79, 192, 208, 249 |
| Hpy188I | TCNGA | 3 cut(s) | 224, 289, 316 |
| Hpy188III | TCNNGA | 2 cut(s) | 122, 235 |
| Hpy8I | GTNNAC | 4 cut(s) | 79, 192, 208, 249 |
| Hpy99I | CGWCG | 2 cut(s) | 96, 215 |
| HpyAV | CCTTC | 3 cut(s) | 178, 196, 316 |
| HpyCH4III | ACNGT | 1 cut(s) | 136 |
| HpyCH4IV | ACGT | 1 cut(s) | 210 |
| HpyCH4V | TGCA | 2 cut(s) | 25, 197 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 172 |
| HpyF3I | CTNAG | 1 cut(s) | 162 |
| HpySE526I | ACGT | 1 cut(s) | 210 |
| Kpn2I | TCCGGA | 1 cut(s) | 234 |
| Kzo9I | GATC | 3 cut(s) | 118, 240, 267 |
| LpnPI | CCDG | 4 cut(s) | 92, 107, 229, 248 |
| LweI | GCATC | 1 cut(s) | 237 |
| MaeI | CTAG | 2 cut(s) | 98, 330 |
| MaeII | ACGT | 1 cut(s) | 210 |
| MalI | GATC | 3 cut(s) | 120, 242, 269 |
| MbiI | CCGCTC | 1 cut(s) | 166 |
| MboI | GATC | 3 cut(s) | 118, 240, 267 |
| MboII | GAAGA | 5 cut(s) | 5, 250, 292, 329, 332 |
| MflI | RGATCY | 1 cut(s) | 240 |
| MluCI | AATT | 1 cut(s) | 260 |
| MnlI | CCTC | 8 cut(s) | 21, 40, 61, 64, 118, 133, 250, 285 |
| MroI | TCCGGA | 1 cut(s) | 234 |
| MspI | CCGG | 1 cut(s) | 235 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 172 |
| NdeII | GATC | 3 cut(s) | 118, 240, 267 |
| NlaIV | GGNNCC | 1 cut(s) | 144 |
| PfeI | GAWTC | 1 cut(s) | 215 |
| PpuMI | RGGWCCY | 1 cut(s) | 142 |
| PshAI | GACNNNNGTC | 1 cut(s) | 87 |
| Psp5II | RGGWCCY | 1 cut(s) | 142 |
| PspN4I | GGNNCC | 1 cut(s) | 144 |
| PspPI | GGNCC | 1 cut(s) | 142 |
| PspPPI | RGGWCCY | 1 cut(s) | 142 |
| PsuI | RGATCY | 1 cut(s) | 240 |
| RsaI | GTAC | 1 cut(s) | 60 |
| RsaNI | GTAC | 1 cut(s) | 59 |
| Sau3AI | GATC | 3 cut(s) | 118, 240, 267 |
| Sau96I | GGNCC | 1 cut(s) | 142 |
| SetI | ASST | 8 cut(s) | 21, 75, 103, 129, 189, 207, 213, 296 |
| SfaNI | GCATC | 1 cut(s) | 237 |
| SinI | GGWCC | 1 cut(s) | 142 |
| Sse9I | AATT | 1 cut(s) | 260 |
| SsiI | CCGC | 1 cut(s) | 166 |
| SspMI | CTAG | 2 cut(s) | 98, 330 |
| StyI | CCWWGG | 1 cut(s) | 252 |
| TaaI | ACNGT | 1 cut(s) | 136 |
| TaiI | ACGT | 1 cut(s) | 213 |
| TaqI | TCGA | 3 cut(s) | 45, 213, 266 |
| TasI | AATT | 1 cut(s) | 260 |
| TfiI | GAWTC | 1 cut(s) | 215 |
| TspGWI | ACGGA | 1 cut(s) | 332 |
| VpaK11BI | GGWCC | 1 cut(s) | 142 |
| XapI | RAATTY | 1 cut(s) | 260 |
| XspI | CTAG | 2 cut(s) | 98, 330 |