Domain of unknown function (DUF4283)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-CCHC_4 | PF14392 | 87 - 134 | 1.7e-11 | Zinc knuckle |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 484 |
| Acc36I | ACCTGC | 1 cut(s) | 1058 |
| AccI | GTMKAC | 1 cut(s) | 478 |
| AccII | CGCG | 1 cut(s) | 856 |
| AciI | CCGC | 8 cut(s) | 137, 369, 492, 555, 836, 854, 917, 997 |
| AclWI | GGATC | 4 cut(s) | 324, 387, 461, 474 |
| AcsI | RAATTY | 5 cut(s) | 100, 189, 329, 660, 846 |
| AcuI | CTGAAG | 1 cut(s) | 473 |
| AcyI | GRCGYC | 1 cut(s) | 481 |
| AfaI | GTAC | 1 cut(s) | 534 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 422, 428, 529, 715, 1060, 1061 |
| AflIII | ACRYGT | 2 cut(s) | 535, 803 |
| AgsI | TTSAA | 3 cut(s) | 364, 632, 845 |
| AhlI | ACTAGT | 2 cut(s) | 389, 1034 |
| AjnI | CCWGG | 2 cut(s) | 421, 1017 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 28 |
| AluBI | AGCT | 1 cut(s) | 46 |
| AluI | AGCT | 1 cut(s) | 46 |
| Alw26I | GTCTC | 1 cut(s) | 801 |
| AlwI | GGATC | 4 cut(s) | 324, 387, 461, 474 |
| AoxI | GGCC | 3 cut(s) | 108, 443, 692 |
| ApoI | RAATTY | 5 cut(s) | 100, 189, 329, 660, 846 |
| AseI | ATTAAT | 1 cut(s) | 170 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 345 |
| AspLEI | GCGC | 1 cut(s) | 501 |
| AspS9I | GGNCC | 3 cut(s) | 443, 598, 692 |
| AsuHPI | GGTGA | 6 cut(s) | 245, 259, 437, 569, 869, 1061 |
| AsuII | TTCGAA | 1 cut(s) | 992 |
| AvaII | GGWCC | 1 cut(s) | 598 |
| BamHI | GGATCC | 1 cut(s) | 466 |
| BbsI | GAAGAC | 4 cut(s) | 338, 776, 878, 900 |
| BccI | CCATC | 5 cut(s) | 62, 489, 554, 614, 717 |
| BceAI | ACGGC | 1 cut(s) | 915 |
| BciT130I | CCWGG | 2 cut(s) | 423, 1019 |
| BciVI | GTATCC | 2 cut(s) | 748, 961 |
| BclI | TGATCA | 1 cut(s) | 769 |
| BcoDI | GTCTC | 1 cut(s) | 801 |
| BcuI | ACTAGT | 2 cut(s) | 389, 1034 |
| BfaI | CTAG | 4 cut(s) | 350, 390, 812, 1035 |
| BfuAI | ACCTGC | 1 cut(s) | 1058 |
| BfuI | GTATCC | 2 cut(s) | 748, 961 |
| BisI | GCNGC | 3 cut(s) | 137, 370, 836 |
| BlsI | GCNGC | 3 cut(s) | 138, 371, 837 |
| Bme1390I | CCNGG | 2 cut(s) | 423, 1019 |
| Bme18I | GGWCC | 1 cut(s) | 598 |
| BmgT120I | GGNCC | 3 cut(s) | 443, 598, 692 |
| BmiI | GGNNCC | 1 cut(s) | 468 |
| BmrFI | CCNGG | 2 cut(s) | 423, 1019 |
| BmsI | GCATC | 1 cut(s) | 742 |
| BoxI | GACNNNNGTC | 1 cut(s) | 780 |
| BpiI | GAAGAC | 4 cut(s) | 338, 776, 878, 900 |
| Bpu14I | TTCGAA | 1 cut(s) | 992 |
| BpuEI | CTTGAG | 1 cut(s) | 45 |
| BsaAI | YACGTR | 2 cut(s) | 536, 653 |
| BsaBI | GATNNNNATC | 1 cut(s) | 399 |
| BsaHI | GRCGYC | 1 cut(s) | 481 |
| BsaJI | CCNNGG | 4 cut(s) | 26, 406, 446, 1056 |
| BsaWI | WCCGGW | 2 cut(s) | 529, 548 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 422, 428, 529, 715, 1060, 1061 |
| Bse1I | ACTGG | 1 cut(s) | 988 |
| Bse8I | GATNNNNATC | 1 cut(s) | 399 |
| BseBI | CCWGG | 2 cut(s) | 423, 1019 |
| BseDI | CCNNGG | 4 cut(s) | 26, 406, 446, 1056 |
| BseGI | GGATG | 2 cut(s) | 500, 519 |
| BseJI | GATNNNNATC | 1 cut(s) | 399 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 422, 428, 529, 715, 1060, 1061 |
| BseNI | ACTGG | 1 cut(s) | 988 |
| BseYI | CCCAGC | 1 cut(s) | 919 |
| Bsh1236I | CGCG | 1 cut(s) | 856 |
| BshFI | GGCC | 3 cut(s) | 110, 445, 694 |
| BsiSI | CCGG | 2 cut(s) | 530, 549 |
| BslFI | GGGAC | 1 cut(s) | 967 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 422, 428, 529, 715, 1060, 1061 |
| BsmAI | GTCTC | 1 cut(s) | 801 |
| BsmFI | GGGAC | 1 cut(s) | 967 |
| BsmI | GAATGC | 1 cut(s) | 246 |
| BsnI | GGCC | 3 cut(s) | 110, 445, 694 |
| Bsp119I | TTCGAA | 1 cut(s) | 992 |
| Bsp143I | GATC | 7 cut(s) | 154, 183, 307, 316, 379, 466, 769 |
| Bsp19I | CCATGG | 1 cut(s) | 26 |
| BspACI | CCGC | 8 cut(s) | 137, 369, 492, 555, 836, 854, 917, 997 |
| BspANI | GGCC | 3 cut(s) | 110, 445, 694 |
| BspFNI | CGCG | 1 cut(s) | 856 |
| BspLI | GGNNCC | 1 cut(s) | 468 |
| BspMI | ACCTGC | 1 cut(s) | 1058 |
| BspPI | GGATC | 4 cut(s) | 324, 387, 461, 474 |
| BspT104I | TTCGAA | 1 cut(s) | 992 |
| BsrI | ACTGG | 1 cut(s) | 988 |
| BssECI | CCNNGG | 4 cut(s) | 26, 406, 446, 1056 |
| BssMI | GATC | 7 cut(s) | 154, 183, 307, 316, 379, 466, 769 |
| BssNI | GRCGYC | 1 cut(s) | 481 |
| BssT1I | CCWWGG | 2 cut(s) | 26, 446 |
| Bst2UI | CCWGG | 2 cut(s) | 423, 1019 |
| Bst4CI | ACNGT | 4 cut(s) | 209, 438, 821, 973 |
| BstACI | GRCGYC | 1 cut(s) | 481 |
| BstBAI | YACGTR | 2 cut(s) | 536, 653 |
| BstBI | TTCGAA | 1 cut(s) | 992 |
| BstDEI | CTNAG | 2 cut(s) | 143, 881 |
| BstDSI | CCRYGG | 3 cut(s) | 26, 406, 1056 |
| BstEII | GGTNACC | 2 cut(s) | 176, 1049 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 426 |
| BstF5I | GGATG | 2 cut(s) | 500, 519 |
| BstFNI | CGCG | 1 cut(s) | 856 |
| BstHHI | GCGC | 1 cut(s) | 501 |
| BstKTI | GATC | 7 cut(s) | 157, 186, 310, 319, 382, 469, 772 |
| BstMAI | GTCTC | 1 cut(s) | 801 |
| BstMBI | GATC | 7 cut(s) | 154, 183, 307, 316, 379, 466, 769 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 498 |
| BstNI | CCWGG | 2 cut(s) | 423, 1019 |
| BstNSI | RCATGY | 1 cut(s) | 807 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 780 |
| BstPI | GGTNACC | 2 cut(s) | 176, 1049 |
| BstSCI | CCNGG | 2 cut(s) | 421, 1017 |
| BstUI | CGCG | 1 cut(s) | 856 |
| BstV2I | GAAGAC | 4 cut(s) | 338, 776, 878, 900 |
| BstX2I | RGATCY | 1 cut(s) | 466 |
| BstYI | RGATCY | 1 cut(s) | 466 |
| BsuI | GTATCC | 2 cut(s) | 748, 961 |
| BsuRI | GGCC | 3 cut(s) | 110, 445, 694 |
| BtgI | CCRYGG | 3 cut(s) | 26, 406, 1056 |
| BtsCI | GGATG | 2 cut(s) | 500, 519 |
| BveI | ACCTGC | 1 cut(s) | 1058 |
| CfoI | GCGC | 1 cut(s) | 501 |
| Cfr13I | GGNCC | 3 cut(s) | 443, 598, 692 |
| CseI | GACGC | 1 cut(s) | 845 |
| Csp6I | GTAC | 1 cut(s) | 533 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 532, 567 |
| CviAII | CATG | 5 cut(s) | 27, 373, 804, 1085, 1092 |
| CviQI | GTAC | 1 cut(s) | 533 |
| DdeI | CTNAG | 2 cut(s) | 143, 881 |
| DpnI | GATC | 7 cut(s) | 156, 185, 309, 318, 381, 468, 771 |
| DpnII | GATC | 7 cut(s) | 154, 183, 307, 316, 379, 466, 769 |
| DraI | TTTAAA | 1 cut(s) | 304 |
| EciI | GGCGGA | 1 cut(s) | 507 |
| Eco130I | CCWWGG | 2 cut(s) | 26, 446 |
| Eco47I | GGWCC | 1 cut(s) | 598 |
| Eco57I | CTGAAG | 1 cut(s) | 473 |
| Eco91I | GGTNACC | 2 cut(s) | 176, 1049 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 426 |
| EcoO65I | GGTNACC | 2 cut(s) | 176, 1049 |
| EcoRII | CCWGG | 2 cut(s) | 421, 1017 |
| EcoT14I | CCWWGG | 2 cut(s) | 26, 446 |
| ErhI | CCWWGG | 2 cut(s) | 26, 446 |
| FaeI | CATG | 5 cut(s) | 30, 376, 807, 1088, 1095 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 940, 972 |
| FaqI | GGGAC | 1 cut(s) | 967 |
| FatI | CATG | 5 cut(s) | 26, 372, 803, 1084, 1091 |
| FbaI | TGATCA | 1 cut(s) | 769 |
| FblI | GTMKAC | 1 cut(s) | 478 |
| Fnu4HI | GCNGC | 3 cut(s) | 137, 370, 836 |
| FokI | GGATG | 2 cut(s) | 506, 507 |
| Fsp4HI | GCNGC | 3 cut(s) | 137, 370, 836 |
| FspBI | CTAG | 4 cut(s) | 350, 390, 812, 1035 |
| GlaI | GCGC | 1 cut(s) | 500 |
| GluI | GCNGC | 3 cut(s) | 137, 370, 836 |
| GsaI | CCCAGC | 1 cut(s) | 923 |
| HaeIII | GGCC | 3 cut(s) | 110, 445, 694 |
| HapII | CCGG | 2 cut(s) | 530, 549 |
| HgaI | GACGC | 1 cut(s) | 845 |
| HhaI | GCGC | 1 cut(s) | 501 |
| Hin1I | GRCGYC | 1 cut(s) | 481 |
| Hin1II | CATG | 5 cut(s) | 30, 376, 807, 1088, 1095 |
| Hin6I | GCGC | 1 cut(s) | 499 |
| HinP1I | GCGC | 1 cut(s) | 499 |
| HindIII | AAGCTT | 1 cut(s) | 44 |
| HinfI | GANTC | 3 cut(s) | 118, 224, 874 |
| HpaII | CCGG | 2 cut(s) | 530, 549 |
| HphI | GGTGA | 6 cut(s) | 245, 259, 437, 569, 869, 1061 |
| Hpy166II | GTNNAC | 3 cut(s) | 205, 479, 1011 |
| Hpy188I | TCNGA | 4 cut(s) | 88, 312, 676, 861 |
| Hpy188III | TCNNGA | 7 cut(s) | 197, 350, 713, 722, 773, 812, 892 |
| Hpy8I | GTNNAC | 3 cut(s) | 205, 479, 1011 |
| Hpy99I | CGWCG | 2 cut(s) | 486, 861 |
| HpyAV | CCTTC | 4 cut(s) | 307, 422, 426, 448 |
| HpyCH4III | ACNGT | 4 cut(s) | 209, 438, 821, 973 |
| HpyCH4IV | ACGT | 5 cut(s) | 343, 481, 535, 614, 652 |
| HpyCH4V | TGCA | 1 cut(s) | 246 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 498 |
| HpyF3I | CTNAG | 2 cut(s) | 143, 881 |
| HpySE526I | ACGT | 5 cut(s) | 343, 481, 535, 614, 652 |
| Hsp92I | GRCGYC | 1 cut(s) | 481 |
| Hsp92II | CATG | 5 cut(s) | 30, 376, 807, 1088, 1095 |
| HspAI | GCGC | 1 cut(s) | 499 |
| Ksp22I | TGATCA | 1 cut(s) | 769 |
| Kzo9I | GATC | 7 cut(s) | 154, 183, 307, 316, 379, 466, 769 |
| LmnI | GCTCC | 1 cut(s) | 1064 |
| LweI | GCATC | 1 cut(s) | 742 |
| MaeI | CTAG | 4 cut(s) | 350, 390, 812, 1035 |
| MaeII | ACGT | 5 cut(s) | 343, 481, 535, 614, 652 |
| MaeIII | GTNAC | 3 cut(s) | 176, 265, 1049 |
| MalI | GATC | 7 cut(s) | 156, 185, 309, 318, 381, 468, 771 |
| MboI | GATC | 7 cut(s) | 154, 183, 307, 316, 379, 466, 769 |
| MboII | GAAGA | 8 cut(s) | 177, 297, 338, 663, 776, 883, 900, 1017 |
| MflI | RGATCY | 1 cut(s) | 466 |
| MlyI | GAGTC | 1 cut(s) | 868 |
| MmeI | TCCRAC | 1 cut(s) | 839 |
| MnlI | CCTC | 7 cut(s) | 193, 705, 709, 837, 855, 937, 958 |
| MroXI | GAANNNNTTC | 1 cut(s) | 345 |
| MseI | TTAA | 5 cut(s) | 170, 216, 293, 303, 746 |
| MspA1I | CMGCKG | 1 cut(s) | 919 |
| MspI | CCGG | 2 cut(s) | 530, 549 |
| MspR9I | CCNGG | 2 cut(s) | 423, 1019 |
| Mva1269I | GAATGC | 1 cut(s) | 246 |
| MvaI | CCWGG | 2 cut(s) | 423, 1019 |
| MvnI | CGCG | 1 cut(s) | 856 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 498 |
| NcoI | CCATGG | 1 cut(s) | 26 |
| NdeII | GATC | 7 cut(s) | 154, 183, 307, 316, 379, 466, 769 |
| NlaIII | CATG | 5 cut(s) | 30, 376, 807, 1088, 1095 |
| NlaIV | GGNNCC | 1 cut(s) | 468 |
| NmuCI | GTSAC | 2 cut(s) | 265, 1049 |
| NspI | RCATGY | 1 cut(s) | 807 |
| NspV | TTCGAA | 1 cut(s) | 992 |
| PciI | ACATGT | 1 cut(s) | 803 |
| PctI | GAATGC | 1 cut(s) | 246 |
| PdmI | GAANNNNTTC | 1 cut(s) | 345 |
| PfeI | GAWTC | 2 cut(s) | 118, 224 |
| PkrI | GCNGC | 3 cut(s) | 138, 371, 837 |
| PleI | GAGTC | 1 cut(s) | 868 |
| PpsI | GAGTC | 1 cut(s) | 868 |
| Ppu21I | YACGTR | 2 cut(s) | 536, 653 |
| PscI | ACATGT | 1 cut(s) | 803 |
| PshAI | GACNNNNGTC | 1 cut(s) | 780 |
| PshBI | ATTAAT | 1 cut(s) | 170 |
| Psp6I | CCWGG | 2 cut(s) | 421, 1017 |
| PspEI | GGTNACC | 2 cut(s) | 176, 1049 |
| PspFI | CCCAGC | 1 cut(s) | 919 |
| PspGI | CCWGG | 2 cut(s) | 421, 1017 |
| PspN4I | GGNNCC | 1 cut(s) | 468 |
| PspPI | GGNCC | 3 cut(s) | 443, 598, 692 |
| PsuI | RGATCY | 1 cut(s) | 466 |
| RsaI | GTAC | 1 cut(s) | 534 |
| RsaNI | GTAC | 1 cut(s) | 533 |
| SaqAI | TTAA | 5 cut(s) | 170, 216, 293, 303, 746 |
| SatI | GCNGC | 3 cut(s) | 137, 370, 836 |
| Sau3AI | GATC | 7 cut(s) | 154, 183, 307, 316, 379, 466, 769 |
| Sau96I | GGNCC | 3 cut(s) | 443, 598, 692 |
| SchI | GAGTC | 1 cut(s) | 868 |
| ScrFI | CCNGG | 2 cut(s) | 423, 1019 |
| SfaNI | GCATC | 1 cut(s) | 742 |
| SfuI | TTCGAA | 1 cut(s) | 992 |
| SinI | GGWCC | 1 cut(s) | 598 |
| SmlI | CTYRAG | 1 cut(s) | 60 |
| SmoI | CTYRAG | 1 cut(s) | 60 |
| SpeI | ACTAGT | 2 cut(s) | 389, 1034 |
| SsiI | CCGC | 8 cut(s) | 137, 369, 492, 555, 836, 854, 917, 997 |
| SspMI | CTAG | 4 cut(s) | 350, 390, 812, 1035 |
| StyD4I | CCNGG | 2 cut(s) | 421, 1017 |
| StyI | CCWWGG | 2 cut(s) | 26, 446 |
| TaaI | ACNGT | 4 cut(s) | 209, 438, 821, 973 |
| TaiI | ACGT | 5 cut(s) | 346, 484, 538, 617, 655 |
| TaqI | TCGA | 4 cut(s) | 186, 250, 869, 992 |
| TaqII | GACCGA | 1 cut(s) | 894 |
| TauI | GCSGC | 3 cut(s) | 139, 372, 838 |
| TfiI | GAWTC | 2 cut(s) | 118, 224 |
| Tru1I | TTAA | 5 cut(s) | 170, 216, 293, 303, 746 |
| Tru9I | TTAA | 5 cut(s) | 170, 216, 293, 303, 746 |
| TseFI | GTSAC | 2 cut(s) | 265, 1049 |
| Tsp45I | GTSAC | 2 cut(s) | 265, 1049 |
| TspDTI | ATGAA | 3 cut(s) | 17, 287, 354 |
| TspGWI | ACGGA | 1 cut(s) | 395 |
| VpaK11BI | GGWCC | 1 cut(s) | 598 |
| VspI | ATTAAT | 1 cut(s) | 170 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 426 |
| XapI | RAATTY | 5 cut(s) | 100, 189, 329, 660, 846 |
| XbaI | TCTAGA | 2 cut(s) | 349, 811 |
| XceI | RCATGY | 1 cut(s) | 807 |
| XmiI | GTMKAC | 1 cut(s) | 478 |
| XmnI | GAANNNNTTC | 1 cut(s) | 345 |
| XspI | CTAG | 4 cut(s) | 350, 390, 812, 1035 |
| ZraI | GACGTC | 1 cut(s) | 482 |