ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 264 |
| AccB1I | GGYRCC | 1 cut(s) | 445 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 94 |
| AciI | CCGC | 3 cut(s) | 113, 172, 449 |
| AcuI | CTGAAG | 1 cut(s) | 141 |
| AdeI | CACNNNGTG | 1 cut(s) | 94 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 94, 161, 328 |
| AjiI | CACGTC | 1 cut(s) | 91 |
| Alw26I | GTCTC | 3 cut(s) | 140, 230, 311 |
| ApeKI | GCWGC | 1 cut(s) | 451 |
| AspS9I | GGNCC | 1 cut(s) | 164 |
| AsuHPI | GGTGA | 2 cut(s) | 67, 115 |
| AvaII | GGWCC | 1 cut(s) | 164 |
| BanI | GGYRCC | 1 cut(s) | 445 |
| BbsI | GAAGAC | 2 cut(s) | 81, 407 |
| BbvI | GCAGC | 1 cut(s) | 438 |
| BccI | CCATC | 2 cut(s) | 236, 453 |
| BclI | TGATCA | 1 cut(s) | 502 |
| BcoDI | GTCTC | 3 cut(s) | 140, 230, 311 |
| BfaI | CTAG | 1 cut(s) | 182 |
| BfuAI | ACCTGC | 1 cut(s) | 264 |
| BisI | GCNGC | 2 cut(s) | 449, 452 |
| BlsI | GCNGC | 2 cut(s) | 450, 453 |
| Bme18I | GGWCC | 1 cut(s) | 164 |
| BmgBI | CACGTC | 1 cut(s) | 91 |
| BmgT120I | GGNCC | 1 cut(s) | 164 |
| BmiI | GGNNCC | 2 cut(s) | 165, 447 |
| BpiI | GAAGAC | 2 cut(s) | 81, 407 |
| BpmI | CTGGAG | 1 cut(s) | 293 |
| BpuEI | CTTGAG | 1 cut(s) | 419 |
| BsaI | GGTCTC | 1 cut(s) | 311 |
| BsaJI | CCNNGG | 1 cut(s) | 200 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 26, 56 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 94, 161, 328 |
| BseDI | CCNNGG | 1 cut(s) | 200 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 94, 161, 328 |
| BseRI | GAGGAG | 1 cut(s) | 290 |
| BseXI | GCAGC | 1 cut(s) | 438 |
| BshNI | GGYRCC | 1 cut(s) | 445 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 94, 161, 328 |
| BsmAI | GTCTC | 3 cut(s) | 140, 230, 311 |
| Bso31I | GGTCTC | 1 cut(s) | 311 |
| Bsp143I | GATC | 1 cut(s) | 502 |
| BspACI | CCGC | 3 cut(s) | 113, 172, 449 |
| BspLI | GGNNCC | 2 cut(s) | 165, 447 |
| BspMI | ACCTGC | 1 cut(s) | 264 |
| BspT107I | GGYRCC | 1 cut(s) | 445 |
| BspTNI | GGTCTC | 1 cut(s) | 311 |
| BssECI | CCNNGG | 1 cut(s) | 200 |
| BssMI | GATC | 1 cut(s) | 502 |
| BssT1I | CCWWGG | 1 cut(s) | 200 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 326 |
| BstKTI | GATC | 1 cut(s) | 505 |
| BstMAI | GTCTC | 3 cut(s) | 140, 230, 311 |
| BstMBI | GATC | 1 cut(s) | 502 |
| BstV1I | GCAGC | 1 cut(s) | 438 |
| BstV2I | GAAGAC | 2 cut(s) | 81, 407 |
| BtrI | CACGTC | 1 cut(s) | 91 |
| BveI | ACCTGC | 1 cut(s) | 264 |
| Cfr13I | GGNCC | 1 cut(s) | 164 |
| CviAII | CATG | 2 cut(s) | 260, 466 |
| CviJI | RGCY | 4 cut(s) | 23, 87, 119, 251 |
| CviKI_1 | RGCY | 4 cut(s) | 23, 87, 119, 251 |
| DpnI | GATC | 1 cut(s) | 504 |
| DpnII | GATC | 1 cut(s) | 502 |
| DraIII | CACNNNGTG | 1 cut(s) | 94 |
| EciI | GGCGGA | 1 cut(s) | 128 |
| Eco130I | CCWWGG | 1 cut(s) | 200 |
| Eco31I | GGTCTC | 1 cut(s) | 311 |
| Eco32I | GATATC | 1 cut(s) | 286 |
| Eco47I | GGWCC | 1 cut(s) | 164 |
| Eco57I | CTGAAG | 1 cut(s) | 141 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 326 |
| EcoO109I | RGGNCCY | 1 cut(s) | 164 |
| EcoRV | GATATC | 1 cut(s) | 286 |
| EcoT14I | CCWWGG | 1 cut(s) | 200 |
| ErhI | CCWWGG | 1 cut(s) | 200 |
| FaeI | CATG | 2 cut(s) | 263, 469 |
| FaiI | YATR | 5 cut(s) | 80, 134, 261, 282, 467 |
| FatI | CATG | 2 cut(s) | 259, 465 |
| FbaI | TGATCA | 1 cut(s) | 502 |
| Fnu4HI | GCNGC | 2 cut(s) | 449, 452 |
| Fsp4HI | GCNGC | 2 cut(s) | 449, 452 |
| FspBI | CTAG | 1 cut(s) | 182 |
| GluI | GCNGC | 2 cut(s) | 449, 452 |
| GsuI | CTGGAG | 1 cut(s) | 293 |
| Hin1II | CATG | 2 cut(s) | 263, 469 |
| HinfI | GANTC | 3 cut(s) | 292, 432, 485 |
| HphI | GGTGA | 2 cut(s) | 67, 115 |
| Hpy188I | TCNGA | 1 cut(s) | 13 |
| Hpy188III | TCNNGA | 5 cut(s) | 272, 289, 436, 472, 506 |
| Hpy99I | CGWCG | 1 cut(s) | 95 |
| HpyAV | CCTTC | 2 cut(s) | 183, 320 |
| HpyCH4IV | ACGT | 1 cut(s) | 90 |
| HpyCH4V | TGCA | 1 cut(s) | 259 |
| HpySE526I | ACGT | 1 cut(s) | 90 |
| Hsp92II | CATG | 2 cut(s) | 263, 469 |
| Ksp22I | TGATCA | 1 cut(s) | 502 |
| Kzo9I | GATC | 1 cut(s) | 502 |
| LpnPI | CCDG | 8 cut(s) | 146, 180, 206, 257, 269, 274, 457, 491 |
| Lsp1109I | GCAGC | 1 cut(s) | 438 |
| MaeI | CTAG | 1 cut(s) | 182 |
| MaeII | ACGT | 1 cut(s) | 90 |
| MalI | GATC | 1 cut(s) | 504 |
| MboI | GATC | 1 cut(s) | 502 |
| MboII | GAAGA | 5 cut(s) | 86, 134, 169, 355, 407 |
| MluCI | AATT | 2 cut(s) | 67, 126 |
| MlyI | GAGTC | 1 cut(s) | 426 |
| MmeI | TCCRAC | 1 cut(s) | 353 |
| MnlI | CCTC | 8 cut(s) | 12, 28, 109, 268, 279, 324, 333, 356 |
| MseI | TTAA | 1 cut(s) | 324 |
| MslI | CAYNNNNRTG | 1 cut(s) | 425 |
| MspA1I | CMGCKG | 1 cut(s) | 451 |
| NdeII | GATC | 1 cut(s) | 502 |
| NlaIII | CATG | 2 cut(s) | 263, 469 |
| NlaIV | GGNNCC | 2 cut(s) | 165, 447 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 224 |
| PfeI | GAWTC | 2 cut(s) | 292, 485 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 94 |
| PkrI | GCNGC | 2 cut(s) | 450, 453 |
| PleI | GAGTC | 1 cut(s) | 426 |
| PpsI | GAGTC | 1 cut(s) | 426 |
| PpuMI | RGGWCCY | 1 cut(s) | 164 |
| Psp5II | RGGWCCY | 1 cut(s) | 164 |
| PspN4I | GGNNCC | 2 cut(s) | 165, 447 |
| PspPI | GGNCC | 1 cut(s) | 164 |
| PspPPI | RGGWCCY | 1 cut(s) | 164 |
| RseI | CAYNNNNRTG | 1 cut(s) | 425 |
| SaqAI | TTAA | 1 cut(s) | 324 |
| SatI | GCNGC | 2 cut(s) | 449, 452 |
| Sau3AI | GATC | 1 cut(s) | 502 |
| Sau96I | GGNCC | 1 cut(s) | 164 |
| SchI | GAGTC | 1 cut(s) | 426 |
| SetI | ASST | 3 cut(s) | 93, 258, 367 |
| SinI | GGWCC | 1 cut(s) | 164 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 425 |
| SmlI | CTYRAG | 1 cut(s) | 434 |
| SmoI | CTYRAG | 1 cut(s) | 434 |
| Sse9I | AATT | 2 cut(s) | 67, 126 |
| SsiI | CCGC | 3 cut(s) | 113, 172, 449 |
| SspI | AATATT | 1 cut(s) | 512 |
| SspMI | CTAG | 1 cut(s) | 182 |
| StyI | CCWWGG | 1 cut(s) | 200 |
| TaiI | ACGT | 1 cut(s) | 93 |
| TaqI | TCGA | 1 cut(s) | 295 |
| TasI | AATT | 2 cut(s) | 67, 126 |
| TauI | GCSGC | 1 cut(s) | 451 |
| TfiI | GAWTC | 2 cut(s) | 292, 485 |
| Tru1I | TTAA | 1 cut(s) | 324 |
| Tru9I | TTAA | 1 cut(s) | 324 |
| TseI | GCWGC | 1 cut(s) | 451 |
| TspGWI | ACGGA | 1 cut(s) | 31 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 94 |
| VpaK11BI | GGWCC | 1 cut(s) | 164 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 326 |
| XspI | CTAG | 1 cut(s) | 182 |