Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 346 |
| AccI | GTMKAC | 1 cut(s) | 64 |
| AciI | CCGC | 1 cut(s) | 257 |
| AclWI | GGATC | 3 cut(s) | 205, 218, 539 |
| AcsI | RAATTY | 1 cut(s) | 389 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 161, 278 |
| AgsI | TTSAA | 2 cut(s) | 177, 363 |
| AjnI | CCWGG | 2 cut(s) | 213, 291 |
| AluBI | AGCT | 1 cut(s) | 456 |
| AluI | AGCT | 1 cut(s) | 456 |
| Alw21I | GWGCWC | 1 cut(s) | 458 |
| AlwI | GGATC | 3 cut(s) | 205, 218, 539 |
| Ama87I | CYCGRG | 1 cut(s) | 457 |
| ApoI | RAATTY | 1 cut(s) | 389 |
| AspLEI | GCGC | 1 cut(s) | 264 |
| AspS9I | GGNCC | 3 cut(s) | 123, 269, 583 |
| AvaI | CYCGRG | 1 cut(s) | 457 |
| AvaII | GGWCC | 3 cut(s) | 123, 269, 583 |
| BamHI | GGATCC | 1 cut(s) | 210 |
| BanII | GRGCYC | 2 cut(s) | 19, 458 |
| Bbv12I | GWGCWC | 1 cut(s) | 458 |
| BccI | CCATC | 4 cut(s) | 155, 372, 504, 611 |
| BciT130I | CCWGG | 2 cut(s) | 215, 293 |
| BfuAI | ACCTGC | 1 cut(s) | 346 |
| BglII | AGATCT | 1 cut(s) | 9 |
| Bme1390I | CCNGG | 2 cut(s) | 215, 293 |
| Bme18I | GGWCC | 3 cut(s) | 123, 269, 583 |
| BmeT110I | CYCGRG | 1 cut(s) | 457 |
| BmgT120I | GGNCC | 3 cut(s) | 123, 269, 583 |
| BmiI | GGNNCC | 2 cut(s) | 212, 585 |
| BmrFI | CCNGG | 2 cut(s) | 215, 293 |
| BmsI | GCATC | 2 cut(s) | 234, 418 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 377, 409 |
| BsaBI | GATNNNNATC | 1 cut(s) | 57 |
| BsaJI | CCNNGG | 2 cut(s) | 44, 119 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 161, 278 |
| Bse8I | GATNNNNATC | 1 cut(s) | 57 |
| BseBI | CCWGG | 2 cut(s) | 215, 293 |
| BseDI | CCNNGG | 2 cut(s) | 44, 119 |
| BseGI | GGATG | 3 cut(s) | 467, 535, 643 |
| BseJI | GATNNNNATC | 1 cut(s) | 57 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 161, 278 |
| BseMII | CTCAG | 2 cut(s) | 212, 225 |
| BseRI | GAGGAG | 1 cut(s) | 41 |
| BsiHKAI | GWGCWC | 1 cut(s) | 458 |
| BsiHKCI | CYCGRG | 1 cut(s) | 457 |
| BslFI | GGGAC | 1 cut(s) | 569 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 161, 278 |
| BsmFI | GGGAC | 1 cut(s) | 569 |
| BsoBI | CYCGRG | 1 cut(s) | 457 |
| Bsp1286I | GDGCHC | 2 cut(s) | 19, 458 |
| Bsp143I | GATC | 7 cut(s) | 9, 58, 91, 210, 445, 544, 635 |
| Bsp19I | CCATGG | 2 cut(s) | 44, 119 |
| BspACI | CCGC | 1 cut(s) | 257 |
| BspCNI | CTCAG | 2 cut(s) | 211, 226 |
| BspLI | GGNNCC | 2 cut(s) | 212, 585 |
| BspMI | ACCTGC | 1 cut(s) | 346 |
| BspPI | GGATC | 3 cut(s) | 205, 218, 539 |
| BssECI | CCNNGG | 2 cut(s) | 44, 119 |
| BssMI | GATC | 7 cut(s) | 9, 58, 91, 210, 445, 544, 635 |
| BssNAI | GTATAC | 1 cut(s) | 65 |
| BssT1I | CCWWGG | 2 cut(s) | 44, 119 |
| Bst1107I | GTATAC | 1 cut(s) | 65 |
| Bst2UI | CCWGG | 2 cut(s) | 215, 293 |
| BstC8I | GCNNGC | 1 cut(s) | 353 |
| BstDEI | CTNAG | 3 cut(s) | 198, 234, 525 |
| BstDSI | CCRYGG | 2 cut(s) | 44, 119 |
| BstEII | GGTNACC | 1 cut(s) | 31 |
| BstF5I | GGATG | 3 cut(s) | 467, 535, 643 |
| BstHHI | GCGC | 1 cut(s) | 264 |
| BstKTI | GATC | 7 cut(s) | 12, 61, 94, 213, 448, 547, 638 |
| BstMBI | GATC | 7 cut(s) | 9, 58, 91, 210, 445, 544, 635 |
| BstNI | CCWGG | 2 cut(s) | 215, 293 |
| BstPI | GGTNACC | 1 cut(s) | 31 |
| BstSCI | CCNGG | 2 cut(s) | 213, 291 |
| BstX2I | RGATCY | 2 cut(s) | 9, 210 |
| BstYI | RGATCY | 2 cut(s) | 9, 210 |
| BstZ17I | GTATAC | 1 cut(s) | 65 |
| BtgI | CCRYGG | 2 cut(s) | 44, 119 |
| BtsCI | GGATG | 3 cut(s) | 467, 535, 643 |
| BveI | ACCTGC | 1 cut(s) | 346 |
| Cac8I | GCNNGC | 1 cut(s) | 353 |
| CfoI | GCGC | 1 cut(s) | 264 |
| Cfr13I | GGNCC | 3 cut(s) | 123, 269, 583 |
| CviAII | CATG | 5 cut(s) | 45, 120, 134, 166, 449 |
| CviJI | RGCY | 4 cut(s) | 17, 89, 351, 456 |
| CviKI_1 | RGCY | 4 cut(s) | 17, 89, 351, 456 |
| DdeI | CTNAG | 3 cut(s) | 198, 234, 525 |
| DpnI | GATC | 7 cut(s) | 11, 60, 93, 212, 447, 546, 637 |
| DpnII | GATC | 7 cut(s) | 9, 58, 91, 210, 445, 544, 635 |
| Ecl136II | GAGCTC | 1 cut(s) | 456 |
| Eco130I | CCWWGG | 2 cut(s) | 44, 119 |
| Eco24I | GRGCYC | 2 cut(s) | 19, 458 |
| Eco47I | GGWCC | 3 cut(s) | 123, 269, 583 |
| Eco53kI | GAGCTC | 1 cut(s) | 456 |
| Eco88I | CYCGRG | 1 cut(s) | 457 |
| Eco91I | GGTNACC | 1 cut(s) | 31 |
| EcoICRI | GAGCTC | 1 cut(s) | 456 |
| EcoO65I | GGTNACC | 1 cut(s) | 31 |
| EcoRII | CCWGG | 2 cut(s) | 213, 291 |
| EcoT14I | CCWWGG | 2 cut(s) | 44, 119 |
| EcoT38I | GRGCYC | 2 cut(s) | 19, 458 |
| ErhI | CCWWGG | 2 cut(s) | 44, 119 |
| FaeI | CATG | 5 cut(s) | 48, 123, 137, 169, 452 |
| FaiI | YATR | 9 cut(s) | 46, 65, 121, 135, 167, 242, 405, 450, 474 |
| FaqI | GGGAC | 1 cut(s) | 569 |
| FatI | CATG | 5 cut(s) | 44, 119, 133, 165, 448 |
| FblI | GTMKAC | 1 cut(s) | 64 |
| FokI | GGATG | 3 cut(s) | 474, 542, 630 |
| FriOI | GRGCYC | 2 cut(s) | 19, 458 |
| GlaI | GCGC | 1 cut(s) | 263 |
| HhaI | GCGC | 1 cut(s) | 264 |
| Hin1II | CATG | 5 cut(s) | 48, 123, 137, 169, 452 |
| Hin6I | GCGC | 1 cut(s) | 262 |
| HinP1I | GCGC | 1 cut(s) | 262 |
| HinfI | GANTC | 5 cut(s) | 53, 115, 173, 194, 244 |
| Hpy166II | GTNNAC | 2 cut(s) | 65, 569 |
| Hpy188I | TCNGA | 4 cut(s) | 58, 85, 96, 578 |
| Hpy188III | TCNNGA | 2 cut(s) | 208, 459 |
| Hpy8I | GTNNAC | 2 cut(s) | 65, 569 |
| HpyAV | CCTTC | 2 cut(s) | 293, 432 |
| HpyCH4V | TGCA | 3 cut(s) | 355, 472, 562 |
| HpyF3I | CTNAG | 3 cut(s) | 198, 234, 525 |
| Hsp92II | CATG | 5 cut(s) | 48, 123, 137, 169, 452 |
| HspAI | GCGC | 1 cut(s) | 262 |
| Kzo9I | GATC | 7 cut(s) | 9, 58, 91, 210, 445, 544, 635 |
| LmnI | GCTCC | 1 cut(s) | 259 |
| LpnPI | CCDG | 8 cut(s) | 185, 193, 200, 227, 246, 278, 305, 341 |
| LweI | GCATC | 2 cut(s) | 234, 418 |
| MaeIII | GTNAC | 1 cut(s) | 31 |
| MalI | GATC | 7 cut(s) | 11, 60, 93, 212, 447, 546, 637 |
| MboI | GATC | 7 cut(s) | 9, 58, 91, 210, 445, 544, 635 |
| MboII | GAAGA | 4 cut(s) | 62, 326, 404, 519 |
| MfeI | CAATTG | 1 cut(s) | 557 |
| MflI | RGATCY | 2 cut(s) | 9, 210 |
| MhlI | GDGCHC | 2 cut(s) | 19, 458 |
| MluCI | AATT | 5 cut(s) | 183, 275, 389, 519, 557 |
| MlyI | GAGTC | 2 cut(s) | 124, 188 |
| MmeI | TCCRAC | 1 cut(s) | 363 |
| MnlI | CCTC | 9 cut(s) | 19, 22, 79, 90, 215, 296, 307, 321, 472 |
| MseI | TTAA | 1 cut(s) | 107 |
| MspR9I | CCNGG | 2 cut(s) | 215, 293 |
| MunI | CAATTG | 1 cut(s) | 557 |
| MvaI | CCWGG | 2 cut(s) | 215, 293 |
| NcoI | CCATGG | 2 cut(s) | 44, 119 |
| NdeII | GATC | 7 cut(s) | 9, 58, 91, 210, 445, 544, 635 |
| NlaIII | CATG | 5 cut(s) | 48, 123, 137, 169, 452 |
| NlaIV | GGNNCC | 2 cut(s) | 212, 585 |
| PfeI | GAWTC | 3 cut(s) | 53, 173, 244 |
| PleI | GAGTC | 2 cut(s) | 123, 188 |
| PpsI | GAGTC | 2 cut(s) | 123, 188 |
| Psp124BI | GAGCTC | 1 cut(s) | 458 |
| Psp6I | CCWGG | 2 cut(s) | 213, 291 |
| PspEI | GGTNACC | 1 cut(s) | 31 |
| PspGI | CCWGG | 2 cut(s) | 213, 291 |
| PspN4I | GGNNCC | 2 cut(s) | 212, 585 |
| PspPI | GGNCC | 3 cut(s) | 123, 269, 583 |
| PsuI | RGATCY | 2 cut(s) | 9, 210 |
| SacI | GAGCTC | 1 cut(s) | 458 |
| SaqAI | TTAA | 1 cut(s) | 107 |
| Sau3AI | GATC | 7 cut(s) | 9, 58, 91, 210, 445, 544, 635 |
| Sau96I | GGNCC | 3 cut(s) | 123, 269, 583 |
| SchI | GAGTC | 2 cut(s) | 124, 188 |
| ScrFI | CCNGG | 2 cut(s) | 215, 293 |
| SduI | GDGCHC | 2 cut(s) | 19, 458 |
| SfaNI | GCATC | 2 cut(s) | 234, 418 |
| SinI | GGWCC | 3 cut(s) | 123, 269, 583 |
| Sse9I | AATT | 5 cut(s) | 183, 275, 389, 519, 557 |
| SsiI | CCGC | 1 cut(s) | 257 |
| SstI | GAGCTC | 1 cut(s) | 458 |
| StyD4I | CCNGG | 2 cut(s) | 213, 291 |
| StyI | CCWWGG | 2 cut(s) | 44, 119 |
| TaqI | TCGA | 3 cut(s) | 220, 466, 615 |
| TasI | AATT | 5 cut(s) | 183, 275, 389, 519, 557 |
| TfiI | GAWTC | 3 cut(s) | 53, 173, 244 |
| Tru1I | TTAA | 1 cut(s) | 107 |
| Tru9I | TTAA | 1 cut(s) | 107 |
| TspDTI | ATGAA | 3 cut(s) | 17, 257, 623 |
| TspGWI | ACGGA | 1 cut(s) | 38 |
| VpaK11BI | GGWCC | 3 cut(s) | 123, 269, 583 |
| XapI | RAATTY | 1 cut(s) | 389 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 163 |
| XmiI | GTMKAC | 1 cut(s) | 64 |