Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0000322

Physical Location & Seq

Genomic Coordinates Forward (+)

20939965 .. 20942803

Gene Structure 2839 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0209500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 945 bp

ATGGCGAGGAGGAGATTGTTGGTGCTGCTAAAACCGTTCGACGTTTACCCAGCTTCCCAATCCGACGGCCTGTCTCGCATCTCCAGCCTCCAGCTACAGCACTTGGACAATAGGCGAAAGGTGCACAAGGATGCAATAAACTTTTGTCAGAATATTTTGCTGCACAAGCCTGTTGAGTGGAAAGCTCTAGTGCGTAACGATCTAAGGCTGCCCATCCGTGATGTCGACCTTGTTATTACAGTTGGTGGTGATGGCAGTTTACTACATGCTAGCCATTATATTGATGACTCTGTTCCAGTTCTAGGAGTGAATTCTGACCCTACCCGACCTGAAGAGGTGGAAAAGCACAGCAATGAGTATGATGCTAGTAGAAGCACAGGCTATCTTTGTGCTGCAACTGTTGACAACTTTGAACAGATACTGGACAACATCATAGAGGATCGAATTAGTCCTTCCGATCTGAGAAGGATCTGCATAGGTGTAAACTCACAAGTGATTTCAACTTATGCTCTTAATGATATTTTAATTGCACATCCATGTCCAGCAACACTCTCACGGTTCTCATTCAAAATTAAAAGTGATGACCAGCCATGCTCTCCTTTAGTGAACTCTCGATCAAGCGGTCTCAGAGTTTCAACAGCTGCTGGAGCAACAGCTGCAATGCTCTCAGCTGGCGGATTTCCAATGCCCATATTATCTCAGGACCTCCAGTATATGGTAAGAGAGCCCATTGCATCAGGAGCAGCCTCAAGATTAATGCATGGGTTTATCAAGCCTCACCAGTCCATGGAAGCTACATGGTTTTGTAAAGAGGGAATCATATACATTGATGGTACTCATGTCCGCTGTTCTGTAAAAAATGGGGATCGCATTGAGATATCTTCCAAGGCCCCAGTTTTGAAGGTTTTCTTGCCTCACCGTGTACAGCACGTTAGTGGTTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

314

Amino Acids

34.73

Weight (kDa)

8.15

Isoelectric Point (pI)

60.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAD_kinase	PF01513	72 - 104	2.2e-07	ATP-NAD kinase N-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000322)

Species	Orthologous Gene IDs
rosa_rugosa	Rorug01G0045800 Rorug01G0060200 Rorug01G0078200 Rorug01G0080300 Rorug01G0080500 Rorug01G0093600 Rorug01G0096100 Rorug01G0138500.1 Rorug01G0147900.1 Rorug01G0156300.1 Rorug01G0181600 Rorug01G0183600 Rorug01G0183600 Rorug01G0196000 Rorug01G0206200 Rorug01G0206200 Rorug01G0206300 Rorug01G0206400 Rorug01G0245700 Rorug01G0267300 Rorug01G0268000 Rorug01G0324700 Rorug01G0324800 Rorug02G0034400 Rorug02G0034500 Rorug02G0104900 Rorug02G0224800 Rorug02G0224900 Rorug02G0247400 Rorug02G0261500 Rorug02G0288300 Rorug02G0297300 Rorug02G0297400 Rorug02G0314900 Rorug02G0362700 Rorug02G0438500 Rorug02G0438600 Rorug02G0438700 Rorug02G0438800 Rorug02G0525300 Rorug02G0540100 Rorug03G0147100 Rorug03G0150900 Rorug03G0171600 Rorug03G0182000 Rorug03G0200200 Rorug03G0201100 Rorug03G0218400 Rorug03G0218700 Rorug03G0268200 Rorug03G0285500 Rorug03G0296600 Rorug03G0296700 Rorug03G0296800 Rorug03G0341800 Rorug03G0347200 Rorug03G0356300 Rorug04G0029100 Rorug04G0036300 Rorug04G0046500 Rorug04G0070100 Rorug04G0098900 Rorug04G0104400 Rorug04G0167800 Rorug04G0209300 Rorug04G0210700 Rorug04G0210800 Rorug04G0212500 Rorug05G0109400 Rorug05G0148500 Rorug05G0148800 Rorug05G0160200 Rorug05G0184600 Rorug05G0206100 Rorug05G0208500 Rorug05G0208500 Rorug05G0209500 Rorug05G0235800 Rorug05G0239200 Rorug05G0301100 Rorug05G0427000 Rorug05G0451700 Rorug05G0462300 Rorug05G0467300 Rorug05G0524100 Rorug05G0527400 Rorug05G0527500 Rorug05G0561800 Rorug05G0567700 Rorug05G0574200 Rorug06G0000900 Rorug06G0018700.1 Rorug06G0025100 Rorug06G0025200 Rorug06G0025500 Rorug06G0041300 Rorug06G0048100 Rorug06G0050800 Rorug06G0053900 Rorug06G0075200 Rorug06G0080600 Rorug06G0087500.1 Rorug06G0090000 Rorug06G0141200 Rorug06G0218300 Rorug07G0106700 Rorug07G0125500 Rorug07G0185500 Rorug07G0194000 Rorug07G0196600 Rorug07G0200600 Rorug07G0217300 Rorug07G0250300 Rorug07G0301900 Rorug07G0309100.1

Species

Orthologous Gene IDs

rosa_rugosa

Rorug01G0045800 Rorug01G0060200 Rorug01G0078200 Rorug01G0080300 Rorug01G0080500 Rorug01G0093600 Rorug01G0096100 Rorug01G0138500.1 Rorug01G0147900.1 Rorug01G0156300.1 Rorug01G0181600 Rorug01G0183600 Rorug01G0183600 Rorug01G0196000 Rorug01G0206200 Rorug01G0206200 Rorug01G0206300 Rorug01G0206400 Rorug01G0245700 Rorug01G0267300 Rorug01G0268000 Rorug01G0324700 Rorug01G0324800 Rorug02G0034400 Rorug02G0034500 Rorug02G0104900 Rorug02G0224800 Rorug02G0224900 Rorug02G0247400 Rorug02G0261500 Rorug02G0288300 Rorug02G0297300 Rorug02G0297400 Rorug02G0314900 Rorug02G0362700 Rorug02G0438500 Rorug02G0438600 Rorug02G0438700 Rorug02G0438800 Rorug02G0525300 Rorug02G0540100 Rorug03G0147100 Rorug03G0150900 Rorug03G0171600 Rorug03G0182000 Rorug03G0200200 Rorug03G0201100 Rorug03G0218400 Rorug03G0218700 Rorug03G0268200 Rorug03G0285500 Rorug03G0296600 Rorug03G0296700 Rorug03G0296800 Rorug03G0341800 Rorug03G0347200 Rorug03G0356300 Rorug04G0029100 Rorug04G0036300 Rorug04G0046500 Rorug04G0070100 Rorug04G0098900 Rorug04G0104400 Rorug04G0167800 Rorug04G0209300 Rorug04G0210700 Rorug04G0210800 Rorug04G0212500 Rorug05G0109400 Rorug05G0148500 Rorug05G0148800 Rorug05G0160200 Rorug05G0184600 Rorug05G0206100 Rorug05G0208500 Rorug05G0208500 Rorug05G0209500 Rorug05G0235800 Rorug05G0239200 Rorug05G0301100 Rorug05G0427000 Rorug05G0451700 Rorug05G0462300 Rorug05G0467300 Rorug05G0524100 Rorug05G0527400 Rorug05G0527500 Rorug05G0561800 Rorug05G0567700 Rorug05G0574200 Rorug06G0000900 Rorug06G0018700.1 Rorug06G0025100 Rorug06G0025200 Rorug06G0025500 Rorug06G0041300 Rorug06G0048100 Rorug06G0050800 Rorug06G0053900 Rorug06G0075200 Rorug06G0080600 Rorug06G0087500.1 Rorug06G0090000 Rorug06G0141200 Rorug06G0218300 Rorug07G0106700 Rorug07G0125500 Rorug07G0185500 Rorug07G0194000 Rorug07G0196600 Rorug07G0200600 Rorug07G0217300 Rorug07G0250300 Rorug07G0301900 Rorug07G0309100.1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	715, 787
AccI	GTMKAC	1 cut(s)	225
AciI	CCGC	3 cut(s)	621, 675, 844
AclWI	GGATC	3 cut(s)	447, 476, 873
AcsI	RAATTY	1 cut(s)	310
AcuI	CTGAAG	1 cut(s)	351
AfaI	GTAC	2 cut(s)	835, 924
AfiI	CCNNNNNNNGG	3 cut(s)	302, 715, 787
AgsI	TTSAA	5 cut(s)	413, 501, 568, 636, 901
AhdI	GACNNNNNGTC	1 cut(s)	70
AleI	CACNNNNGTG	1 cut(s)	933
AluBI	AGCT	7 cut(s)	53, 94, 185, 641, 656, 671, 794
AluI	AGCT	7 cut(s)	53, 94, 185, 641, 656, 671, 794
Alw21I	GWGCWC	1 cut(s)	126
Alw26I	GTCTC	2 cut(s)	78, 629
Alw44I	GTGCAC	1 cut(s)	122
AlwI	GGATC	3 cut(s)	447, 476, 873
AlwNI	CAGNNNCTG	2 cut(s)	421, 644
AoxI	GGCC	2 cut(s)	67, 888
ApaLI	GTGCAC	1 cut(s)	122
ApeKI	GCWGC	7 cut(s)	25, 160, 208, 392, 641, 656, 743
ApoI	RAATTY	1 cut(s)	310
AseI	ATTAAT	1 cut(s)	755
Asp700I	GAANNNNTTC	1 cut(s)	905
AspS9I	GGNCC	2 cut(s)	703, 889
AsuHPI	GGTGA	3 cut(s)	260, 770, 908
AsuNHI	GCTAGC	1 cut(s)	269
AvaII	GGWCC	1 cut(s)	703
BaeGI	GKGCMC	1 cut(s)	126
BaeI	ACNNNNGTAYC	2 cut(s)	825, 858
BanII	GRGCYC	1 cut(s)	729
Bbv12I	GWGCWC	1 cut(s)	126
BbvI	GCAGC	7 cut(s)	12, 147, 195, 379, 628, 643, 755
BccI	CCATC	3 cut(s)	221, 245, 824
BceAI	ACGGC	1 cut(s)	82
BcoDI	GTCTC	2 cut(s)	78, 629
BfaI	CTAG	4 cut(s)	188, 270, 302, 366
BfmI	CTRYAG	1 cut(s)	95
BisI	GCNGC	7 cut(s)	26, 161, 209, 393, 642, 657, 744
BlsI	GCNGC	7 cut(s)	27, 162, 210, 394, 643, 658, 745
Bme18I	GGWCC	1 cut(s)	703
BmeRI	GACNNNNNGTC	1 cut(s)	70
BmgT120I	GGNCC	2 cut(s)	703, 889
BmiI	GGNNCC	1 cut(s)	891
BmrI	ACTGGG	1 cut(s)	887
BmsI	GCATC	4 cut(s)	87, 121, 352, 743
BmtI	GCTAGC	1 cut(s)	273
BmuI	ACTGGG	1 cut(s)	887
BpmI	CTGGAG	4 cut(s)	67, 74, 666, 692
BpuEI	CTTGAG	1 cut(s)	733
BsaI	GGTCTC	1 cut(s)	629
BsaJI	CCNNGG	2 cut(s)	786, 885
Bsc4I	CCNNNNNNNGG	3 cut(s)	302, 715, 787
Bse1I	ACTGG	5 cut(s)	296, 426, 709, 781, 893
Bse3DI	GCAATG	3 cut(s)	358, 666, 729
BseDI	CCNNGG	2 cut(s)	786, 885
BseGI	GGATG	3 cut(s)	136, 213, 532
BseLI	CCNNNNNNNGG	3 cut(s)	302, 715, 787
BseMI	GCAATG	3 cut(s)	358, 666, 729
BseMII	CTCAG	4 cut(s)	452, 640, 681, 713
BseNI	ACTGG	5 cut(s)	296, 426, 709, 781, 893
BseRI	GAGGAG	2 cut(s)	22, 25
BseSI	GKGCMC	1 cut(s)	126
BseXI	GCAGC	7 cut(s)	12, 147, 195, 379, 628, 643, 755
BseYI	CCCAGC	1 cut(s)	49
BsgI	GTGCAG	1 cut(s)	146
BshFI	GGCC	2 cut(s)	69, 890
BsiHKAI	GWGCWC	1 cut(s)	126
BslI	CCNNNNNNNGG	3 cut(s)	302, 715, 787
BsmAI	GTCTC	2 cut(s)	78, 629
BsnI	GGCC	2 cut(s)	69, 890
Bso31I	GGTCTC	1 cut(s)	629
Bsp1286I	GDGCHC	2 cut(s)	126, 729
Bsp1407I	TGTACA	1 cut(s)	922
Bsp143I	GATC	6 cut(s)	199, 439, 457, 468, 614, 865
Bsp19I	CCATGG	1 cut(s)	786
BspACI	CCGC	3 cut(s)	621, 675, 844
BspANI	GGCC	2 cut(s)	69, 890
BspCNI	CTCAG	4 cut(s)	453, 639, 680, 712
BspLI	GGNNCC	1 cut(s)	891
BspOI	GCTAGC	1 cut(s)	273
BspPI	GGATC	3 cut(s)	447, 476, 873
BspTNI	GGTCTC	1 cut(s)	629
BsrDI	GCAATG	3 cut(s)	358, 666, 729
BsrGI	TGTACA	1 cut(s)	922
BsrI	ACTGG	5 cut(s)	296, 426, 709, 781, 893
BssECI	CCNNGG	2 cut(s)	786, 885
BssMI	GATC	6 cut(s)	199, 439, 457, 468, 614, 865
BssT1I	CCWWGG	2 cut(s)	786, 885
Bst4CI	ACNGT	5 cut(s)	36, 241, 400, 558, 920
Bst6I	CTCTTC	1 cut(s)	327
BstAPI	GCANNNNNTGC	1 cut(s)	656
BstAUI	TGTACA	1 cut(s)	922
BstC8I	GCNNGC	2 cut(s)	271, 673
BstDEI	CTNAG	5 cut(s)	203, 461, 626, 667, 699
BstDSI	CCRYGG	1 cut(s)	786
BstF5I	GGATG	3 cut(s)	136, 213, 532
BstKTI	GATC	6 cut(s)	202, 442, 460, 471, 617, 868
BstMAI	GTCTC	2 cut(s)	78, 629
BstMBI	GATC	6 cut(s)	199, 439, 457, 468, 614, 865
BstMWI	GCNNNNNNNGC	7 cut(s)	75, 84, 121, 166, 647, 656, 740
BstNSI	RCATGY	1 cut(s)	269
BstSFI	CTRYAG	1 cut(s)	95
BstSLI	GKGCMC	1 cut(s)	126
BstV1I	GCAGC	7 cut(s)	12, 147, 195, 379, 628, 643, 755
BstX2I	RGATCY	1 cut(s)	468
BstYI	RGATCY	1 cut(s)	468
BsuRI	GGCC	2 cut(s)	69, 890
BtgI	CCRYGG	1 cut(s)	786
BtsCI	GGATG	3 cut(s)	136, 213, 532
Cac8I	GCNNGC	2 cut(s)	271, 673
CaiI	CAGNNNCTG	2 cut(s)	421, 644
Cfr13I	GGNCC	2 cut(s)	703, 889
Csp6I	GTAC	2 cut(s)	834, 923
CviAII	CATG	7 cut(s)	266, 537, 591, 761, 787, 798, 839
CviQI	GTAC	2 cut(s)	834, 923
DdeI	CTNAG	5 cut(s)	203, 461, 626, 667, 699
DpnI	GATC	6 cut(s)	201, 441, 459, 470, 616, 867
DpnII	GATC	6 cut(s)	199, 439, 457, 468, 614, 865
DriI	GACNNNNNGTC	1 cut(s)	70
Eam1104I	CTCTTC	1 cut(s)	327
Eam1105I	GACNNNNNGTC	1 cut(s)	70
EarI	CTCTTC	1 cut(s)	327
EciI	GGCGGA	1 cut(s)	690
Eco130I	CCWWGG	2 cut(s)	786, 885
Eco24I	GRGCYC	1 cut(s)	729
Eco31I	GGTCTC	1 cut(s)	629
Eco32I	GATATC	1 cut(s)	879
Eco47I	GGWCC	1 cut(s)	703
Eco57I	CTGAAG	1 cut(s)	351
EcoO109I	RGGNCCY	2 cut(s)	703, 889
EcoRI	GAATTC	1 cut(s)	310
EcoRV	GATATC	1 cut(s)	879
EcoT14I	CCWWGG	2 cut(s)	786, 885
EcoT22I	ATGCAT	1 cut(s)	762
EcoT38I	GRGCYC	1 cut(s)	729
ErhI	CCWWGG	2 cut(s)	786, 885
FaeI	CATG	7 cut(s)	269, 540, 594, 764, 790, 801, 842
FalI	AAGNNNNNCTT	2 cut(s)	893, 925
FatI	CATG	7 cut(s)	265, 536, 590, 760, 786, 797, 838
FblI	GTMKAC	1 cut(s)	225
Fnu4HI	GCNGC	7 cut(s)	26, 161, 209, 393, 642, 657, 744
FokI	GGATG	3 cut(s)	143, 200, 519
FriOI	GRGCYC	1 cut(s)	729
Fsp4HI	GCNGC	7 cut(s)	26, 161, 209, 393, 642, 657, 744
FspBI	CTAG	4 cut(s)	188, 270, 302, 366
GluI	GCNGC	7 cut(s)	26, 161, 209, 393, 642, 657, 744
GsaI	CCCAGC	1 cut(s)	53
GsuI	CTGGAG	4 cut(s)	67, 74, 666, 692
HaeIII	GGCC	2 cut(s)	69, 890
Hin1II	CATG	7 cut(s)	269, 540, 594, 764, 790, 801, 842
HincII	GTYRAC	2 cut(s)	226, 403
HindII	GTYRAC	2 cut(s)	226, 403
HinfI	GANTC	2 cut(s)	287, 816
HphI	GGTGA	3 cut(s)	260, 770, 908
Hpy166II	GTNNAC	8 cut(s)	46, 124, 226, 260, 403, 484, 607, 923
Hpy188I	TCNGA	6 cut(s)	64, 150, 316, 457, 462, 629
Hpy188III	TCNNGA	4 cut(s)	612, 701, 738, 750
Hpy8I	GTNNAC	8 cut(s)	46, 124, 226, 260, 403, 484, 607, 923
Hpy99I	CGWCG	2 cut(s)	44, 68
HpyAV	CCTTC	3 cut(s)	459, 462, 895
HpyCH4III	ACNGT	5 cut(s)	36, 241, 400, 558, 920
HpyCH4IV	ACGT	2 cut(s)	42, 930
HpyCH4V	TGCA	9 cut(s)	124, 134, 163, 395, 474, 530, 659, 734, 760
HpyF10VI	GCNNNNNNNGC	7 cut(s)	75, 84, 121, 166, 647, 656, 740
HpyF3I	CTNAG	5 cut(s)	203, 461, 626, 667, 699
HpySE526I	ACGT	2 cut(s)	42, 930
Hsp92II	CATG	7 cut(s)	269, 540, 594, 764, 790, 801, 842
Kzo9I	GATC	6 cut(s)	199, 439, 457, 468, 614, 865
LmnI	GCTCC	2 cut(s)	647, 740
Lsp1109I	GCAGC	7 cut(s)	12, 147, 195, 379, 628, 643, 755
LweI	GCATC	4 cut(s)	87, 121, 352, 743
MaeI	CTAG	4 cut(s)	188, 270, 302, 366
MaeII	ACGT	2 cut(s)	42, 930
MaeIII	GTNAC	1 cut(s)	194
MalI	GATC	6 cut(s)	201, 441, 459, 470, 616, 867
MboI	GATC	6 cut(s)	199, 439, 457, 468, 614, 865
MboII	GAAGA	2 cut(s)	344, 873
MflI	RGATCY	1 cut(s)	468
MhlI	GDGCHC	2 cut(s)	126, 729
MluCI	AATT	4 cut(s)	310, 444, 525, 570
MlyI	GAGTC	1 cut(s)	281
MmeI	TCCRAC	1 cut(s)	87
MnlI	CCTC	9 cut(s)	3, 98, 328, 430, 716, 757, 786, 805, 924
Mph1103I	ATGCAT	1 cut(s)	762
MroXI	GAANNNNTTC	1 cut(s)	905
MseI	TTAA	4 cut(s)	513, 524, 573, 755
MslI	CAYNNNNRTG	4 cut(s)	129, 351, 535, 933
MspA1I	CMGCKG	4 cut(s)	641, 656, 671, 846
MwoI	GCNNNNNNNGC	7 cut(s)	75, 84, 121, 166, 647, 656, 740
NcoI	CCATGG	1 cut(s)	786
NdeII	GATC	6 cut(s)	199, 439, 457, 468, 614, 865
NheI	GCTAGC	1 cut(s)	269
NlaIII	CATG	7 cut(s)	269, 540, 594, 764, 790, 801, 842
NlaIV	GGNNCC	1 cut(s)	891
NsiI	ATGCAT	1 cut(s)	762
NspI	RCATGY	1 cut(s)	269
OliI	CACNNNNGTG	1 cut(s)	933
PdmI	GAANNNNTTC	1 cut(s)	905
PfeI	GAWTC	1 cut(s)	816
PflMI	CCANNNNNTGG	2 cut(s)	715, 787
PkrI	GCNGC	7 cut(s)	27, 162, 210, 394, 643, 658, 745
PleI	GAGTC	1 cut(s)	281
PpsI	GAGTC	1 cut(s)	281
PpuMI	RGGWCCY	1 cut(s)	703
PshBI	ATTAAT	1 cut(s)	755
Psp5II	RGGWCCY	1 cut(s)	703
PspFI	CCCAGC	1 cut(s)	49
PspN4I	GGNNCC	1 cut(s)	891
PspPI	GGNCC	2 cut(s)	703, 889
PspPPI	RGGWCCY	1 cut(s)	703
PstNI	CAGNNNCTG	2 cut(s)	421, 644
PsuI	RGATCY	1 cut(s)	468
PvuII	CAGCTG	3 cut(s)	641, 656, 671
RsaI	GTAC	2 cut(s)	835, 924
RsaNI	GTAC	2 cut(s)	834, 923
RseI	CAYNNNNRTG	4 cut(s)	129, 351, 535, 933
SalI	GTCGAC	1 cut(s)	224
SaqAI	TTAA	4 cut(s)	513, 524, 573, 755
SatI	GCNGC	7 cut(s)	26, 161, 209, 393, 642, 657, 744
Sau3AI	GATC	6 cut(s)	199, 439, 457, 468, 614, 865
Sau96I	GGNCC	2 cut(s)	703, 889
SchI	GAGTC	1 cut(s)	281
SduI	GDGCHC	2 cut(s)	126, 729
SfaNI	GCATC	4 cut(s)	87, 121, 352, 743
SfcI	CTRYAG	1 cut(s)	95
SinI	GGWCC	1 cut(s)	703
SmiMI	CAYNNNNRTG	4 cut(s)	129, 351, 535, 933
SmlI	CTYRAG	1 cut(s)	748
SmoI	CTYRAG	1 cut(s)	748
Sse9I	AATT	4 cut(s)	310, 444, 525, 570
SsiI	CCGC	3 cut(s)	621, 675, 844
SspI	AATATT	1 cut(s)	154
SspMI	CTAG	4 cut(s)	188, 270, 302, 366
StyI	CCWWGG	2 cut(s)	786, 885
TaaI	ACNGT	5 cut(s)	36, 241, 400, 558, 920
TaiI	ACGT	2 cut(s)	45, 933
TaqI	TCGA	4 cut(s)	39, 225, 442, 613
TasI	AATT	4 cut(s)	310, 444, 525, 570
TatI	WGTACW	1 cut(s)	922
TfiI	GAWTC	1 cut(s)	816
Tru1I	TTAA	4 cut(s)	513, 524, 573, 755
Tru9I	TTAA	4 cut(s)	513, 524, 573, 755
TseI	GCWGC	7 cut(s)	25, 160, 208, 392, 641, 656, 743
TspGWI	ACGGA	1 cut(s)	206
Van91I	CCANNNNNTGG	2 cut(s)	715, 787
VneI	GTGCAC	1 cut(s)	122
VpaK11BI	GGWCC	1 cut(s)	703
VspI	ATTAAT	1 cut(s)	755
XapI	RAATTY	1 cut(s)	310
XceI	RCATGY	1 cut(s)	269
XmiI	GTMKAC	1 cut(s)	225
XmnI	GAANNNNTTC	1 cut(s)	905
XspI	CTAG	4 cut(s)	188, 270, 302, 366
Zsp2I	ATGCAT	1 cut(s)	762

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.