Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000322

Physical Location & Seq

Genomic Coordinates Forward (+)

32980145 .. 32986651

Gene Structure 6507 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0297400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGATGGTCGATTTAGGCATCTCACTTGCAAGATTTGTGACCAGCTCGGACAGTTATGGTCCATTTCTTCTGGGATGGCTGGTCACCGGTTCATTTGGTCTTCTAGCTATCATCTTTGCATTTCTTAAATGGGAGAGAAGGACATCTCTGGATTGGGTTAAAGCTGCGGCTAGAGAAAAGAAGAAAGTCTGGAAGAAGCTAAGAGCTCCTCTGTCAACCCATACATGGATAGAAGATATTACTAATGGTGAACAGCCATCTACATGCTGTGTTTGCTTGACTTCCTTGGTGTTTCTTCAGAACCTAGGCACTAAAGCTTCATCGCGCACTTCTGTCCATCGTTGTGTAGTTTGTGGTGTGGCAGCTCATTCTTATTGTTCTGATTTTGCAGTAAAAGATTGCAAGTGTGTGGCACAAGCCGGTTCTACCCATGTTCGACACCACTGGTCAGAAAAATGGGTTAATATGGATGATAATCCTGAGATTTCTGCCTGCTGCTTCTATTGCGATGAGCCATGTGGTGTTCCTTTCCTTGATGCTTCTCCAACATGGCATTGTCTATGGTGTCAGAACCTCATACATGTCAGATGTCACAATAAAATGGCAAAAGAGTCTGGTGATGTTTGTGATCTTGGTACTCTTAGGAGGGTCATCCTTTCTCCTTTATGTGTAAAAGAAGTCGGTCACTTAAATGGAGGTGGAGTGCTGCGTTCAATAACAGATGAGTTTATAACTTCATCTGTTCGTGGCCAGTTTAGAAGAAAGCGTCATCGTTCTAAACATGGTAGTGGTCATTCAGCTAATTGTAACCCATCCAATGATGCTCTGGAGTATCTGTTCAATGGGCTTACTGGTATGAAGAAATCCCGTAGTGAGAAGAGTTTTGACCACTTGAAGGATGGCAGGGCACTGAGCGTTAAGGGTAACCATAATGGCTTTATGCAGAAAAAGGGTGGAATCGTCACCTATGGTCAATTTAAGAAATATAAAGTGGTTAATTTACCAAAGGATGCAAGGCCTCTTTTGGTTTTTATAAATGCCAGGAGTGGAGGCCAAAATGGGGCTTCTTTAAGGAGGAGGTTGAACATGCAATTGAATCCTGCACAGGTTTTTGAATTGAGTTCTTCTCAAGGGCCTGAGGTTGGTTTGGAATTGTTCAATGATGTGCAATACTTTAGAGTTTTGGTATGTGGTGGAGATGGCACTGTTGCATGGGTCCTTGATGCGATTGAGAAGCACAAATTCGAGTCACCCCCACCTGTTGCTATTATTCCCCTTGGCACAGGAAATGATTTGTCAAGGGTTCTGCAATGGGGAAGAGGCTTCTCTATCGTTGATGGACAAGGTGGCTTAACCACGCTTTTACATGACATTAACCATGCTGCAGTTACAATGCTAGATCGCTGGAAGGTAAACATCAAATCAGAAGCTGATCCAAATAAAGTGCAGTCCAAGTTTATGATGAACTATTTAGGTATTGGATGTGATGCGAAGGTTGCTTATGAATTTCATGTGATGAGAGAAATAAATCCTGAGAAGTTCAGTAGTCAGTTTGTGAATAAACTGCGATATGCCAAAGAAGGTGCTAGAGATATAATGGACCGAACTTGTGCCGACTTACCATGGCAAGTTTGGCTTGAAGTTGATGGGAAAGACATAGATATTCCAAAGGATTCTGAGGGTCTAATCGTGCTCAACATTGGCAGCTACATGGGTGGGGTGGATCTTTGGCAAAATGATATTGATCATGATGATGACTTTAGTCTTCAGTCAATGCATGATAAAATGCTTGAAGTTGTATGCATATGTGGATCGTGGCACCTTGGCAAACTACAGGTTGGACTATCACAAGCTAGGAGACTAGCCCAGGGGAATATCATAAGAATACATGCATCTAGTCCTTTTCCAGTCCAAATAGATGGGGAGCCATATATACAACAACCTGGCTGTATAGAGATAACACATCATGGGCAGGTGTTTATGTTGAGGAGGGCTTCAGAGGAGCCGAGAGGGCATGCAGCTGCAATCATGACGGAGGTTTTATTAGACGCCGAGTGTAAAGGCATCATTAATGCATCTCAGAAGAAAACACTTCTCCAGCAGATGGCTCTCCAGCTTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

707

Amino Acids

78.71

Weight (kDa)

8.53

Isoelectric Point (pI)

46.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C1_1	PF00130	147 - 206	1.1e-06	Phorbol esters/diacylglycerol binding domain (C1 domain)
DAGK_cat	PF00781	340 - 440	2.1e-26	Diacylglycerol kinase catalytic domain
DAGK_acc	PF00609	486 - 643	1.1e-57	Diacylglycerol kinase accessory domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000322)

Species	Orthologous Gene IDs
rosa_rugosa	Rorug01G0045800 Rorug01G0060200 Rorug01G0078200 Rorug01G0080300 Rorug01G0080500 Rorug01G0093600 Rorug01G0096100 Rorug01G0138500.1 Rorug01G0147900.1 Rorug01G0156300.1 Rorug01G0181600 Rorug01G0183600 Rorug01G0183600 Rorug01G0196000 Rorug01G0206200 Rorug01G0206200 Rorug01G0206300 Rorug01G0206400 Rorug01G0245700 Rorug01G0267300 Rorug01G0268000 Rorug01G0324700 Rorug01G0324800 Rorug02G0034400 Rorug02G0034500 Rorug02G0104900 Rorug02G0224800 Rorug02G0224900 Rorug02G0247400 Rorug02G0261500 Rorug02G0288300 Rorug02G0297300 Rorug02G0297400 Rorug02G0314900 Rorug02G0362700 Rorug02G0438500 Rorug02G0438600 Rorug02G0438700 Rorug02G0438800 Rorug02G0525300 Rorug02G0540100 Rorug03G0147100 Rorug03G0150900 Rorug03G0171600 Rorug03G0182000 Rorug03G0200200 Rorug03G0201100 Rorug03G0218400 Rorug03G0218700 Rorug03G0268200 Rorug03G0285500 Rorug03G0296600 Rorug03G0296700 Rorug03G0296800 Rorug03G0341800 Rorug03G0347200 Rorug03G0356300 Rorug04G0029100 Rorug04G0036300 Rorug04G0046500 Rorug04G0070100 Rorug04G0098900 Rorug04G0104400 Rorug04G0167800 Rorug04G0209300 Rorug04G0210700 Rorug04G0210800 Rorug04G0212500 Rorug05G0109400 Rorug05G0148500 Rorug05G0148800 Rorug05G0160200 Rorug05G0184600 Rorug05G0206100 Rorug05G0208500 Rorug05G0208500 Rorug05G0209500 Rorug05G0235800 Rorug05G0239200 Rorug05G0301100 Rorug05G0427000 Rorug05G0451700 Rorug05G0462300 Rorug05G0467300 Rorug05G0524100 Rorug05G0527400 Rorug05G0527500 Rorug05G0561800 Rorug05G0567700 Rorug05G0574200 Rorug06G0000900 Rorug06G0018700.1 Rorug06G0025100 Rorug06G0025200 Rorug06G0025500 Rorug06G0041300 Rorug06G0048100 Rorug06G0050800 Rorug06G0053900 Rorug06G0075200 Rorug06G0080600 Rorug06G0087500.1 Rorug06G0090000 Rorug06G0141200 Rorug06G0218300 Rorug07G0106700 Rorug07G0125500 Rorug07G0185500 Rorug07G0194000 Rorug07G0196600 Rorug07G0200600 Rorug07G0217300 Rorug07G0250300 Rorug07G0301900 Rorug07G0309100.1

Species

Orthologous Gene IDs

rosa_rugosa

Rorug01G0045800 Rorug01G0060200 Rorug01G0078200 Rorug01G0080300 Rorug01G0080500 Rorug01G0093600 Rorug01G0096100 Rorug01G0138500.1 Rorug01G0147900.1 Rorug01G0156300.1 Rorug01G0181600 Rorug01G0183600 Rorug01G0183600 Rorug01G0196000 Rorug01G0206200 Rorug01G0206200 Rorug01G0206300 Rorug01G0206400 Rorug01G0245700 Rorug01G0267300 Rorug01G0268000 Rorug01G0324700 Rorug01G0324800 Rorug02G0034400 Rorug02G0034500 Rorug02G0104900 Rorug02G0224800 Rorug02G0224900 Rorug02G0247400 Rorug02G0261500 Rorug02G0288300 Rorug02G0297300 Rorug02G0297400 Rorug02G0314900 Rorug02G0362700 Rorug02G0438500 Rorug02G0438600 Rorug02G0438700 Rorug02G0438800 Rorug02G0525300 Rorug02G0540100 Rorug03G0147100 Rorug03G0150900 Rorug03G0171600 Rorug03G0182000 Rorug03G0200200 Rorug03G0201100 Rorug03G0218400 Rorug03G0218700 Rorug03G0268200 Rorug03G0285500 Rorug03G0296600 Rorug03G0296700 Rorug03G0296800 Rorug03G0341800 Rorug03G0347200 Rorug03G0356300 Rorug04G0029100 Rorug04G0036300 Rorug04G0046500 Rorug04G0070100 Rorug04G0098900 Rorug04G0104400 Rorug04G0167800 Rorug04G0209300 Rorug04G0210700 Rorug04G0210800 Rorug04G0212500 Rorug05G0109400 Rorug05G0148500 Rorug05G0148800 Rorug05G0160200 Rorug05G0184600 Rorug05G0206100 Rorug05G0208500 Rorug05G0208500 Rorug05G0209500 Rorug05G0235800 Rorug05G0239200 Rorug05G0301100 Rorug05G0427000 Rorug05G0451700 Rorug05G0462300 Rorug05G0467300 Rorug05G0524100 Rorug05G0527400 Rorug05G0527500 Rorug05G0561800 Rorug05G0567700 Rorug05G0574200 Rorug06G0000900 Rorug06G0018700.1 Rorug06G0025100 Rorug06G0025200 Rorug06G0025500 Rorug06G0041300 Rorug06G0048100 Rorug06G0050800 Rorug06G0053900 Rorug06G0075200 Rorug06G0080600 Rorug06G0087500.1 Rorug06G0090000 Rorug06G0141200 Rorug06G0218300 Rorug07G0106700 Rorug07G0125500 Rorug07G0185500 Rorug07G0194000 Rorug07G0196600 Rorug07G0200600 Rorug07G0217300 Rorug07G0250300 Rorug07G0301900 Rorug07G0309100.1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	731, 1034
AarI	CACCTGC	1 cut(s)	1963
Acc36I	ACCTGC	1 cut(s)	1963
AccB1I	GGYRCC	1 cut(s)	1818
AccB7I	CCANNNNNTGG	1 cut(s)	2104
AccII	CGCG	1 cut(s)	325
AciI	CCGC	1 cut(s)	167
AclWI	GGATC	3 cut(s)	1427, 1731, 1819
AcoI	YGGCCR	1 cut(s)	748
AcsI	RAATTY	2 cut(s)	1241, 1505
AcuI	CTGAAG	3 cut(s)	281, 1751, 1980
AcyI	GRCGYC	1 cut(s)	2049
AfaI	GTAC	1 cut(s)	637
AfiI	CCNNNNNNNGG	5 cut(s)	225, 895, 1060, 1142, 2104
AflIII	ACRYGT	1 cut(s)	580
AgeI	ACCGGT	1 cut(s)	86
AgsI	TTSAA	9 cut(s)	714, 841, 895, 1084, 1096, 1115, 1159, 1640, 1793
AjnI	CCWGG	3 cut(s)	1040, 1866, 1942
AloI	GAACNNNNNNTCC	2 cut(s)	821, 853
Alw21I	GWGCWC	2 cut(s)	208, 1695
Alw26I	GTCTC	1 cut(s)	1852
AlwI	GGATC	3 cut(s)	1427, 1731, 1819
AlwNI	CAGNNNCTG	1 cut(s)	1430
AoxI	GGCC	4 cut(s)	748, 1016, 1051, 1133
ApeKI	GCWGC	8 cut(s)	164, 362, 495, 706, 1382, 1704, 2018, 2021
ApoI	RAATTY	2 cut(s)	1241, 1505
AseI	ATTAAT	1 cut(s)	2070
AsiGI	ACCGGT	1 cut(s)	86
AspA2I	CCTAGG	1 cut(s)	304
AspLEI	GCGC	1 cut(s)	327
AspS9I	GGNCC	4 cut(s)	59, 1133, 1216, 1600
AsuHPI	GGTGA	5 cut(s)	76, 260, 629, 955, 1242
AvaII	GGWCC	3 cut(s)	59, 1216, 1600
AvrII	CCTAGG	1 cut(s)	304
AxyI	CCTNAGG	1 cut(s)	1137
BaeGI	GKGCMC	1 cut(s)	910
BalI	TGGCCA	1 cut(s)	750
BanI	GGYRCC	1 cut(s)	1818
BanII	GRGCYC	1 cut(s)	208
BbsI	GAAGAC	2 cut(s)	92, 1757
Bbv12I	GWGCWC	2 cut(s)	208, 1695
BbvI	GCAGC	8 cut(s)	151, 374, 482, 693, 1369, 1716, 2008, 2030
BciT130I	CCWGG	3 cut(s)	1042, 1868, 1944
BclI	TGATCA	1 cut(s)	1744
BcoDI	GTCTC	1 cut(s)	1852
BfaI	CTAG	8 cut(s)	104, 171, 305, 1397, 1587, 1854, 1862, 1896
BfmI	CTRYAG	2 cut(s)	1383, 1832
BfuAI	ACCTGC	1 cut(s)	1963
BglI	GCCNNNNNGGC	1 cut(s)	2011
BisI	GCNGC	9 cut(s)	165, 168, 363, 496, 707, 1383, 1705, 2019, 2022
BlnI	CCTAGG	1 cut(s)	304
BlsI	GCNGC	9 cut(s)	166, 169, 364, 497, 708, 1384, 1706, 2020, 2023
Bme1390I	CCNGG	3 cut(s)	1042, 1868, 1944
Bme18I	GGWCC	3 cut(s)	59, 1216, 1600
BmgT120I	GGNCC	4 cut(s)	59, 1133, 1216, 1600
BmiI	GGNNCC	4 cut(s)	1217, 1820, 1926, 2004
BmrFI	CCNGG	3 cut(s)	1042, 1868, 1944
BmsI	GCATC	9 cut(s)	27, 526, 811, 1000, 1213, 1477, 1901, 2073, 2084
BoxI	GACNNNNGTC	1 cut(s)	1761
BpiI	GAAGAC	2 cut(s)	92, 1757
BplI	GAGNNNNNCTC	2 cut(s)	1111, 1143
BpmI	CTGGAG	3 cut(s)	848, 2081, 2096
BpuEI	CTTGAG	1 cut(s)	1113
BsaBI	GATNNNNATC	2 cut(s)	474, 1743
BsaHI	GRCGYC	1 cut(s)	2049
BsaJI	CCNNGG	7 cut(s)	285, 304, 1276, 1622, 1822, 1866, 1867
BsaWI	WCCGGW	1 cut(s)	86
BsaXI	ACNNNNNCTCC	4 cut(s)	687, 717, 821, 851
Bsc4I	CCNNNNNNNGG	5 cut(s)	225, 895, 1060, 1142, 2104
Bse118I	RCCGGY	2 cut(s)	86, 419
Bse1I	ACTGG	4 cut(s)	449, 751, 856, 1907
Bse21I	CCTNAGG	1 cut(s)	1137
Bse3DI	GCAATG	1 cut(s)	1316
Bse8I	GATNNNNATC	2 cut(s)	474, 1743
BseBI	CCWGG	3 cut(s)	1042, 1868, 1944
BseDI	CCNNGG	7 cut(s)	285, 304, 1276, 1622, 1822, 1866, 1867
BseGI	GGATG	7 cut(s)	80, 475, 651, 812, 904, 1015, 1487
BseJI	GATNNNNATC	2 cut(s)	474, 1743
BseLI	CCNNNNNNNGG	5 cut(s)	225, 895, 1060, 1142, 2104
BseMI	GCAATG	1 cut(s)	1316
BseMII	CTCAG	6 cut(s)	471, 902, 1128, 1524, 1668, 2093
BseNI	ACTGG	4 cut(s)	449, 751, 856, 1907
BseRI	GAGGAG	4 cut(s)	198, 1090, 2002, 2015
BseSI	GKGCMC	1 cut(s)	910
BseXI	GCAGC	8 cut(s)	151, 374, 482, 693, 1369, 1716, 2008, 2030
BsgI	GTGCAG	2 cut(s)	1086, 1466
Bsh1236I	CGCG	1 cut(s)	325
BshFI	GGCC	4 cut(s)	750, 1018, 1053, 1135
BshNI	GGYRCC	1 cut(s)	1818
BshTI	ACCGGT	1 cut(s)	86
BsiHKAI	GWGCWC	2 cut(s)	208, 1695
BsiSI	CCGG	2 cut(s)	87, 420
BslI	CCNNNNNNNGG	5 cut(s)	225, 895, 1060, 1142, 2104
BsmAI	GTCTC	1 cut(s)	1852
BsnI	GGCC	4 cut(s)	750, 1018, 1053, 1135
Bsp1286I	GDGCHC	3 cut(s)	208, 910, 1695
Bsp143I	GATC	6 cut(s)	628, 1399, 1432, 1723, 1744, 1811
Bsp19I	CCATGG	1 cut(s)	1622
BspACI	CCGC	1 cut(s)	167
BspANI	GGCC	4 cut(s)	750, 1018, 1053, 1135
BspCNI	CTCAG	6 cut(s)	472, 903, 1129, 1525, 1669, 2092
BspFNI	CGCG	1 cut(s)	325
BspHI	TCATGA	2 cut(s)	1747, 2028
BspLI	GGNNCC	4 cut(s)	1217, 1820, 1926, 2004
BspMAI	CTGCAG	1 cut(s)	1387
BspMI	ACCTGC	1 cut(s)	1963
BspPI	GGATC	3 cut(s)	1427, 1731, 1819
BspT107I	GGYRCC	1 cut(s)	1818
BsrDI	GCAATG	1 cut(s)	1316
BsrFI	RCCGGY	2 cut(s)	86, 419
BsrI	ACTGG	4 cut(s)	449, 751, 856, 1907
BssAI	RCCGGY	2 cut(s)	86, 419
BssECI	CCNNGG	7 cut(s)	285, 304, 1276, 1622, 1822, 1866, 1867
BssMI	GATC	6 cut(s)	628, 1399, 1432, 1723, 1744, 1811
BssNI	GRCGYC	1 cut(s)	2049
BssT1I	CCWWGG	5 cut(s)	285, 304, 1276, 1622, 1822
Bst2UI	CCWGG	3 cut(s)	1042, 1868, 1944
Bst4CI	ACNGT	2 cut(s)	53, 1207
Bst6I	CTCTTC	2 cut(s)	872, 1312
BstACI	GRCGYC	1 cut(s)	2049
BstC8I	GCNNGC	3 cut(s)	493, 2016, 2118
BstDEI	CTNAG	8 cut(s)	200, 480, 641, 911, 1137, 1533, 1677, 2079
BstDSI	CCRYGG	1 cut(s)	1622
BstEII	GGTNACC	2 cut(s)	82, 923
BstF5I	GGATG	7 cut(s)	80, 475, 651, 812, 904, 1015, 1487
BstFNI	CGCG	1 cut(s)	325
BstHHI	GCGC	1 cut(s)	327
BstKTI	GATC	6 cut(s)	631, 1402, 1435, 1726, 1747, 1814
BstMAI	GTCTC	1 cut(s)	1852
BstMBI	GATC	6 cut(s)	628, 1399, 1432, 1723, 1744, 1811
BstMWI	GCNNNNNNNGC	5 cut(s)	273, 504, 1496, 1633, 2011
BstNI	CCWGG	3 cut(s)	1042, 1868, 1944
BstNSI	RCATGY	5 cut(s)	267, 584, 1090, 1892, 2018
BstPAI	GACNNNNGTC	1 cut(s)	1761
BstPI	GGTNACC	2 cut(s)	82, 923
BstSCI	CCNGG	3 cut(s)	1040, 1866, 1942
BstSFI	CTRYAG	2 cut(s)	1383, 1832
BstSLI	GKGCMC	1 cut(s)	910
BstUI	CGCG	1 cut(s)	325
BstV1I	GCAGC	8 cut(s)	151, 374, 482, 693, 1369, 1716, 2008, 2030
BstV2I	GAAGAC	2 cut(s)	92, 1757
BstX2I	RGATCY	1 cut(s)	1723
BstXI	CCANNNNNNTGG	1 cut(s)	1919
BstYI	RGATCY	1 cut(s)	1723
Bsu36I	CCTNAGG	1 cut(s)	1137
BsuRI	GGCC	4 cut(s)	750, 1018, 1053, 1135
BtgI	CCRYGG	1 cut(s)	1622
BtgZI	GCGATG	2 cut(s)	306, 522
BtsCI	GGATG	7 cut(s)	80, 475, 651, 812, 904, 1015, 1487
BtsIMutI	CAGTG	3 cut(s)	442, 908, 1203
BveI	ACCTGC	1 cut(s)	1963
Cac8I	GCNNGC	3 cut(s)	493, 2016, 2118
CaiI	CAGNNNCTG	1 cut(s)	1430
CciI	TCATGA	2 cut(s)	1747, 2028
CfoI	GCGC	1 cut(s)	327
Cfr10I	RCCGGY	2 cut(s)	86, 419
Cfr13I	GGNCC	4 cut(s)	59, 1133, 1216, 1600
CseI	GACGC	2 cut(s)	755, 2057
Csp6I	GTAC	1 cut(s)	636
CspAI	ACCGGT	1 cut(s)	86
CviQI	GTAC	1 cut(s)	636
DdeI	CTNAG	8 cut(s)	200, 480, 641, 911, 1137, 1533, 1677, 2079
DpnI	GATC	6 cut(s)	630, 1401, 1434, 1725, 1746, 1813
DpnII	GATC	6 cut(s)	628, 1399, 1432, 1723, 1744, 1811
EaeI	YGGCCR	1 cut(s)	748
Eam1104I	CTCTTC	2 cut(s)	872, 1312
EarI	CTCTTC	2 cut(s)	872, 1312
Ecl136II	GAGCTC	1 cut(s)	206
Eco130I	CCWWGG	5 cut(s)	285, 304, 1276, 1622, 1822
Eco147I	AGGCCT	1 cut(s)	1018
Eco24I	GRGCYC	1 cut(s)	208
Eco47I	GGWCC	3 cut(s)	59, 1216, 1600
Eco53kI	GAGCTC	1 cut(s)	206
Eco57I	CTGAAG	3 cut(s)	281, 1751, 1980
Eco81I	CCTNAGG	1 cut(s)	1137
Eco91I	GGTNACC	2 cut(s)	82, 923
EcoICRI	GAGCTC	1 cut(s)	206
EcoO109I	RGGNCCY	2 cut(s)	1133, 1216
EcoO65I	GGTNACC	2 cut(s)	82, 923
EcoRII	CCWGG	3 cut(s)	1040, 1866, 1942
EcoT14I	CCWWGG	5 cut(s)	285, 304, 1276, 1622, 1822
EcoT22I	ATGCAT	4 cut(s)	1779, 1805, 1894, 2077
EcoT38I	GRGCYC	1 cut(s)	208
ErhI	CCWWGG	5 cut(s)	285, 304, 1276, 1622, 1822
FalI	AAGNNNNNCTT	2 cut(s)	1620, 1652
FauNDI	CATATG	1 cut(s)	1805
FbaI	TGATCA	1 cut(s)	1744
Fnu4HI	GCNGC	9 cut(s)	165, 168, 363, 496, 707, 1383, 1705, 2019, 2022
FokI	GGATG	7 cut(s)	87, 482, 638, 799, 911, 1022, 1494
FriOI	GRGCYC	1 cut(s)	208
Fsp4HI	GCNGC	9 cut(s)	165, 168, 363, 496, 707, 1383, 1705, 2019, 2022
FspBI	CTAG	8 cut(s)	104, 171, 305, 1397, 1587, 1854, 1862, 1896
GlaI	GCGC	1 cut(s)	326
GluI	GCNGC	9 cut(s)	165, 168, 363, 496, 707, 1383, 1705, 2019, 2022
GsuI	CTGGAG	3 cut(s)	848, 2081, 2096
HaeIII	GGCC	4 cut(s)	750, 1018, 1053, 1135
HapII	CCGG	2 cut(s)	87, 420
HgaI	GACGC	2 cut(s)	755, 2057
HhaI	GCGC	1 cut(s)	327
Hin1I	GRCGYC	1 cut(s)	2049
Hin6I	GCGC	1 cut(s)	325
HinP1I	GCGC	1 cut(s)	325
HincII	GTYRAC	1 cut(s)	216
HindII	GTYRAC	1 cut(s)	216
HindIII	AAGCTT	1 cut(s)	315
HinfI	GANTC	5 cut(s)	611, 957, 1096, 1247, 1673
HpaII	CCGG	2 cut(s)	87, 420
HphI	GGTGA	5 cut(s)	76, 260, 629, 955, 1242
Hpy166II	GTNNAC	3 cut(s)	216, 251, 1414
Hpy188III	TCNNGA	7 cut(s)	149, 190, 479, 827, 1532, 1748, 2029
Hpy8I	GTNNAC	3 cut(s)	216, 251, 1414
HpyAV	CCTTC	5 cut(s)	132, 889, 1402, 1486, 1574
HpyCH4III	ACNGT	2 cut(s)	53, 1207
HpyF10VI	GCNNNNNNNGC	5 cut(s)	273, 504, 1496, 1633, 2011
HpyF3I	CTNAG	8 cut(s)	200, 480, 641, 911, 1137, 1533, 1677, 2079
Hsp92I	GRCGYC	1 cut(s)	2049
HspAI	GCGC	1 cut(s)	325
Ksp22I	TGATCA	1 cut(s)	1744
Kzo9I	GATC	6 cut(s)	628, 1399, 1432, 1723, 1744, 1811
LmnI	GCTCC	3 cut(s)	211, 1924, 2002
Lsp1109I	GCAGC	8 cut(s)	151, 374, 482, 693, 1369, 1716, 2008, 2030
LweI	GCATC	9 cut(s)	27, 526, 811, 1000, 1213, 1477, 1901, 2073, 2084
MaeI	CTAG	8 cut(s)	104, 171, 305, 1397, 1587, 1854, 1862, 1896
MaeIII	GTNAC	9 cut(s)	37, 82, 590, 683, 806, 923, 961, 1248, 1387
MalI	GATC	6 cut(s)	630, 1401, 1434, 1725, 1746, 1813
MboI	GATC	6 cut(s)	628, 1399, 1432, 1723, 1744, 1811
MfeI	CAATTG	1 cut(s)	1091
MflI	RGATCY	1 cut(s)	1723
MhlI	GDGCHC	3 cut(s)	208, 910, 1695
MlsI	TGGCCA	1 cut(s)	750
MluCI	AATT	8 cut(s)	802, 974, 997, 1091, 1115, 1151, 1241, 1505
MluNI	TGGCCA	1 cut(s)	750
MlyI	GAGTC	2 cut(s)	620, 1256
MmeI	TCCRAC	2 cut(s)	569, 1819
Mox20I	TGGCCA	1 cut(s)	750
Mph1103I	ATGCAT	4 cut(s)	1779, 1805, 1894, 2077
MscI	TGGCCA	1 cut(s)	750
MslI	CAYNNNNRTG	5 cut(s)	262, 342, 690, 786, 1752
Msp20I	TGGCCA	1 cut(s)	750
MspA1I	CMGCKG	1 cut(s)	2021
MspI	CCGG	2 cut(s)	87, 420
MspR9I	CCNGG	3 cut(s)	1042, 1868, 1944
MunI	CAATTG	1 cut(s)	1091
MvaI	CCWGG	3 cut(s)	1042, 1868, 1944
MvnI	CGCG	1 cut(s)	325
MwoI	GCNNNNNNNGC	5 cut(s)	273, 504, 1496, 1633, 2011
NcoI	CCATGG	1 cut(s)	1622
NdeI	CATATG	1 cut(s)	1805
NdeII	GATC	6 cut(s)	628, 1399, 1432, 1723, 1744, 1811
NlaIV	GGNNCC	4 cut(s)	1217, 1820, 1926, 2004
NmeAIII	GCCGAG	2 cut(s)	2031, 2077
NmuCI	GTSAC	6 cut(s)	37, 82, 590, 683, 961, 1248
NsiI	ATGCAT	4 cut(s)	1779, 1805, 1894, 2077
NspI	RCATGY	5 cut(s)	267, 584, 1090, 1892, 2018
PaeI	GCATGC	1 cut(s)	2018
PagI	TCATGA	2 cut(s)	1747, 2028
PaqCI	CACCTGC	1 cut(s)	1963
PasI	CCCWGGG	1 cut(s)	1867
PceI	AGGCCT	1 cut(s)	1018
PciI	ACATGT	1 cut(s)	580
PfeI	GAWTC	3 cut(s)	957, 1096, 1673
PflMI	CCANNNNNTGG	1 cut(s)	2104
PinAI	ACCGGT	1 cut(s)	86
PkrI	GCNGC	9 cut(s)	166, 169, 364, 497, 708, 1384, 1706, 2020, 2023
PleI	GAGTC	2 cut(s)	619, 1255
PpsI	GAGTC	2 cut(s)	619, 1255
PpuMI	RGGWCCY	1 cut(s)	1216
PscI	ACATGT	1 cut(s)	580
PshAI	GACNNNNGTC	1 cut(s)	1761
PshBI	ATTAAT	1 cut(s)	2070
PsiI	TTATAA	2 cut(s)	731, 1034
Psp124BI	GAGCTC	1 cut(s)	208
Psp5II	RGGWCCY	1 cut(s)	1216
Psp6I	CCWGG	3 cut(s)	1040, 1866, 1942
PspEI	GGTNACC	2 cut(s)	82, 923
PspGI	CCWGG	3 cut(s)	1040, 1866, 1942
PspN4I	GGNNCC	4 cut(s)	1217, 1820, 1926, 2004
PspPI	GGNCC	4 cut(s)	59, 1133, 1216, 1600
PspPPI	RGGWCCY	1 cut(s)	1216
PstI	CTGCAG	1 cut(s)	1387
PstNI	CAGNNNCTG	1 cut(s)	1430
PsuI	RGATCY	1 cut(s)	1723
PvuII	CAGCTG	1 cut(s)	2021
RsaI	GTAC	1 cut(s)	637
RsaNI	GTAC	1 cut(s)	636
RseI	CAYNNNNRTG	5 cut(s)	262, 342, 690, 786, 1752
SacI	GAGCTC	1 cut(s)	208
SatI	GCNGC	9 cut(s)	165, 168, 363, 496, 707, 1383, 1705, 2019, 2022
Sau3AI	GATC	6 cut(s)	628, 1399, 1432, 1723, 1744, 1811
Sau96I	GGNCC	4 cut(s)	59, 1133, 1216, 1600
SchI	GAGTC	2 cut(s)	620, 1256
ScrFI	CCNGG	3 cut(s)	1042, 1868, 1944
SduI	GDGCHC	3 cut(s)	208, 910, 1695
SfaNI	GCATC	9 cut(s)	27, 526, 811, 1000, 1213, 1477, 1901, 2073, 2084
SfcI	CTRYAG	2 cut(s)	1383, 1832
SinI	GGWCC	3 cut(s)	59, 1216, 1600
SmiMI	CAYNNNNRTG	5 cut(s)	262, 342, 690, 786, 1752
SmlI	CTYRAG	1 cut(s)	1128
SmoI	CTYRAG	1 cut(s)	1128
SphI	GCATGC	1 cut(s)	2018
Sse9I	AATT	8 cut(s)	802, 974, 997, 1091, 1115, 1151, 1241, 1505
SseBI	AGGCCT	1 cut(s)	1018
SsiI	CCGC	1 cut(s)	167
SspMI	CTAG	8 cut(s)	104, 171, 305, 1397, 1587, 1854, 1862, 1896
SstI	GAGCTC	1 cut(s)	208
StuI	AGGCCT	1 cut(s)	1018
StyD4I	CCNGG	3 cut(s)	1040, 1866, 1942
StyI	CCWWGG	5 cut(s)	285, 304, 1276, 1622, 1822
TaaI	ACNGT	2 cut(s)	53, 1207
TaqI	TCGA	3 cut(s)	9, 436, 1245
TaqII	GACCGA	2 cut(s)	671, 1617
TasI	AATT	8 cut(s)	802, 974, 997, 1091, 1115, 1151, 1241, 1505
TauI	GCSGC	1 cut(s)	170
TfiI	GAWTC	3 cut(s)	957, 1096, 1673
TscAI	CASTG	3 cut(s)	449, 915, 1210
TseFI	GTSAC	6 cut(s)	37, 82, 590, 683, 961, 1248
TseI	GCWGC	8 cut(s)	164, 362, 495, 706, 1382, 1704, 2018, 2021
Tsp45I	GTSAC	6 cut(s)	37, 82, 590, 683, 961, 1248
TspDTI	ATGAA	7 cut(s)	81, 309, 726, 872, 1478, 1499, 1518
TspGWI	ACGGA	1 cut(s)	2048
TspRI	CASTG	3 cut(s)	449, 915, 1210
Van91I	CCANNNNNTGG	1 cut(s)	2104
VpaK11BI	GGWCC	3 cut(s)	59, 1216, 1600
VspI	ATTAAT	1 cut(s)	2070
XapI	RAATTY	2 cut(s)	1241, 1505
XceI	RCATGY	5 cut(s)	267, 584, 1090, 1892, 2018
XcmI	CCANNNNNNNNNTGG	3 cut(s)	823, 896, 1629
XmaJI	CCTAGG	1 cut(s)	304
XspI	CTAG	8 cut(s)	104, 171, 305, 1397, 1587, 1854, 1862, 1896
Zsp2I	ATGCAT	4 cut(s)	1779, 1805, 1894, 2077

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.