Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0000322

Physical Location & Seq

Genomic Coordinates Forward (+)

13053683 .. 13056416

Gene Structure 2734 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0080300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1098 bp

ATGGATGAGCTTGTTGGTATGAATTTCCTACCGCCGCGACTTGGAGTCTGGAGACTTGGACTCTTGGAGCACAGAGGCGCAGAGCAGTCCGACTCAGCGACCCGGCGATCTGCAAAAGTGCAAGGCTGGAAGCCTGGAACCAGCAACCCATCTCCGGTCTCCGAGCTCCCCACCGCCACCAGCAACCCGTCTGGGCCGTCTGGCTGTCTCTGTGGTTCTTGCATTGCTGAAAGTCAAGACACTGGGTCTTCGGCAACCTCATCAAGATTTGCAGTTGGCCAGTTGTCTACTTATCTGGCCTCAGGCCTGCAATTTCAATATCATCAACAGGTGGACTGCATTGTGTTCGACAAGACAGGGACTCTTACAATTGGGAAGCCACTGGTTGTTAACACACGACTCATGAAAAATATAGTGCTTCGAGAATTCTATGAACTTGTTGCTGCAGCTGAGGTTAACAGTGAACACCCCTTGGCCAAGGCCATTGTTGAGTATGCCAAAAAATTCAGAGAAGATGAAGAGAATCCAGCCGGGCCAGAAGCGCATGACTTTGCCTCCATTACTGGTCACGGGGTGAAGGCTATTGTTCAGGGCAGGGAAATAATTGTGGGGAACAAGAGCTTGTTGGTGGACCAGAACATTGCAGTTCCACTCGATGCAGAAGACTACCTAGCAGAAGCTGAAGGGCTGGCTCAAACTGGGATTCTAGTAGCCATAGATGGAGAAGTGGCTGGAGTTCTAGCAATATCTGATCCACTGAAACCAGGTGCTCAAGAAGTAATTACCATACTCAAGTCAATGAATGTTAGAAGCATAATGGTGACAGGTGACAATTGGGGAATTGCAAATTCTATTGCCAATGAAGTTGGTATTGATACTGTTATAGCCGAAGCGAAACCTGATCACCAGAAAGCAGAGAAAGTGAAGGAATTGCAGGCCTCAGGCTACACTGTGGTGATGGTGGGAGATGGCATCAATGACTCACCAGCACTTGTGGCGGCAGATGTAGGAATGGCAATTGGTGCTGGCACTAACATTGCAATTGAGGCAGCAGACATTGTGCTAATGAAGAGTAGGTTTCCTCTTTATTTTCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

365

Amino Acids

38.63

Weight (kDa)

4.87

Isoelectric Point (pI)

30.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hydrolase	PF00702	111 - 335	1e-32	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000322)

Species	Orthologous Gene IDs
rosa_rugosa	Rorug01G0045800 Rorug01G0060200 Rorug01G0078200 Rorug01G0080300 Rorug01G0080500 Rorug01G0093600 Rorug01G0096100 Rorug01G0138500.1 Rorug01G0147900.1 Rorug01G0156300.1 Rorug01G0181600 Rorug01G0183600 Rorug01G0183600 Rorug01G0196000 Rorug01G0206200 Rorug01G0206200 Rorug01G0206300 Rorug01G0206400 Rorug01G0245700 Rorug01G0267300 Rorug01G0268000 Rorug01G0324700 Rorug01G0324800 Rorug02G0034400 Rorug02G0034500 Rorug02G0104900 Rorug02G0224800 Rorug02G0224900 Rorug02G0247400 Rorug02G0261500 Rorug02G0288300 Rorug02G0297300 Rorug02G0297400 Rorug02G0314900 Rorug02G0362700 Rorug02G0438500 Rorug02G0438600 Rorug02G0438700 Rorug02G0438800 Rorug02G0525300 Rorug02G0540100 Rorug03G0147100 Rorug03G0150900 Rorug03G0171600 Rorug03G0182000 Rorug03G0200200 Rorug03G0201100 Rorug03G0218400 Rorug03G0218700 Rorug03G0268200 Rorug03G0285500 Rorug03G0296600 Rorug03G0296700 Rorug03G0296800 Rorug03G0341800 Rorug03G0347200 Rorug03G0356300 Rorug04G0029100 Rorug04G0036300 Rorug04G0046500 Rorug04G0070100 Rorug04G0098900 Rorug04G0104400 Rorug04G0167800 Rorug04G0209300 Rorug04G0210700 Rorug04G0210800 Rorug04G0212500 Rorug05G0109400 Rorug05G0148500 Rorug05G0148800 Rorug05G0160200 Rorug05G0184600 Rorug05G0206100 Rorug05G0208500 Rorug05G0208500 Rorug05G0209500 Rorug05G0235800 Rorug05G0239200 Rorug05G0301100 Rorug05G0427000 Rorug05G0451700 Rorug05G0462300 Rorug05G0467300 Rorug05G0524100 Rorug05G0527400 Rorug05G0527500 Rorug05G0561800 Rorug05G0567700 Rorug05G0574200 Rorug06G0000900 Rorug06G0018700.1 Rorug06G0025100 Rorug06G0025200 Rorug06G0025500 Rorug06G0041300 Rorug06G0048100 Rorug06G0050800 Rorug06G0053900 Rorug06G0075200 Rorug06G0080600 Rorug06G0087500.1 Rorug06G0090000 Rorug06G0141200 Rorug06G0218300 Rorug07G0106700 Rorug07G0125500 Rorug07G0185500 Rorug07G0194000 Rorug07G0196600 Rorug07G0200600 Rorug07G0217300 Rorug07G0250300 Rorug07G0301900 Rorug07G0309100.1

Species

Orthologous Gene IDs

rosa_rugosa

Rorug01G0045800 Rorug01G0060200 Rorug01G0078200 Rorug01G0080300 Rorug01G0080500 Rorug01G0093600 Rorug01G0096100 Rorug01G0138500.1 Rorug01G0147900.1 Rorug01G0156300.1 Rorug01G0181600 Rorug01G0183600 Rorug01G0183600 Rorug01G0196000 Rorug01G0206200 Rorug01G0206200 Rorug01G0206300 Rorug01G0206400 Rorug01G0245700 Rorug01G0267300 Rorug01G0268000 Rorug01G0324700 Rorug01G0324800 Rorug02G0034400 Rorug02G0034500 Rorug02G0104900 Rorug02G0224800 Rorug02G0224900 Rorug02G0247400 Rorug02G0261500 Rorug02G0288300 Rorug02G0297300 Rorug02G0297400 Rorug02G0314900 Rorug02G0362700 Rorug02G0438500 Rorug02G0438600 Rorug02G0438700 Rorug02G0438800 Rorug02G0525300 Rorug02G0540100 Rorug03G0147100 Rorug03G0150900 Rorug03G0171600 Rorug03G0182000 Rorug03G0200200 Rorug03G0201100 Rorug03G0218400 Rorug03G0218700 Rorug03G0268200 Rorug03G0285500 Rorug03G0296600 Rorug03G0296700 Rorug03G0296800 Rorug03G0341800 Rorug03G0347200 Rorug03G0356300 Rorug04G0029100 Rorug04G0036300 Rorug04G0046500 Rorug04G0070100 Rorug04G0098900 Rorug04G0104400 Rorug04G0167800 Rorug04G0209300 Rorug04G0210700 Rorug04G0210800 Rorug04G0212500 Rorug05G0109400 Rorug05G0148500 Rorug05G0148800 Rorug05G0160200 Rorug05G0184600 Rorug05G0206100 Rorug05G0208500 Rorug05G0208500 Rorug05G0209500 Rorug05G0235800 Rorug05G0239200 Rorug05G0301100 Rorug05G0427000 Rorug05G0451700 Rorug05G0462300 Rorug05G0467300 Rorug05G0524100 Rorug05G0527400 Rorug05G0527500 Rorug05G0561800 Rorug05G0567700 Rorug05G0574200 Rorug06G0000900 Rorug06G0018700.1 Rorug06G0025100 Rorug06G0025200 Rorug06G0025500 Rorug06G0041300 Rorug06G0048100 Rorug06G0050800 Rorug06G0053900 Rorug06G0075200 Rorug06G0080600 Rorug06G0087500.1 Rorug06G0090000 Rorug06G0141200 Rorug06G0218300 Rorug07G0106700 Rorug07G0125500 Rorug07G0185500 Rorug07G0194000 Rorug07G0196600 Rorug07G0200600 Rorug07G0217300 Rorug07G0250300 Rorug07G0301900 Rorug07G0309100.1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	287
AccII	CGCG	1 cut(s)	37
AciI	CCGC	4 cut(s)	32, 35, 174, 998
AclWI	GGATC	1 cut(s)	746
AcoI	YGGCCR	2 cut(s)	277, 474
AcsI	RAATTY	4 cut(s)	22, 425, 503, 847
AcuI	CTGAAG	1 cut(s)	702
AdeI	CACNNNGTG	1 cut(s)	574
AfiI	CCNNNNNNNGG	2 cut(s)	41, 154
AgsI	TTSAA	1 cut(s)	317
AhdI	GACNNNNNGTC	2 cut(s)	44, 244
AjnI	CCWGG	2 cut(s)	133, 763
AleI	CACNNNNGTG	1 cut(s)	953
AluBI	AGCT	5 cut(s)	10, 166, 449, 621, 680
AluI	AGCT	5 cut(s)	10, 166, 449, 621, 680
Alw21I	GWGCWC	3 cut(s)	72, 168, 772
Alw26I	GTCTC	3 cut(s)	46, 163, 212
AlwI	GGATC	1 cut(s)	746
AlwNI	CAGNNNCTG	1 cut(s)	680
AoxI	GGCC	8 cut(s)	194, 277, 297, 304, 474, 480, 533, 936
ApeKI	GCWGC	3 cut(s)	443, 446, 1049
ApoI	RAATTY	4 cut(s)	22, 425, 503, 847
AspLEI	GCGC	2 cut(s)	80, 544
AspS9I	GGNCC	3 cut(s)	194, 533, 631
AsuC2I	CCSGG	2 cut(s)	103, 532
AsuHPI	GGTGA	6 cut(s)	586, 832, 839, 896, 967, 975
AvaII	GGWCC	1 cut(s)	631
AxyI	CCTNAGG	2 cut(s)	301, 940
BalI	TGGCCA	2 cut(s)	279, 476
BanII	GRGCYC	1 cut(s)	168
BbsI	GAAGAC	2 cut(s)	240, 669
Bbv12I	GWGCWC	3 cut(s)	72, 168, 772
BbvCI	CCTCAGC	1 cut(s)	450
BbvI	GCAGC	3 cut(s)	430, 458, 1061
BccI	CCATC	4 cut(s)	157, 713, 952, 962
BceAI	ACGGC	1 cut(s)	181
BcgI	CGANNNNNNTGC	2 cut(s)	328, 362
BciT130I	CCWGG	2 cut(s)	135, 765
BclI	TGATCA	1 cut(s)	901
BcnI	CCSGG	2 cut(s)	103, 532
BcoDI	GTCTC	3 cut(s)	46, 163, 212
BfaI	CTAG	3 cut(s)	671, 707, 740
BfmI	CTRYAG	1 cut(s)	444
BisI	GCNGC	5 cut(s)	35, 444, 447, 999, 1050
BlsI	GCNGC	5 cut(s)	36, 445, 448, 1000, 1051
Bme1390I	CCNGG	4 cut(s)	103, 135, 532, 765
Bme18I	GGWCC	1 cut(s)	631
BmeRI	GACNNNNNGTC	2 cut(s)	44, 244
BmgT120I	GGNCC	3 cut(s)	194, 533, 631
BmiI	GGNNCC	1 cut(s)	139
BmrFI	CCNGG	4 cut(s)	103, 135, 532, 765
BmrI	ACTGGG	2 cut(s)	252, 708
BmsI	GCATC	2 cut(s)	646, 981
BmuI	ACTGGG	2 cut(s)	252, 708
BpiI	GAAGAC	2 cut(s)	240, 669
BpmI	CTGGAG	2 cut(s)	70, 753
Bpu10I	CCTNAGC	1 cut(s)	450
BpuEI	CTTGAG	2 cut(s)	756, 776
BpuMI	CCSGG	2 cut(s)	103, 532
BsaI	GGTCTC	1 cut(s)	163
BsaJI	CCNNGG	2 cut(s)	471, 477
BsaWI	WCCGGW	1 cut(s)	154
BsaXI	ACNNNNNCTCC	2 cut(s)	539, 569
Bsc4I	CCNNNNNNNGG	2 cut(s)	41, 154
Bse1I	ACTGG	5 cut(s)	247, 280, 387, 568, 703
Bse21I	CCTNAGG	2 cut(s)	301, 940
Bse3DI	GCAATG	3 cut(s)	222, 639, 1035
BseBI	CCWGG	2 cut(s)	135, 765
BseDI	CCNNGG	2 cut(s)	471, 477
BseGI	GGATG	1 cut(s)	10
BseLI	CCNNNNNNNGG	2 cut(s)	41, 154
BseMI	GCAATG	3 cut(s)	222, 639, 1035
BseMII	CTCAG	4 cut(s)	108, 315, 441, 954
BseNI	ACTGG	5 cut(s)	247, 280, 387, 568, 703
BseXI	GCAGC	3 cut(s)	430, 458, 1061
Bsh1236I	CGCG	1 cut(s)	37
BshFI	GGCC	8 cut(s)	196, 279, 299, 306, 476, 482, 535, 938
BsiHKAI	GWGCWC	3 cut(s)	72, 168, 772
BsiSI	CCGG	3 cut(s)	103, 155, 531
BslFI	GGGAC	1 cut(s)	373
BslI	CCNNNNNNNGG	2 cut(s)	41, 154
BsmAI	GTCTC	3 cut(s)	46, 163, 212
BsmFI	GGGAC	1 cut(s)	373
BsnI	GGCC	8 cut(s)	196, 279, 299, 306, 476, 482, 535, 938
Bso31I	GGTCTC	1 cut(s)	163
Bsp1286I	GDGCHC	3 cut(s)	72, 168, 772
Bsp143I	GATC	3 cut(s)	107, 751, 901
BspACI	CCGC	4 cut(s)	32, 35, 174, 998
BspANI	GGCC	8 cut(s)	196, 279, 299, 306, 476, 482, 535, 938
BspCNI	CTCAG	4 cut(s)	107, 314, 442, 953
BspFNI	CGCG	1 cut(s)	37
BspHI	TCATGA	1 cut(s)	402
BspLI	GGNNCC	1 cut(s)	139
BspMAI	CTGCAG	1 cut(s)	448
BspPI	GGATC	1 cut(s)	746
BspTNI	GGTCTC	1 cut(s)	163
BsrDI	GCAATG	3 cut(s)	222, 639, 1035
BsrI	ACTGG	5 cut(s)	247, 280, 387, 568, 703
BssECI	CCNNGG	2 cut(s)	471, 477
BssMI	GATC	3 cut(s)	107, 751, 901
BssT1I	CCWWGG	2 cut(s)	471, 477
Bst2UI	CCWGG	2 cut(s)	135, 765
Bst4CI	ACNGT	3 cut(s)	461, 880, 952
Bst6I	CTCTTC	2 cut(s)	513, 1064
BstAPI	GCANNNNNTGC	1 cut(s)	1022
BstC8I	GCNNGC	4 cut(s)	308, 690, 936, 1027
BstDEI	CTNAG	4 cut(s)	94, 301, 450, 940
BstF5I	GGATG	1 cut(s)	10
BstFNI	CGCG	1 cut(s)	37
BstHHI	GCGC	2 cut(s)	80, 544
BstKTI	GATC	3 cut(s)	110, 754, 904
BstMAI	GTCTC	3 cut(s)	46, 163, 212
BstMBI	GATC	3 cut(s)	107, 751, 901
BstMWI	GCNNNNNNNGC	4 cut(s)	541, 995, 1022, 1046
BstNI	CCWGG	2 cut(s)	135, 765
BstSCI	CCNGG	4 cut(s)	101, 133, 530, 763
BstSFI	CTRYAG	1 cut(s)	444
BstUI	CGCG	1 cut(s)	37
BstV1I	GCAGC	3 cut(s)	430, 458, 1061
BstV2I	GAAGAC	2 cut(s)	240, 669
Bsu36I	CCTNAGG	2 cut(s)	301, 940
BsuRI	GGCC	8 cut(s)	196, 279, 299, 306, 476, 482, 535, 938
BtsCI	GGATG	1 cut(s)	10
BtsIMutI	CAGTG	5 cut(s)	240, 380, 466, 755, 948
Cac8I	GCNNGC	4 cut(s)	308, 690, 936, 1027
CaiI	CAGNNNCTG	1 cut(s)	680
CciI	TCATGA	1 cut(s)	402
CfoI	GCGC	2 cut(s)	80, 544
Cfr13I	GGNCC	3 cut(s)	194, 533, 631
CsiI	ACCWGGT	1 cut(s)	763
CviAII	CATG	2 cut(s)	403, 545
DdeI	CTNAG	4 cut(s)	94, 301, 450, 940
DpnI	GATC	3 cut(s)	109, 753, 903
DpnII	GATC	3 cut(s)	107, 751, 901
DraIII	CACNNNGTG	1 cut(s)	574
DriI	GACNNNNNGTC	2 cut(s)	44, 244
EaeI	YGGCCR	2 cut(s)	277, 474
Eam1104I	CTCTTC	2 cut(s)	513, 1064
Eam1105I	GACNNNNNGTC	2 cut(s)	44, 244
EarI	CTCTTC	2 cut(s)	513, 1064
Ecl136II	GAGCTC	1 cut(s)	166
Eco130I	CCWWGG	2 cut(s)	471, 477
Eco147I	AGGCCT	2 cut(s)	306, 938
Eco24I	GRGCYC	1 cut(s)	168
Eco31I	GGTCTC	1 cut(s)	163
Eco47I	GGWCC	1 cut(s)	631
Eco53kI	GAGCTC	1 cut(s)	166
Eco57I	CTGAAG	1 cut(s)	702
Eco81I	CCTNAGG	2 cut(s)	301, 940
EcoICRI	GAGCTC	1 cut(s)	166
EcoRI	GAATTC	1 cut(s)	425
EcoRII	CCWGG	2 cut(s)	133, 763
EcoT14I	CCWWGG	2 cut(s)	471, 477
EcoT38I	GRGCYC	1 cut(s)	168
ErhI	CCWWGG	2 cut(s)	471, 477
FaeI	CATG	2 cut(s)	406, 548
FaqI	GGGAC	1 cut(s)	373
FatI	CATG	2 cut(s)	402, 544
FbaI	TGATCA	1 cut(s)	901
FblI	GTMKAC	1 cut(s)	287
Fnu4HI	GCNGC	5 cut(s)	35, 444, 447, 999, 1050
FokI	GGATG	1 cut(s)	17
FriOI	GRGCYC	1 cut(s)	168
Fsp4HI	GCNGC	5 cut(s)	35, 444, 447, 999, 1050
FspBI	CTAG	3 cut(s)	671, 707, 740
GlaI	GCGC	2 cut(s)	79, 543
GluI	GCNGC	5 cut(s)	35, 444, 447, 999, 1050
GsuI	CTGGAG	2 cut(s)	70, 753
HaeIII	GGCC	8 cut(s)	196, 279, 299, 306, 476, 482, 535, 938
HapII	CCGG	3 cut(s)	103, 155, 531
HhaI	GCGC	2 cut(s)	80, 544
Hin1II	CATG	2 cut(s)	406, 548
Hin6I	GCGC	2 cut(s)	78, 542
HinP1I	GCGC	2 cut(s)	78, 542
HincII	GTYRAC	2 cut(s)	391, 457
HindII	GTYRAC	2 cut(s)	391, 457
HinfI	GANTC	8 cut(s)	45, 60, 92, 361, 399, 523, 703, 980
HpaI	GTTAAC	2 cut(s)	391, 457
HpaII	CCGG	3 cut(s)	103, 155, 531
HphI	GGTGA	6 cut(s)	586, 832, 839, 896, 967, 975
Hpy166II	GTNNAC	6 cut(s)	288, 334, 391, 457, 464, 631
Hpy188I	TCNGA	4 cut(s)	91, 163, 509, 751
Hpy188III	TCNNGA	6 cut(s)	49, 236, 264, 403, 422, 773
Hpy8I	GTNNAC	6 cut(s)	288, 334, 391, 457, 464, 631
HpyAV	CCTTC	3 cut(s)	571, 677, 919
HpyCH4III	ACNGT	3 cut(s)	461, 880, 952
HpyF10VI	GCNNNNNNNGC	4 cut(s)	541, 995, 1022, 1046
HpyF3I	CTNAG	4 cut(s)	94, 301, 450, 940
Hsp92II	CATG	2 cut(s)	406, 548
HspAI	GCGC	2 cut(s)	78, 542
Ksp22I	TGATCA	1 cut(s)	901
KspAI	GTTAAC	2 cut(s)	391, 457
Kzo9I	GATC	3 cut(s)	107, 751, 901
LmnI	GCTCC	2 cut(s)	67, 171
Lsp1109I	GCAGC	3 cut(s)	430, 458, 1061
LweI	GCATC	2 cut(s)	646, 981
MabI	ACCWGGT	1 cut(s)	763
MaeI	CTAG	3 cut(s)	671, 707, 740
MaeIII	GTNAC	3 cut(s)	566, 820, 827
MalI	GATC	3 cut(s)	109, 753, 903
MboI	GATC	3 cut(s)	107, 751, 901
MboII	GAAGA	5 cut(s)	240, 524, 530, 674, 1081
MfeI	CAATTG	4 cut(s)	369, 832, 1017, 1041
MhlI	GDGCHC	3 cut(s)	72, 168, 772
MlsI	TGGCCA	2 cut(s)	279, 476
MluNI	TGGCCA	2 cut(s)	279, 476
MlyI	GAGTC	6 cut(s)	54, 54, 86, 355, 393, 974
MmeI	TCCRAC	1 cut(s)	114
MnlI	CCTC	8 cut(s)	68, 268, 310, 445, 565, 949, 1039, 1092
Mox20I	TGGCCA	2 cut(s)	279, 476
MscI	TGGCCA	2 cut(s)	279, 476
MseI	TTAA	2 cut(s)	390, 456
MslI	CAYNNNNRTG	2 cut(s)	818, 953
Msp20I	TGGCCA	2 cut(s)	279, 476
MspA1I	CMGCKG	1 cut(s)	449
MspI	CCGG	3 cut(s)	103, 155, 531
MspR9I	CCNGG	4 cut(s)	103, 135, 532, 765
MunI	CAATTG	4 cut(s)	369, 832, 1017, 1041
MvaI	CCWGG	2 cut(s)	135, 765
MvnI	CGCG	1 cut(s)	37
MwoI	GCNNNNNNNGC	4 cut(s)	541, 995, 1022, 1046
NciI	CCSGG	2 cut(s)	103, 532
NdeII	GATC	3 cut(s)	107, 751, 901
NlaIII	CATG	2 cut(s)	406, 548
NlaIV	GGNNCC	1 cut(s)	139
NmuCI	GTSAC	3 cut(s)	566, 820, 827
OliI	CACNNNNGTG	1 cut(s)	953
PagI	TCATGA	1 cut(s)	402
PceI	AGGCCT	2 cut(s)	306, 938
PfeI	GAWTC	2 cut(s)	523, 703
PkrI	GCNGC	5 cut(s)	36, 445, 448, 1000, 1051
PleI	GAGTC	6 cut(s)	53, 54, 86, 355, 393, 974
PpsI	GAGTC	6 cut(s)	53, 54, 86, 355, 393, 974
Psp124BI	GAGCTC	1 cut(s)	168
Psp6I	CCWGG	2 cut(s)	133, 763
PspGI	CCWGG	2 cut(s)	133, 763
PspN4I	GGNNCC	1 cut(s)	139
PspPI	GGNCC	3 cut(s)	194, 533, 631
PstI	CTGCAG	1 cut(s)	448
PstNI	CAGNNNCTG	1 cut(s)	680
PvuII	CAGCTG	1 cut(s)	449
RseI	CAYNNNNRTG	2 cut(s)	818, 953
SacI	GAGCTC	1 cut(s)	168
SaqAI	TTAA	2 cut(s)	390, 456
SatI	GCNGC	5 cut(s)	35, 444, 447, 999, 1050
Sau3AI	GATC	3 cut(s)	107, 751, 901
Sau96I	GGNCC	3 cut(s)	194, 533, 631
SchI	GAGTC	6 cut(s)	54, 54, 86, 355, 393, 974
ScrFI	CCNGG	4 cut(s)	103, 135, 532, 765
SduI	GDGCHC	3 cut(s)	72, 168, 772
SexAI	ACCWGGT	1 cut(s)	763
SfaNI	GCATC	2 cut(s)	646, 981
SfcI	CTRYAG	1 cut(s)	444
SinI	GGWCC	1 cut(s)	631
SmiMI	CAYNNNNRTG	2 cut(s)	818, 953
SmlI	CTYRAG	2 cut(s)	771, 791
SmoI	CTYRAG	2 cut(s)	771, 791
SseBI	AGGCCT	2 cut(s)	306, 938
SsiI	CCGC	4 cut(s)	32, 35, 174, 998
SspMI	CTAG	3 cut(s)	671, 707, 740
SstI	GAGCTC	1 cut(s)	168
StuI	AGGCCT	2 cut(s)	306, 938
StyD4I	CCNGG	4 cut(s)	101, 133, 530, 763
StyI	CCWWGG	2 cut(s)	471, 477
TaaI	ACNGT	3 cut(s)	461, 880, 952
TaqI	TCGA	3 cut(s)	348, 421, 654
TauI	GCSGC	2 cut(s)	37, 1001
TfiI	GAWTC	2 cut(s)	523, 703
Tru1I	TTAA	2 cut(s)	390, 456
Tru9I	TTAA	2 cut(s)	390, 456
TscAI	CASTG	5 cut(s)	247, 387, 466, 762, 955
TseFI	GTSAC	3 cut(s)	566, 820, 827
TseI	GCWGC	3 cut(s)	443, 446, 1049
Tsp45I	GTSAC	3 cut(s)	566, 820, 827
TspDTI	ATGAA	7 cut(s)	35, 419, 447, 531, 815, 876, 1082
TspRI	CASTG	5 cut(s)	247, 387, 466, 762, 955
VpaK11BI	GGWCC	1 cut(s)	631
XapI	RAATTY	4 cut(s)	22, 425, 503, 847
XmiI	GTMKAC	1 cut(s)	287
XspI	CTAG	3 cut(s)	671, 707, 740

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.