Rorug05G0109400

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000062
Physical Location & Seq
Reverse (-)
9738644 .. 9746133
7490 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0109400.1

Sequence Viewer

Length: 1356 bp
ATGGAGGTGGAGGAGATTCAAGCTCAGCAGCCCTGCAAGTTCCCAAGAATTGGAAATGGCGGTAGAGGAAGCACTATAGCCAAGAACCCAGATGAGGAAGACGACGGTGGCGGCGGCCGGGGCCGGGAGCTCAAGAGAGCTGGCGGGGGAGACGCCGGCACTAACCGGCTTAACGGGTGGCACCACTCTCGAATCATCAGGGTTTCGAGAGCCTCCGGAGGCAAAGATCGGCACAGCAAGGTGTGGACTTCGAAAGGGTTGAGGGACAGGAGGGTCCGGTTGTCGGTTACAACCGCTATTCAATTCTACGATCTTCAAGATCGGCTGGGTTATGACCAACCCAGTAAGGCAGTGGAGTGGCTGATCAAAGCTGCCGCTGACGCCATCTCCGAGCTTCCTTCTCTGAACAGCTCGTTCCCCGACACTCCGAAGCAGCTCAGCGATGAGAAGAGGGCGAGCAGCGAGCGGGGGTTCGATTCTGTTGAGCTTGATGTTGATGGTGACCCCAATTATCACCATCAAGTGCAGAATCATCATCAGCTTTGTATGTCGAAATCTGCTTGCAGTAGTACTTCTGAGACGAGCAAGGGATCGGGGCTGTCTCTGTCCCGGTCGGAGATGCGGGTGAACCGGGATAAGGCCAGGGAGCGAGCCCGGGAGAGAGCAGCCAAGGACAAGGAGAAAGACGGCAACAACGACGAGTCCTCCCGCATTGCACAGGCTATTTCTCAAAACGCATCCTTTACTGAGCTTCTCACCGGCGGAATCGGAAACAACAGGAACAACAGTCCCACCGGTCATCAGCAGAACAACAACAACGGCGAGCCCATTTTGTTCCACAAGGCAGCACCACCGATGGACTACTTCGGGTCGAGTCTTCTGGGACTTTCCTCCACCCCAACCCGAAACCACCATCAATTCTCCGGCCAAATCCACCTGGGGAATTCGCTCCCGCAGACAATGTTCAGCATCTCCGGTGACCACAACAACAGCCACCCGGAGATGCAGCATTTCTCGTTTGTTCCCGACTACATCCCTGTCTCGGCAGCAGCGGCCAACGGCGGCGAATACAACCTCAACTTCTCCATGTCTTCTTCCGGCGGCCTTGCTGGTTTCAATAGGGGGACCCTTCAGTCCAATTCATCATCATCACCACCTTCTCTTTTGCCTCACCTCCAGAGGTTCTCTCCCATGGACGGATCGTCCAGTGTACCTTTCTTCATCGGAGCTGCCGCCGCAGCCGCAGCCGCAGCTCCAACCATGGAGAATCACCAGCACCACCAGTTCCCAGCTGGATTGCAGCTCTACGGCGACGGAAGCCGGCATTCAGACCACAAGGGAAAAGCAAAGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

451

Amino Acids

48.8

Weight (kDa)

8.35

Isoelectric Point (pI)

47.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TCP PF03634 73 - 227 2.9e-43 TCP family transcription factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 272, 1132
AccB1I GGYRCC 1 cut(s) 180
AccB7I CCANNNNNTGG 1 cut(s) 50
AccBSI CCGCTC 1 cut(s) 466
AccIII TCCGGA 1 cut(s) 215
AclWI GGATC 2 cut(s) 598, 1207
AcoI YGGCCR 3 cut(s) 115, 925, 1053
AcsI RAATTY 1 cut(s) 943
AcuI CTGAAG 1 cut(s) 1115
AcyI GRCGYC 2 cut(s) 153, 381
AfaI GTAC 2 cut(s) 571, 1212
AfiI CCNNNNNNNGG 7 cut(s) 50, 94, 124, 283, 637, 1042, 1196
AgeI ACCGGT 1 cut(s) 794
AgsI TTSAA 4 cut(s) 20, 302, 317, 1117
AhdI GACNNNNNGTC 1 cut(s) 1201
AjnI CCWGG 2 cut(s) 641, 936
Alw21I GWGCWC 1 cut(s) 132
Alw26I GTCTC 4 cut(s) 144, 572, 606, 1045
AlwI GGATC 2 cut(s) 598, 1207
Ama87I CYCGRG 1 cut(s) 654
Aor13HI TCCGGA 1 cut(s) 215
AoxI GGCC 6 cut(s) 115, 121, 639, 925, 1053, 1102
ApoI RAATTY 1 cut(s) 943
AsiGI ACCGGT 1 cut(s) 794
AspS9I GGNCC 3 cut(s) 121, 274, 1125
AsuC2I CCSGG 7 cut(s) 119, 125, 610, 632, 655, 656, 998
AsuHPI GGTGA 8 cut(s) 506, 512, 637, 748, 989, 1143, 1163, 1262
AsuII TTCGAA 1 cut(s) 251
AvaI CYCGRG 1 cut(s) 654
AvaII GGWCC 2 cut(s) 274, 1125
BanI GGYRCC 1 cut(s) 180
BanII GRGCYC 3 cut(s) 132, 655, 828
BbsI GAAGAC 3 cut(s) 105, 869, 1083
Bbv12I GWGCWC 1 cut(s) 132
BccI CCATC 5 cut(s) 392, 491, 525, 850, 921
BceAI ACGGC 4 cut(s) 703, 835, 1075, 1324
BcgI CGANNNNNNTGC 2 cut(s) 170, 204
BciT130I CCWGG 2 cut(s) 643, 938
BclI TGATCA 1 cut(s) 363
BcnI CCSGG 7 cut(s) 119, 125, 610, 632, 655, 656, 998
BcoDI GTCTC 4 cut(s) 144, 572, 606, 1045
BfmI CTRYAG 1 cut(s) 75
BlpI GCTNAGC 2 cut(s) 24, 437
BmcAI AGTACT 1 cut(s) 571
Bme1390I CCNGG 9 cut(s) 119, 125, 610, 632, 643, 655, 656, 938, 998
Bme18I GGWCC 2 cut(s) 274, 1125
BmeRI GACNNNNNGTC 1 cut(s) 1201
BmeT110I CYCGRG 1 cut(s) 654
BmgT120I GGNCC 3 cut(s) 121, 274, 1125
BmiI GGNNCC 5 cut(s) 122, 182, 275, 1126, 1127
BmrFI CCNGG 9 cut(s) 119, 125, 610, 632, 643, 655, 656, 938, 998
BmrI ACTGGG 1 cut(s) 336
BmsI GCATC 4 cut(s) 609, 746, 978, 993
BmuI ACTGGG 1 cut(s) 336
BpiI GAAGAC 3 cut(s) 105, 869, 1083
BplI GAGNNNNNCTC 2 cut(s) 1171, 1203
BpmI CTGGAG 1 cut(s) 1160
Bpu1102I GCTNAGC 2 cut(s) 24, 437
Bpu14I TTCGAA 1 cut(s) 251
BpuEI CTTGAG 1 cut(s) 116
BpuMI CCSGG 7 cut(s) 119, 125, 610, 632, 655, 656, 998
BsaHI GRCGYC 2 cut(s) 153, 381
BsaJI CCNNGG 7 cut(s) 118, 642, 654, 669, 937, 1191, 1260
BsaWI WCCGGW 4 cut(s) 215, 276, 794, 974
BsaXI ACNNNNNCTCC 4 cut(s) 371, 401, 689, 719
Bsc4I CCNNNNNNNGG 7 cut(s) 50, 94, 124, 283, 637, 1042, 1196
Bse118I RCCGGY 5 cut(s) 155, 165, 758, 794, 1320
Bse1I ACTGG 3 cut(s) 342, 1206, 1282
Bse3DI GCAATG 1 cut(s) 711
BseAI TCCGGA 1 cut(s) 215
BseBI CCWGG 2 cut(s) 643, 938
BseDI CCNNGG 7 cut(s) 118, 642, 654, 669, 937, 1191, 1260
BseGI GGATG 2 cut(s) 737, 1032
BseLI CCNNNNNNNGG 7 cut(s) 50, 94, 124, 283, 637, 1042, 1196
BseMI GCAATG 1 cut(s) 711
BseMII CTCAG 4 cut(s) 38, 451, 567, 738
BseNI ACTGG 3 cut(s) 342, 1206, 1282
BseRI GAGGAG 1 cut(s) 26
BseX3I CGGCCG 1 cut(s) 115
BseYI CCCAGC 2 cut(s) 325, 1288
BsgI GTGCAG 1 cut(s) 545
Bsh1285I CGRYCG 2 cut(s) 118, 614
BshFI GGCC 6 cut(s) 117, 123, 641, 927, 1055, 1104
BshNI GGYRCC 1 cut(s) 180
BshTI ACCGGT 1 cut(s) 794
BsiEI CGRYCG 2 cut(s) 118, 614
BsiHKAI GWGCWC 1 cut(s) 132
BsiHKCI CYCGRG 1 cut(s) 654
BslFI GGGAC 5 cut(s) 278, 592, 774, 897, 1138
BslI CCNNNNNNNGG 7 cut(s) 50, 94, 124, 283, 637, 1042, 1196
BsmAI GTCTC 4 cut(s) 144, 572, 606, 1045
BsmBI CGTCTC 2 cut(s) 144, 572
BsmFI GGGAC 5 cut(s) 278, 592, 774, 897, 1138
BsmI GAATGC 1 cut(s) 1324
BsnI GGCC 6 cut(s) 117, 123, 641, 927, 1055, 1104
BsoBI CYCGRG 1 cut(s) 654
Bsp119I TTCGAA 1 cut(s) 251
Bsp1286I GDGCHC 3 cut(s) 132, 655, 828
Bsp13I TCCGGA 1 cut(s) 215
Bsp143I GATC 6 cut(s) 226, 310, 319, 363, 590, 1199
Bsp1720I GCTNAGC 2 cut(s) 24, 437
Bsp19I CCATGG 2 cut(s) 1191, 1260
BspANI GGCC 6 cut(s) 117, 123, 641, 927, 1055, 1104
BspCNI CTCAG 4 cut(s) 37, 450, 568, 739
BspEI TCCGGA 1 cut(s) 215
BspLI GGNNCC 5 cut(s) 122, 182, 275, 1126, 1127
BspPI GGATC 2 cut(s) 598, 1207
BspT104I TTCGAA 1 cut(s) 251
BspT107I GGYRCC 1 cut(s) 180
BsrBI CCGCTC 1 cut(s) 466
BsrDI GCAATG 1 cut(s) 711
BsrFI RCCGGY 5 cut(s) 155, 165, 758, 794, 1320
BsrI ACTGG 3 cut(s) 342, 1206, 1282
BssAI RCCGGY 5 cut(s) 155, 165, 758, 794, 1320
BssECI CCNNGG 7 cut(s) 118, 642, 654, 669, 937, 1191, 1260
BssMI GATC 6 cut(s) 226, 310, 319, 363, 590, 1199
BssNI GRCGYC 2 cut(s) 153, 381
BssT1I CCWWGG 3 cut(s) 669, 1191, 1260
Bst2UI CCWGG 2 cut(s) 643, 938
Bst4CI ACNGT 2 cut(s) 107, 788
Bst6I CTCTTC 1 cut(s) 443
BstACI GRCGYC 2 cut(s) 153, 381
BstBI TTCGAA 1 cut(s) 251
BstC8I GCNNGC 8 cut(s) 142, 157, 457, 464, 562, 651, 824, 1322
BstDEI CTNAG 4 cut(s) 24, 437, 576, 747
BstDSI CCRYGG 2 cut(s) 1191, 1260
BstEII GGTNACC 2 cut(s) 500, 977
BstF5I GGATG 2 cut(s) 737, 1032
BstKTI GATC 6 cut(s) 229, 313, 322, 366, 593, 1202
BstMAI GTCTC 4 cut(s) 144, 572, 606, 1045
BstMBI GATC 6 cut(s) 226, 310, 319, 363, 590, 1199
BstMCI CGRYCG 2 cut(s) 118, 614
BstNI CCWGG 2 cut(s) 643, 938
BstPI GGTNACC 2 cut(s) 500, 977
BstSCI CCNGG 9 cut(s) 117, 123, 608, 630, 641, 653, 654, 936, 996
BstSFI CTRYAG 1 cut(s) 75
BstV2I GAAGAC 3 cut(s) 105, 869, 1083
BstZI CGGCCG 1 cut(s) 115
BsuRI GGCC 6 cut(s) 117, 123, 641, 927, 1055, 1104
BtgI CCRYGG 2 cut(s) 1191, 1260
BtgZI GCGATG 1 cut(s) 456
BtsCI GGATG 2 cut(s) 737, 1032
BtsI GCAGTG 1 cut(s) 357
BtsIMutI CAGTG 2 cut(s) 357, 1213
Cac8I GCNNGC 8 cut(s) 142, 157, 457, 464, 562, 651, 824, 1322
Cfr10I RCCGGY 5 cut(s) 155, 165, 758, 794, 1320
Cfr13I GGNCC 3 cut(s) 121, 274, 1125
Cfr9I CCCGGG 1 cut(s) 654
CseI GACGC 2 cut(s) 161, 389
Csp6I GTAC 2 cut(s) 570, 1211
CspAI ACCGGT 1 cut(s) 794
CviAII CATG 3 cut(s) 1087, 1192, 1261
CviQI GTAC 2 cut(s) 570, 1211
DdeI CTNAG 4 cut(s) 24, 437, 576, 747
DpnI GATC 6 cut(s) 228, 312, 321, 365, 592, 1201
DpnII GATC 6 cut(s) 226, 310, 319, 363, 590, 1199
DrdI GACNNNNNNGTC 2 cut(s) 272, 1132
DriI GACNNNNNGTC 1 cut(s) 1201
DseDI GACNNNNNNGTC 2 cut(s) 272, 1132
EaeI YGGCCR 3 cut(s) 115, 925, 1053
EagI CGGCCG 1 cut(s) 115
Eam1104I CTCTTC 1 cut(s) 443
Eam1105I GACNNNNNGTC 1 cut(s) 1201
EarI CTCTTC 1 cut(s) 443
EciI GGCGGA 1 cut(s) 777
Ecl136II GAGCTC 1 cut(s) 130
EclXI CGGCCG 1 cut(s) 115
Eco130I CCWWGG 3 cut(s) 669, 1191, 1260
Eco24I GRGCYC 3 cut(s) 132, 655, 828
Eco47I GGWCC 2 cut(s) 274, 1125
Eco52I CGGCCG 1 cut(s) 115
Eco53kI GAGCTC 1 cut(s) 130
Eco57I CTGAAG 1 cut(s) 1115
Eco88I CYCGRG 1 cut(s) 654
Eco91I GGTNACC 2 cut(s) 500, 977
EcoICRI GAGCTC 1 cut(s) 130
EcoO109I RGGNCCY 1 cut(s) 1125
EcoO65I GGTNACC 2 cut(s) 500, 977
EcoRI GAATTC 1 cut(s) 943
EcoRII CCWGG 2 cut(s) 641, 936
EcoT14I CCWWGG 3 cut(s) 669, 1191, 1260
EcoT38I GRGCYC 3 cut(s) 132, 655, 828
ErhI CCWWGG 3 cut(s) 669, 1191, 1260
Esp3I CGTCTC 2 cut(s) 144, 572
FaeI CATG 3 cut(s) 1090, 1195, 1264
FaiI YATR 6 cut(s) 77, 333, 548, 1088, 1193, 1262
FaqI GGGAC 5 cut(s) 278, 592, 774, 897, 1138
FatI CATG 3 cut(s) 1086, 1191, 1260
FauI CCCGC 5 cut(s) 137, 459, 615, 716, 960
FbaI TGATCA 1 cut(s) 363
FokI GGATG 2 cut(s) 724, 1019
FriOI GRGCYC 3 cut(s) 132, 655, 828
GsaI CCCAGC 2 cut(s) 329, 1292
GsuI CTGGAG 1 cut(s) 1160
HaeIII GGCC 6 cut(s) 117, 123, 641, 927, 1055, 1104
HgaI GACGC 2 cut(s) 161, 389
Hin1I GRCGYC 2 cut(s) 153, 381
Hin1II CATG 3 cut(s) 1090, 1195, 1264
HinfI GANTC 8 cut(s) 16, 192, 476, 529, 701, 765, 874, 1267
HphI GGTGA 8 cut(s) 506, 512, 637, 748, 989, 1143, 1163, 1262
Hpy166II GTNNAC 3 cut(s) 246, 628, 1211
Hpy188I TCNGA 8 cut(s) 391, 405, 429, 577, 616, 770, 1226, 1330
Hpy188III TCNNGA 7 cut(s) 133, 189, 207, 216, 317, 1025, 1177
Hpy8I GTNNAC 3 cut(s) 246, 628, 1211
Hpy99I CGWCG 3 cut(s) 107, 701, 1316
HpyAV CCTTC 3 cut(s) 408, 1139, 1167
HpyCH4III ACNGT 2 cut(s) 107, 788
HpyCH4V TGCA 6 cut(s) 36, 526, 564, 716, 1006, 1300
HpyF3I CTNAG 4 cut(s) 24, 437, 576, 747
Hsp92I GRCGYC 2 cut(s) 153, 381
Hsp92II CATG 3 cut(s) 1090, 1195, 1264
KflI GGGWCCC 1 cut(s) 1125
Kpn2I TCCGGA 1 cut(s) 215
KroI GCCGGC 2 cut(s) 155, 1320
KroNI GCCGGC 2 cut(s) 157, 1322
Ksp22I TGATCA 1 cut(s) 363
Kzo9I GATC 6 cut(s) 226, 310, 319, 363, 590, 1199
LmnI GCTCC 5 cut(s) 127, 646, 954, 1226, 1258
LweI GCATC 4 cut(s) 609, 746, 978, 993
MaeIII GTNAC 3 cut(s) 286, 500, 977
MalI GATC 6 cut(s) 228, 312, 321, 365, 592, 1201
MbiI CCGCTC 1 cut(s) 466
MboI GATC 6 cut(s) 226, 310, 319, 363, 590, 1199
MboII GAAGA 7 cut(s) 110, 305, 460, 869, 1083, 1086, 1210
MhlI GDGCHC 3 cut(s) 132, 655, 828
MluCI AATT 6 cut(s) 48, 302, 508, 917, 943, 1138
MlyI GAGTC 2 cut(s) 710, 883
MmeI TCCRAC 2 cut(s) 594, 1280
MroI TCCGGA 1 cut(s) 215
MroNI GCCGGC 2 cut(s) 155, 1320
MseI TTAA 1 cut(s) 171
MspA1I CMGCKG 3 cut(s) 377, 1052, 1292
MspR9I CCNGG 9 cut(s) 119, 125, 610, 632, 643, 655, 656, 938, 998
Mva1269I GAATGC 1 cut(s) 1324
MvaI CCWGG 2 cut(s) 643, 938
NaeI GCCGGC 2 cut(s) 157, 1322
NciI CCSGG 7 cut(s) 119, 125, 610, 632, 655, 656, 998
NcoI CCATGG 2 cut(s) 1191, 1260
NdeII GATC 6 cut(s) 226, 310, 319, 363, 590, 1199
NgoMIV GCCGGC 2 cut(s) 155, 1320
NlaIII CATG 3 cut(s) 1090, 1195, 1264
NlaIV GGNNCC 5 cut(s) 122, 182, 275, 1126, 1127
NmeAIII GCCGAG 1 cut(s) 1022
NmuCI GTSAC 2 cut(s) 500, 977
NspV TTCGAA 1 cut(s) 251
PcsI WCGNNNNNNNCGW 2 cut(s) 387, 693
PctI GAATGC 1 cut(s) 1324
PdiI GCCGGC 2 cut(s) 157, 1322
PfeI GAWTC 6 cut(s) 16, 192, 476, 529, 765, 1267
PflMI CCANNNNNTGG 1 cut(s) 50
PinAI ACCGGT 1 cut(s) 794
PleI GAGTC 2 cut(s) 709, 882
PpsI GAGTC 2 cut(s) 709, 882
PpuMI RGGWCCY 1 cut(s) 1125
Psp124BI GAGCTC 1 cut(s) 132
Psp5II RGGWCCY 1 cut(s) 1125
Psp6I CCWGG 2 cut(s) 641, 936
PspEI GGTNACC 2 cut(s) 500, 977
PspFI CCCAGC 2 cut(s) 325, 1288
PspGI CCWGG 2 cut(s) 641, 936
PspN4I GGNNCC 5 cut(s) 122, 182, 275, 1126, 1127
PspPI GGNCC 3 cut(s) 121, 274, 1125
PspPPI RGGWCCY 1 cut(s) 1125
PvuII CAGCTG 1 cut(s) 1292
RsaI GTAC 2 cut(s) 571, 1212
RsaNI GTAC 2 cut(s) 570, 1211
SacI GAGCTC 1 cut(s) 132
SaqAI TTAA 1 cut(s) 171
Sau3AI GATC 6 cut(s) 226, 310, 319, 363, 590, 1199
Sau96I GGNCC 3 cut(s) 121, 274, 1125
ScaI AGTACT 1 cut(s) 571
SchI GAGTC 2 cut(s) 710, 883
ScrFI CCNGG 9 cut(s) 119, 125, 610, 632, 643, 655, 656, 938, 998
SduI GDGCHC 3 cut(s) 132, 655, 828
SfaNI GCATC 4 cut(s) 609, 746, 978, 993
SfcI CTRYAG 1 cut(s) 75
SfuI TTCGAA 1 cut(s) 251
SgrAI CRCCGGYG 1 cut(s) 758
SinI GGWCC 2 cut(s) 274, 1125
SmaI CCCGGG 1 cut(s) 656
SmlI CTYRAG 1 cut(s) 131
SmoI CTYRAG 1 cut(s) 131
Sse9I AATT 6 cut(s) 48, 302, 508, 917, 943, 1138
SstI GAGCTC 1 cut(s) 132
StyD4I CCNGG 9 cut(s) 117, 123, 608, 630, 641, 653, 654, 936, 996
StyI CCWWGG 3 cut(s) 669, 1191, 1260
TaaI ACNGT 2 cut(s) 107, 788
TaqI TCGA 6 cut(s) 190, 206, 251, 474, 551, 872
TasI AATT 6 cut(s) 48, 302, 508, 917, 943, 1138
TatI WGTACW 1 cut(s) 569
TfiI GAWTC 6 cut(s) 16, 192, 476, 529, 765, 1267
Tru1I TTAA 1 cut(s) 171
Tru9I TTAA 1 cut(s) 171
TscAI CASTG 2 cut(s) 357, 1213
TseFI GTSAC 2 cut(s) 500, 977
Tsp45I GTSAC 2 cut(s) 500, 977
TspDTI ATGAA 2 cut(s) 1131, 1210
TspGWI ACGGA 2 cut(s) 1212, 1329
TspMI CCCGGG 1 cut(s) 654
TspRI CASTG 2 cut(s) 357, 1213
Van91I CCANNNNNTGG 1 cut(s) 50
VpaK11BI GGWCC 2 cut(s) 274, 1125
XapI RAATTY 1 cut(s) 943
XcmI CCANNNNNNNNNTGG 2 cut(s) 349, 1289
XmaI CCCGGG 1 cut(s) 654
ZrmI AGTACT 1 cut(s) 571
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.