FvH4_3g17130

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000062
Physical Location & Seq
Forward (+)
10846471 .. 10848879
2409 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g17130.t1

Sequence Viewer

Length: 1413 bp
ATGAATTCGAAGCCACAGAGTCAGTTGAGAGTTCGAGATAGGATCAGTGATTTACCGGATGCATTTCTTTGGCACATCCTTTCGTTTCTTGACACAACATATGTGGTGAGGACCTGTATTCTGTCTACAAGATGGAAGAACATATGGGCGTATTTTCCTACTCTAGACTTTGACCGGAGATGTTTTCATGACCCTGCTAAATTTTTAGCATTTGTTGATCATGCACTTTTCTTCCGTTACTCATCAAATATTGTAAAGTTTCGGCTTTGTTTGAGGGGTCTTGATGTGGACCAGTCTCGTATTAATGCTTGGATCAACACTGCCGTAAGGTACAGCTTTGTTGAACTTGATATCAATGCTGGGTATCCATGTCAGTTGAGGACTTATGAGTTGCCTAAAAGCCTCGTCATATGCAAAACACTGGTAACATTGAAGCTGACATCAGAATTCATTACCAGTGTTCCTGCATCAGGCTGTTTCCCGAGTCTGAAGTCCCTCCATCTTATATTCTTTTTAAATGTCAACGTATCAATGTTTGAGGTTTTGTCCAACTGCCCTGTACTTGAAGATTTTACTATGGTTGGTATCCTTCGATACAATGATTCCGTGAATTTCAACATTGCTTCCCCTGTACTGAAGACACTAAGAATATGTATTGATACTGAGGGTGATGTTTATGGATTCTCTGGTAGCTATAGCTATACTATAAATTGCCCAAAGCTTGAAACTTTTGATGTGACAGAGGAGTTTCCATCAACCTATTCTTGGGGGGAAGCAAAATCCCTAGTCAAAGCCGGAATTTGTCTACTTCAGCATTGTTCACATGATCCTAGTTTTTTCAATGTGACTGCGCTTTTAGCAGGGGTTGGTGCTCTGCCTGTTTTTGAAAACTTGAGGCGACTGAAGTTGGTTTGTCTTGAATGCTTTTGCTGGGATTTTCTTACGCACTTGCTCATAATATCACCTATCCTGGAGTCTCTTGTTTTAGAACGTAAAGTCAGCGGCATGGGTTGTGAAAAGAATTCTGATAACGACACAGGGTCAGAATATGAAAGAGACTCCACGAGTGAAGAGGCTTGTGAGCATGAAGACGGCTCAGACCATGAGAAGGGCATCGAGAGTGAAGAGGCTTCTGAGCATGAAGAGGGCATAGACCATGAGCACCAAGTGGATCCACCAGATTGTGTGCCTCAATGTTGTTTATCACACCTCAAGATTGTCTCCATATTGGGCTTTACAGGAGAACGCGATGAGTTGGAAATGGCAAAGTACTTGCTGCAGTATTGTCACGTTTTGAATAAGATGACTATTTCTATGGATGATGATCTTAGTGTGGATGAAAAAGAGAAGATGTACAAGGAGATTTTAATGGTTCCAAGGGGTTCAAGAACTAGTACAGTTGAATTTATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

471

Amino Acids

53.59

Weight (kDa)

5.03

Isoelectric Point (pI)

43.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 51 5.2e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 94 - 193 1e-05 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 102 - 220 1.6e-10 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 393 - 437 3.7e-14 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 125, 805
AccII CGCG 1 cut(s) 1248
AciI CCGC 1 cut(s) 1002
AclWI GGATC 5 cut(s) 50, 320, 821, 1166, 1179
AcsI RAATTY 7 cut(s) 4, 200, 446, 610, 798, 1021, 1403
AcuI CTGAAG 4 cut(s) 509, 656, 794, 923
AdeI CACNNNGTG 1 cut(s) 1168
AfaI GTAC 6 cut(s) 332, 561, 633, 1271, 1355, 1396
AfiI CCNNNNNNNGG 3 cut(s) 470, 765, 1108
AhdI GACNNNNNGTC 1 cut(s) 1039
AhlI ACTAGT 1 cut(s) 1391
AjnI CCWGG 1 cut(s) 969
AluBI AGCT 5 cut(s) 336, 436, 693, 699, 721
AluI AGCT 5 cut(s) 336, 436, 693, 699, 721
Alw21I GWGCWC 2 cut(s) 874, 1164
Alw26I GTCTC 4 cut(s) 300, 981, 1050, 1225
AlwI GGATC 5 cut(s) 50, 320, 821, 1166, 1179
Ama87I CYCGRG 1 cut(s) 481
ApeKI GCWGC 1 cut(s) 1276
ApoI RAATTY 7 cut(s) 4, 200, 446, 610, 798, 1021, 1403
AseI ATTAAT 1 cut(s) 303
AspLEI GCGC 1 cut(s) 853
AspS9I GGNCC 2 cut(s) 111, 289
AsuHPI GGTGA 3 cut(s) 118, 680, 954
AsuII TTCGAA 1 cut(s) 8
AvaI CYCGRG 1 cut(s) 481
AvaII GGWCC 2 cut(s) 111, 289
BamHI GGATCC 1 cut(s) 1171
BauI CACGAG 1 cut(s) 1063
BbsI GAAGAC 2 cut(s) 644, 1095
Bbv12I GWGCWC 2 cut(s) 874, 1164
BbvI GCAGC 1 cut(s) 1263
BccI CCATC 3 cut(s) 126, 507, 760
BceAI ACGGC 2 cut(s) 308, 1108
BciT130I CCWGG 1 cut(s) 971
BciVI GTATCC 2 cut(s) 375, 596
BclI TGATCA 1 cut(s) 217
BcoDI GTCTC 4 cut(s) 300, 981, 1050, 1225
BcuI ACTAGT 1 cut(s) 1391
BfaI CTAG 5 cut(s) 164, 785, 831, 1392, 1411
BfmI CTRYAG 2 cut(s) 694, 1277
BfuI GTATCC 2 cut(s) 375, 596
BisI GCNGC 2 cut(s) 1003, 1277
BlsI GCNGC 2 cut(s) 1004, 1278
BmcAI AGTACT 1 cut(s) 1271
Bme1390I CCNGG 1 cut(s) 971
Bme18I GGWCC 2 cut(s) 111, 289
BmeRI GACNNNNNGTC 1 cut(s) 1039
BmeT110I CYCGRG 1 cut(s) 481
BmgT120I GGNCC 2 cut(s) 111, 289
BmiI GGNNCC 2 cut(s) 1173, 1374
BmrFI CCNGG 1 cut(s) 971
BmsI GCATC 3 cut(s) 49, 476, 1122
BpiI GAAGAC 2 cut(s) 644, 1095
BpmI CTGGAG 1 cut(s) 992
Bpu14I TTCGAA 1 cut(s) 8
BpuEI CTTGAG 2 cut(s) 913, 1196
BsaBI GATNNNNATC 1 cut(s) 1323
BsaJI CCNNGG 1 cut(s) 1376
BsaWI WCCGGW 2 cut(s) 55, 174
Bsc4I CCNNNNNNNGG 3 cut(s) 470, 765, 1108
Bse1I ACTGG 3 cut(s) 292, 426, 456
Bse3DI GCAATG 1 cut(s) 618
Bse8I GATNNNNATC 1 cut(s) 1323
BseBI CCWGG 1 cut(s) 971
BseDI CCNNGG 1 cut(s) 1376
BseGI GGATG 4 cut(s) 64, 75, 1324, 1342
BseJI GATNNNNATC 1 cut(s) 1323
BseLI CCNNNNNNNGG 3 cut(s) 470, 765, 1108
BseMI GCAATG 1 cut(s) 618
BseMII CTCAG 3 cut(s) 654, 1110, 1125
BseNI ACTGG 3 cut(s) 292, 426, 456
BseRI GAGGAG 1 cut(s) 758
BseXI GCAGC 1 cut(s) 1263
BseYI CCCAGC 2 cut(s) 359, 930
Bsh1236I CGCG 1 cut(s) 1248
BsiHKAI GWGCWC 2 cut(s) 874, 1164
BsiHKCI CYCGRG 1 cut(s) 481
BsiSI CCGG 3 cut(s) 56, 175, 795
BslFI GGGAC 1 cut(s) 478
BslI CCNNNNNNNGG 3 cut(s) 470, 765, 1108
BsmAI GTCTC 4 cut(s) 300, 981, 1050, 1225
BsmFI GGGAC 1 cut(s) 478
BsmI GAATGC 1 cut(s) 926
BsoBI CYCGRG 1 cut(s) 481
Bsp119I TTCGAA 1 cut(s) 8
Bsp1286I GDGCHC 2 cut(s) 874, 1164
Bsp1407I TGTACA 1 cut(s) 1353
Bsp143I GATC 6 cut(s) 42, 217, 312, 826, 1171, 1324
BspACI CCGC 1 cut(s) 1002
BspCNI CTCAG 3 cut(s) 655, 1109, 1126
BspFNI CGCG 1 cut(s) 1248
BspHI TCATGA 1 cut(s) 187
BspLI GGNNCC 2 cut(s) 1173, 1374
BspMAI CTGCAG 1 cut(s) 1281
BspPI GGATC 5 cut(s) 50, 320, 821, 1166, 1179
BspT104I TTCGAA 1 cut(s) 8
BsrDI GCAATG 1 cut(s) 618
BsrGI TGTACA 1 cut(s) 1353
BsrI ACTGG 3 cut(s) 292, 426, 456
BssECI CCNNGG 1 cut(s) 1376
BssMI GATC 6 cut(s) 42, 217, 312, 826, 1171, 1324
BssSI CACGAG 1 cut(s) 1063
BssT1I CCWWGG 1 cut(s) 1376
Bst2BI CACGAG 1 cut(s) 1063
Bst2UI CCWGG 1 cut(s) 971
Bst4CI ACNGT 1 cut(s) 1399
Bst6I CTCTTC 3 cut(s) 1065, 1119, 1137
BstAUI TGTACA 1 cut(s) 1353
BstBI TTCGAA 1 cut(s) 8
BstDEI CTNAG 5 cut(s) 644, 663, 1096, 1134, 1328
BstENI CCTNNNNNAGG 1 cut(s) 468
BstF5I GGATG 4 cut(s) 64, 75, 1324, 1342
BstFNI CGCG 1 cut(s) 1248
BstHHI GCGC 1 cut(s) 853
BstKTI GATC 6 cut(s) 45, 220, 315, 829, 1174, 1327
BstMAI GTCTC 4 cut(s) 300, 981, 1050, 1225
BstMBI GATC 6 cut(s) 42, 217, 312, 826, 1171, 1324
BstMWI GCNNNNNNNGC 1 cut(s) 857
BstNI CCWGG 1 cut(s) 971
BstSCI CCNGG 1 cut(s) 969
BstSFI CTRYAG 2 cut(s) 694, 1277
BstUI CGCG 1 cut(s) 1248
BstV1I GCAGC 1 cut(s) 1263
BstV2I GAAGAC 2 cut(s) 644, 1095
BstX2I RGATCY 1 cut(s) 1171
BstYI RGATCY 1 cut(s) 1171
BsuI GTATCC 2 cut(s) 375, 596
BtgZI GCGATG 1 cut(s) 1263
BtsCI GGATG 4 cut(s) 64, 75, 1324, 1342
BtsI GCAGTG 1 cut(s) 318
BtsIMutI CAGTG 4 cut(s) 52, 318, 419, 463
CciI TCATGA 1 cut(s) 187
CfoI GCGC 1 cut(s) 853
Cfr13I GGNCC 2 cut(s) 111, 289
Csp6I GTAC 6 cut(s) 331, 560, 632, 1270, 1354, 1395
CspCI CAANNNNNGTGG 2 cut(s) 84, 119
CviAII CATG 9 cut(s) 188, 221, 369, 824, 1006, 1085, 1103, 1139, 1157
CviQI GTAC 6 cut(s) 331, 560, 632, 1270, 1354, 1395
DdeI CTNAG 5 cut(s) 644, 663, 1096, 1134, 1328
DpnI GATC 6 cut(s) 44, 219, 314, 828, 1173, 1326
DpnII GATC 6 cut(s) 42, 217, 312, 826, 1171, 1324
DraI TTTAAA 1 cut(s) 516
DraIII CACNNNGTG 1 cut(s) 1168
DriI GACNNNNNGTC 1 cut(s) 1039
Eam1104I CTCTTC 3 cut(s) 1065, 1119, 1137
Eam1105I GACNNNNNGTC 1 cut(s) 1039
EarI CTCTTC 3 cut(s) 1065, 1119, 1137
Eco130I CCWWGG 1 cut(s) 1376
Eco32I GATATC 1 cut(s) 352
Eco47I GGWCC 2 cut(s) 111, 289
Eco57I CTGAAG 4 cut(s) 509, 656, 794, 923
Eco88I CYCGRG 1 cut(s) 481
EcoNI CCTNNNNNAGG 1 cut(s) 468
EcoO109I RGGNCCY 1 cut(s) 111
EcoRI GAATTC 3 cut(s) 4, 446, 1021
EcoRII CCWGG 1 cut(s) 969
EcoRV GATATC 1 cut(s) 352
EcoT14I CCWWGG 1 cut(s) 1376
EcoT22I ATGCAT 1 cut(s) 64
ErhI CCWWGG 1 cut(s) 1376
FaeI CATG 9 cut(s) 191, 224, 372, 827, 1009, 1088, 1106, 1142, 1160
FaqI GGGAC 1 cut(s) 478
FatI CATG 9 cut(s) 187, 220, 368, 823, 1005, 1084, 1102, 1138, 1156
FauNDI CATATG 3 cut(s) 100, 143, 410
FbaI TGATCA 1 cut(s) 217
FblI GTMKAC 2 cut(s) 125, 805
Fnu4HI GCNGC 2 cut(s) 1003, 1277
FokI GGATG 4 cut(s) 62, 71, 1331, 1349
Fsp4HI GCNGC 2 cut(s) 1003, 1277
FspBI CTAG 5 cut(s) 164, 785, 831, 1392, 1411
GlaI GCGC 1 cut(s) 852
GluI GCNGC 2 cut(s) 1003, 1277
GsaI CCCAGC 2 cut(s) 363, 934
GsuI CTGGAG 1 cut(s) 992
HapII CCGG 3 cut(s) 56, 175, 795
HhaI GCGC 1 cut(s) 853
Hin1II CATG 9 cut(s) 191, 224, 372, 827, 1009, 1088, 1106, 1142, 1160
Hin6I GCGC 1 cut(s) 851
HinP1I GCGC 1 cut(s) 851
HincII GTYRAC 1 cut(s) 523
HindII GTYRAC 1 cut(s) 523
HindIII AAGCTT 1 cut(s) 719
HinfI GANTC 6 cut(s) 19, 484, 602, 681, 974, 1058
HpaII CCGG 3 cut(s) 56, 175, 795
HphI GGTGA 3 cut(s) 118, 680, 954
Hpy166II GTNNAC 5 cut(s) 126, 289, 523, 806, 821
Hpy188I TCNGA 6 cut(s) 445, 489, 1027, 1045, 1099, 1135
Hpy8I GTNNAC 5 cut(s) 126, 289, 523, 806, 821
HpyAV CCTTC 2 cut(s) 599, 1102
HpyCH4III ACNGT 1 cut(s) 1399
HpyCH4IV ACGT 3 cut(s) 525, 991, 1290
HpyCH4V TGCA 5 cut(s) 62, 224, 414, 467, 1279
HpyF10VI GCNNNNNNNGC 1 cut(s) 857
HpyF3I CTNAG 5 cut(s) 644, 663, 1096, 1134, 1328
HpySE526I ACGT 3 cut(s) 525, 991, 1290
Hsp92II CATG 9 cut(s) 191, 224, 372, 827, 1009, 1088, 1106, 1142, 1160
HspAI GCGC 1 cut(s) 851
Ksp22I TGATCA 1 cut(s) 217
Kzo9I GATC 6 cut(s) 42, 217, 312, 826, 1171, 1324
Lsp1109I GCAGC 1 cut(s) 1263
LweI GCATC 3 cut(s) 49, 476, 1122
MaeI CTAG 5 cut(s) 164, 785, 831, 1392, 1411
MaeII ACGT 3 cut(s) 525, 991, 1290
MaeIII GTNAC 5 cut(s) 236, 424, 736, 844, 1286
MalI GATC 6 cut(s) 44, 219, 314, 828, 1173, 1326
MboI GATC 6 cut(s) 42, 217, 312, 826, 1171, 1324
MboII GAAGA 9 cut(s) 148, 223, 578, 649, 1082, 1100, 1136, 1154, 1360
MflI RGATCY 1 cut(s) 1171
MhlI GDGCHC 2 cut(s) 874, 1164
MluCI AATT 8 cut(s) 4, 200, 446, 610, 709, 798, 1021, 1403
MlyI GAGTC 4 cut(s) 28, 493, 983, 1052
MmeI TCCRAC 2 cut(s) 573, 1236
Mph1103I ATGCAT 1 cut(s) 64
MseI TTAA 3 cut(s) 303, 515, 1367
MspA1I CMGCKG 1 cut(s) 1002
MspI CCGG 3 cut(s) 56, 175, 795
MspR9I CCNGG 1 cut(s) 971
Mva1269I GAATGC 1 cut(s) 926
MvaI CCWGG 1 cut(s) 971
MvnI CGCG 1 cut(s) 1248
MwoI GCNNNNNNNGC 1 cut(s) 857
NdeI CATATG 3 cut(s) 100, 143, 410
NdeII GATC 6 cut(s) 42, 217, 312, 826, 1171, 1324
NlaIII CATG 9 cut(s) 191, 224, 372, 827, 1009, 1088, 1106, 1142, 1160
NlaIV GGNNCC 2 cut(s) 1173, 1374
NmuCI GTSAC 3 cut(s) 736, 844, 1286
NsiI ATGCAT 1 cut(s) 64
NspV TTCGAA 1 cut(s) 8
PagI TCATGA 1 cut(s) 187
PctI GAATGC 1 cut(s) 926
PfeI GAWTC 2 cut(s) 602, 681
PfoI TCCNGGA 1 cut(s) 969
PkrI GCNGC 2 cut(s) 1004, 1278
PleI GAGTC 4 cut(s) 27, 492, 982, 1052
PpsI GAGTC 4 cut(s) 27, 492, 982, 1052
PpuMI RGGWCCY 1 cut(s) 111
PshBI ATTAAT 1 cut(s) 303
Psp5II RGGWCCY 1 cut(s) 111
Psp6I CCWGG 1 cut(s) 969
PspFI CCCAGC 2 cut(s) 359, 930
PspGI CCWGG 1 cut(s) 969
PspN4I GGNNCC 2 cut(s) 1173, 1374
PspPI GGNCC 2 cut(s) 111, 289
PspPPI RGGWCCY 1 cut(s) 111
PstI CTGCAG 1 cut(s) 1281
PsuI RGATCY 1 cut(s) 1171
RsaI GTAC 6 cut(s) 332, 561, 633, 1271, 1355, 1396
RsaNI GTAC 6 cut(s) 331, 560, 632, 1270, 1354, 1395
SaqAI TTAA 3 cut(s) 303, 515, 1367
SatI GCNGC 2 cut(s) 1003, 1277
Sau3AI GATC 6 cut(s) 42, 217, 312, 826, 1171, 1324
Sau96I GGNCC 2 cut(s) 111, 289
ScaI AGTACT 1 cut(s) 1271
SchI GAGTC 4 cut(s) 28, 493, 983, 1052
ScrFI CCNGG 1 cut(s) 971
SduI GDGCHC 2 cut(s) 874, 1164
SfaNI GCATC 3 cut(s) 49, 476, 1122
SfcI CTRYAG 2 cut(s) 694, 1277
SfuI TTCGAA 1 cut(s) 8
SinI GGWCC 2 cut(s) 111, 289
SmlI CTYRAG 2 cut(s) 892, 1211
SmoI CTYRAG 2 cut(s) 892, 1211
SpeI ACTAGT 1 cut(s) 1391
Sse9I AATT 8 cut(s) 4, 200, 446, 610, 709, 798, 1021, 1403
SsiI CCGC 1 cut(s) 1002
SspI AATATT 1 cut(s) 250
SspMI CTAG 5 cut(s) 164, 785, 831, 1392, 1411
StyD4I CCNGG 1 cut(s) 969
StyI CCWWGG 1 cut(s) 1376
TaaI ACNGT 1 cut(s) 1399
TaiI ACGT 3 cut(s) 528, 994, 1293
TaqI TCGA 4 cut(s) 8, 34, 592, 1116
TasI AATT 8 cut(s) 4, 200, 446, 610, 709, 798, 1021, 1403
TatI WGTACW 5 cut(s) 559, 631, 1269, 1353, 1394
TauI GCSGC 1 cut(s) 1005
TfiI GAWTC 2 cut(s) 602, 681
Tru1I TTAA 3 cut(s) 303, 515, 1367
Tru9I TTAA 3 cut(s) 303, 515, 1367
TscAI CASTG 4 cut(s) 52, 325, 426, 463
TseFI GTSAC 3 cut(s) 736, 844, 1286
TseI GCWGC 1 cut(s) 1276
Tsp45I GTSAC 3 cut(s) 736, 844, 1286
TspDTI ATGAA 7 cut(s) 17, 176, 439, 1065, 1101, 1155, 1353
TspGWI ACGGA 2 cut(s) 224, 595
TspRI CASTG 4 cut(s) 52, 325, 426, 463
VpaK11BI GGWCC 2 cut(s) 111, 289
VspI ATTAAT 1 cut(s) 303
XagI CCTNNNNNAGG 1 cut(s) 468
XapI RAATTY 7 cut(s) 4, 200, 446, 610, 798, 1021, 1403
XbaI TCTAGA 1 cut(s) 163
XmiI GTMKAC 2 cut(s) 125, 805
XspI CTAG 5 cut(s) 164, 785, 831, 1392, 1411
ZrmI AGTACT 1 cut(s) 1271
Zsp2I ATGCAT 1 cut(s) 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.