RchiOBHm_Chr5g0028581

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000062
Physical Location & Seq
Forward (+)
22369443 .. 22371766
2324 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30800

Sequence Viewer

Length: 1491 bp
ATGTCGTTCTCAGATGATTATCCCTTTGTTTTTCGGCAACAAATCCGATCTTTCAGGGGTGAGGATAGGATCAGTCAATTACCAGATGCTGTTCTTCGTCACATACTTTCCTTTGTTCCAACAACCAAATGTGTTGTGAGAACCTGCATTTTGTCTAAAAGGTGGAAGGACATATGGGCCTCTATTCCCAATCTATACTTCCGTGATGAAGAGTTCTCCTCTTCTGCTGATTTCATAGCCTTCGTTGATCGTGTGCTTCTCCATCGTGGTTCATCAGCCATTCAAAAGTTCCATCTTCATTTCAATCGTTATTGTGCTGAGGATTTTTCTCGTGTTGATAGTTGGATTAGCACTGCCGTAAGGTGTAATGTTGTGGAACTAGTCCTTTCTATCGGTTCAGGTGGACAAGCGATGTTTGAGTTGCCTCTAAGCCTTGTGACTTGCAAAACACTTGAGGTTTTGAGGCTGATGATGTCATTGTTTATCATCAATAATGTGCCTACATCAGGGTGTTTCCCAAGCCTGAAGTGCTTCCATCTCCATTTTACAGATAACTATGCTAATTACACCGCGATGAGGTTGTTTTATTTCTCTGTGCTTGAACATTTTACTATAGATGGAGATCCTGGACCAAGTTTATTGGATCTCAACATCTTTGCTCCTGAATTGAAGACATTAAGGATAGAATTTTCCAGTTCAAATGATATGCATAAGTATTACAATATTGATATTGATGCCCCGGATCTTGAGAAACTTGATCTCAAGGTGGGTTCTCTGTCAAATTTTAGTTTGACGGATACAAAGTCGCTAGTTGAAGCCGATATTAAACTCTGTTTCCATCCCAATGAAGATTATGTACAAGAGGACTCTGTTAGGCGTGATACTGAGTTTCTGGCAGCAATTTCTATTGTTAAATATCTGTCTCTTTCCGGGAGTATCTATGAGGCTTGCTCTGTGCCTGCATTTGATAATTTGATCAAACTGAGGCTGGTTCATTTTGGCGGCTCTCACTGGTGGAAAACACTAATGAAGTTGCTCGAGAGATCACCTAATCTAGAATGTCTTGTAATAGACCACCAGATCCATCCAACCCGAAGACAGGTGGAAGTGGAGGTGATTGAACTTGATCCTGAGAAAGAAGAGGAGGTGATTGAACATACTGGATATGAAGTGTCATTGATTGAAGTTACAAAGTACACAAAAGTGCTGAACTGGATTCCACCAAACTCTGTTCCCAACTGTTTGCTGTCGCACTTAAAGACCATCTCCATAAGGGGATTCAGGGGAAAGGGTTGCAATGGATATCTAGACGAGATGGAATTGACCAAGTATCTGTTAAAGAATGGTCGAGTTTTGGAGAAGATGATTATTTATACTCCTGGTGCATTTCGAGATACAAAAGAGGATATCTTCAACGAAACTTCTATGATTGAATGGAGTTCTAAGGTTGTTCAAGTTGAAATTATTGAGAAGATGTTTTATGGGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

496

Amino Acids

57.16

Weight (kDa)

5.6

Isoelectric Point (pI)

41.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 24 - 63 8.9e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 92 - 398 2.7e-09 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 112 - 254 2.7e-06 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 408 - 457 8.9e-15 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 152
AccII CGCG 1 cut(s) 572
AciI CCGC 2 cut(s) 570, 1002
AclWI GGATC 6 cut(s) 77, 617, 651, 750, 1075, 1121
AcsI RAATTY 2 cut(s) 686, 781
AcuI CTGAAG 1 cut(s) 545
AfaI GTAC 2 cut(s) 858, 1196
AfiI CCNNNNNNNGG 3 cut(s) 506, 576, 1099
AhlI ACTAGT 1 cut(s) 379
AjnI CCWGG 2 cut(s) 625, 1378
AjuI GAANNNNNNNTTGG 2 cut(s) 182, 214
AleI CACNNNNGTG 1 cut(s) 1202
Alw26I GTCTC 1 cut(s) 927
AlwI GGATC 6 cut(s) 77, 617, 651, 750, 1075, 1121
AlwNI CAGNNNCTG 1 cut(s) 89
Ama87I CYCGRG 1 cut(s) 1037
AoxI GGCC 1 cut(s) 177
ApeKI GCWGC 1 cut(s) 896
ApoI RAATTY 2 cut(s) 686, 781
Asp700I GAANNNNTTC 1 cut(s) 530
AspS9I GGNCC 2 cut(s) 177, 629
AsuC2I CCSGG 2 cut(s) 740, 931
AsuHPI GGTGA 4 cut(s) 71, 1038, 1126, 1159
AvaI CYCGRG 1 cut(s) 1037
AvaII GGWCC 1 cut(s) 629
BarI GAAGNNNNNNTAC 2 cut(s) 840, 872
BauI CACGAG 1 cut(s) 330
BbsI GAAGAC 2 cut(s) 677, 1102
BbvCI CCTCAGC 1 cut(s) 318
BbvI GCAGC 1 cut(s) 908
BccI CCATC 8 cut(s) 270, 300, 543, 611, 846, 1092, 1271, 1309
BceAI ACGGC 1 cut(s) 341
BciT130I CCWGG 2 cut(s) 627, 1380
BciVI GTATCC 1 cut(s) 790
BclI TGATCA 1 cut(s) 975
BcnI CCSGG 2 cut(s) 740, 931
BcoDI GTCTC 1 cut(s) 927
BcuI ACTAGT 1 cut(s) 379
BfaI CTAG 4 cut(s) 380, 809, 1055, 1307
BfmI CTRYAG 1 cut(s) 612
BfuAI ACCTGC 1 cut(s) 152
BfuI GTATCC 1 cut(s) 790
BisI GCNGC 2 cut(s) 897, 1003
BlsI GCNGC 2 cut(s) 898, 1004
Bme1390I CCNGG 4 cut(s) 627, 740, 931, 1380
Bme18I GGWCC 1 cut(s) 629
BmeT110I CYCGRG 1 cut(s) 1037
BmgT120I GGNCC 2 cut(s) 177, 629
BmrFI CCNGG 4 cut(s) 627, 740, 931, 1380
BmsI GCATC 2 cut(s) 76, 724
BpiI GAAGAC 2 cut(s) 677, 1102
BplI GAGNNNNNCTC 4 cut(s) 203, 235, 935, 967
Bpu10I CCTNAGC 1 cut(s) 318
BpuEI CTTGAG 3 cut(s) 473, 746, 767
BpuMI CCSGG 2 cut(s) 740, 931
BsaBI GATNNNNATC 2 cut(s) 18, 621
BsaJI CCNNGG 1 cut(s) 738
Bsc4I CCNNNNNNNGG 3 cut(s) 506, 576, 1099
Bse1I ACTGG 4 cut(s) 693, 1016, 1165, 1217
Bse3DI GCAATG 1 cut(s) 1303
Bse8I GATNNNNATC 2 cut(s) 18, 621
BseBI CCWGG 2 cut(s) 627, 1380
BseDI CCNNGG 1 cut(s) 738
BseGI GGATG 2 cut(s) 838, 1084
BseJI GATNNNNATC 2 cut(s) 18, 621
BseLI CCNNNNNNNGG 3 cut(s) 506, 576, 1099
BseMI GCAATG 1 cut(s) 1303
BseMII CTCAG 5 cut(s) 24, 309, 876, 974, 1122
BseNI ACTGG 4 cut(s) 693, 1016, 1165, 1217
BseRI GAGGAG 2 cut(s) 208, 1157
BseXI GCAGC 1 cut(s) 908
Bsh1236I CGCG 1 cut(s) 572
BshFI GGCC 1 cut(s) 179
BsiHKCI CYCGRG 1 cut(s) 1037
BsiSI CCGG 2 cut(s) 740, 930
BslI CCNNNNNNNGG 3 cut(s) 506, 576, 1099
BsmAI GTCTC 1 cut(s) 927
BsnI GGCC 1 cut(s) 179
BsoBI CYCGRG 1 cut(s) 1037
Bsp1407I TGTACA 1 cut(s) 856
BspACI CCGC 2 cut(s) 570, 1002
BspANI GGCC 1 cut(s) 179
BspCNI CTCAG 5 cut(s) 23, 310, 877, 975, 1123
BspFNI CGCG 1 cut(s) 572
BspMI ACCTGC 1 cut(s) 152
BspPI GGATC 6 cut(s) 77, 617, 651, 750, 1075, 1121
BsrDI GCAATG 1 cut(s) 1303
BsrGI TGTACA 1 cut(s) 856
BsrI ACTGG 4 cut(s) 693, 1016, 1165, 1217
BssECI CCNNGG 1 cut(s) 738
BssSI CACGAG 1 cut(s) 330
Bst2BI CACGAG 1 cut(s) 330
Bst2UI CCWGG 2 cut(s) 627, 1380
Bst4CI ACNGT 1 cut(s) 1241
Bst6I CTCTTC 3 cut(s) 204, 226, 1134
BstAUI TGTACA 1 cut(s) 856
BstC8I GCNNGC 2 cut(s) 949, 960
BstDEI CTNAG 7 cut(s) 10, 318, 428, 885, 983, 1131, 1443
BstENI CCTNNNNNAGG 1 cut(s) 504
BstF5I GGATG 2 cut(s) 838, 1084
BstFNI CGCG 1 cut(s) 572
BstMAI GTCTC 1 cut(s) 927
BstMWI GCNNNNNNNGC 1 cut(s) 528
BstNI CCWGG 2 cut(s) 627, 1380
BstSCI CCNGG 4 cut(s) 625, 738, 929, 1378
BstSFI CTRYAG 1 cut(s) 612
BstUI CGCG 1 cut(s) 572
BstV1I GCAGC 1 cut(s) 908
BstV2I GAAGAC 2 cut(s) 677, 1102
BstX2I RGATCY 4 cut(s) 622, 643, 742, 1080
BstYI RGATCY 4 cut(s) 622, 643, 742, 1080
BsuI GTATCC 1 cut(s) 790
BsuRI GGCC 1 cut(s) 179
BtgZI GCGATG 2 cut(s) 425, 587
BtsCI GGATG 2 cut(s) 838, 1084
BtsI GCAGTG 1 cut(s) 351
BtsIMutI CAGTG 2 cut(s) 351, 1009
BveI ACCTGC 1 cut(s) 152
Cac8I GCNNGC 2 cut(s) 949, 960
CaiI CAGNNNCTG 1 cut(s) 89
Cfr13I GGNCC 2 cut(s) 177, 629
Csp6I GTAC 2 cut(s) 857, 1195
CviQI GTAC 2 cut(s) 857, 1195
DdeI CTNAG 7 cut(s) 10, 318, 428, 885, 983, 1131, 1443
Eam1104I CTCTTC 3 cut(s) 204, 226, 1134
EarI CTCTTC 3 cut(s) 204, 226, 1134
Eco32I GATATC 2 cut(s) 1304, 1408
Eco47I GGWCC 1 cut(s) 629
Eco57I CTGAAG 1 cut(s) 545
Eco88I CYCGRG 1 cut(s) 1037
EcoNI CCTNNNNNAGG 1 cut(s) 504
EcoRII CCWGG 2 cut(s) 625, 1378
EcoRV GATATC 2 cut(s) 1304, 1408
EcoT22I ATGCAT 1 cut(s) 711
FauNDI CATATG 1 cut(s) 173
FbaI TGATCA 1 cut(s) 975
Fnu4HI GCNGC 2 cut(s) 897, 1003
FokI GGATG 2 cut(s) 825, 1071
Fsp4HI GCNGC 2 cut(s) 897, 1003
FspBI CTAG 4 cut(s) 380, 809, 1055, 1307
GluI GCNGC 2 cut(s) 897, 1003
HaeIII GGCC 1 cut(s) 179
HapII CCGG 2 cut(s) 740, 930
HinfI GANTC 3 cut(s) 866, 1216, 1278
HpaII CCGG 2 cut(s) 740, 930
HphI GGTGA 4 cut(s) 71, 1038, 1126, 1159
Hpy166II GTNNAC 2 cut(s) 404, 1197
Hpy188I TCNGA 2 cut(s) 13, 47
Hpy188III TCNNGA 7 cut(s) 662, 746, 1039, 1055, 1130, 1307, 1391
Hpy8I GTNNAC 2 cut(s) 404, 1197
HpyAV CCTTC 2 cut(s) 160, 250
HpyCH4III ACNGT 1 cut(s) 1241
HpyCH4V TGCA 6 cut(s) 147, 444, 709, 962, 1296, 1385
HpyF10VI GCNNNNNNNGC 1 cut(s) 528
HpyF3I CTNAG 7 cut(s) 10, 318, 428, 885, 983, 1131, 1443
Ksp22I TGATCA 1 cut(s) 975
LmnI GCTCC 1 cut(s) 664
Lsp1109I GCAGC 1 cut(s) 908
LweI GCATC 2 cut(s) 76, 724
MaeI CTAG 4 cut(s) 380, 809, 1055, 1307
MaeIII GTNAC 3 cut(s) 98, 436, 1186
MflI RGATCY 4 cut(s) 622, 643, 742, 1080
MluCI AATT 9 cut(s) 77, 562, 665, 686, 781, 900, 970, 1319, 1461
MlyI GAGTC 1 cut(s) 860
MmeI TCCRAC 3 cut(s) 143, 323, 1112
Mph1103I ATGCAT 1 cut(s) 711
MroXI GAANNNNTTC 1 cut(s) 530
MseI TTAA 5 cut(s) 677, 825, 912, 1256, 1337
MslI CAYNNNNRTG 4 cut(s) 508, 572, 843, 1202
MspI CCGG 2 cut(s) 740, 930
MspR9I CCNGG 4 cut(s) 627, 740, 931, 1380
MvaI CCWGG 2 cut(s) 627, 1380
MvnI CGCG 1 cut(s) 572
MwoI GCNNNNNNNGC 1 cut(s) 528
NciI CCSGG 2 cut(s) 740, 931
NdeI CATATG 1 cut(s) 173
NmuCI GTSAC 2 cut(s) 98, 436
NsiI ATGCAT 1 cut(s) 711
OliI CACNNNNGTG 1 cut(s) 1202
PaeR7I CTCGAG 1 cut(s) 1037
PdmI GAANNNNTTC 1 cut(s) 530
PfeI GAWTC 2 cut(s) 1216, 1278
PfoI TCCNGGA 2 cut(s) 625, 929
PkrI GCNGC 2 cut(s) 898, 1004
PleI GAGTC 1 cut(s) 860
PpsI GAGTC 1 cut(s) 860
Psp6I CCWGG 2 cut(s) 625, 1378
PspGI CCWGG 2 cut(s) 625, 1378
PspPI GGNCC 2 cut(s) 177, 629
PstNI CAGNNNCTG 1 cut(s) 89
PsuI RGATCY 4 cut(s) 622, 643, 742, 1080
RsaI GTAC 2 cut(s) 858, 1196
RsaNI GTAC 2 cut(s) 857, 1195
RseI CAYNNNNRTG 4 cut(s) 508, 572, 843, 1202
SaqAI TTAA 5 cut(s) 677, 825, 912, 1256, 1337
SatI GCNGC 2 cut(s) 897, 1003
Sau96I GGNCC 2 cut(s) 177, 629
SchI GAGTC 1 cut(s) 860
ScrFI CCNGG 4 cut(s) 627, 740, 931, 1380
SfaNI GCATC 2 cut(s) 76, 724
SfcI CTRYAG 1 cut(s) 612
Sfr274I CTCGAG 1 cut(s) 1037
SinI GGWCC 1 cut(s) 629
SlaI CTCGAG 1 cut(s) 1037
SmiMI CAYNNNNRTG 4 cut(s) 508, 572, 843, 1202
SmlI CTYRAG 4 cut(s) 452, 746, 761, 1037
SmoI CTYRAG 4 cut(s) 452, 746, 761, 1037
SpeI ACTAGT 1 cut(s) 379
Sse9I AATT 9 cut(s) 77, 562, 665, 686, 781, 900, 970, 1319, 1461
SsiI CCGC 2 cut(s) 570, 1002
SspI AATATT 1 cut(s) 724
SspMI CTAG 4 cut(s) 380, 809, 1055, 1307
StyD4I CCNGG 4 cut(s) 625, 738, 929, 1378
TaaI ACNGT 1 cut(s) 1241
TaqI TCGA 3 cut(s) 1038, 1348, 1390
TasI AATT 9 cut(s) 77, 562, 665, 686, 781, 900, 970, 1319, 1461
TatI WGTACW 2 cut(s) 856, 1194
TauI GCSGC 1 cut(s) 1005
TfiI GAWTC 2 cut(s) 1216, 1278
Tru1I TTAA 5 cut(s) 677, 825, 912, 1256, 1337
Tru9I TTAA 5 cut(s) 677, 825, 912, 1256, 1337
TscAI CASTG 2 cut(s) 358, 1016
TseFI GTSAC 2 cut(s) 98, 436
TseI GCWGC 1 cut(s) 896
Tsp45I GTSAC 2 cut(s) 98, 436
TspDTI ATGAA 8 cut(s) 222, 223, 261, 287, 861, 983, 1043, 1182
TspGWI ACGGA 2 cut(s) 191, 809
TspRI CASTG 2 cut(s) 358, 1016
VpaK11BI GGWCC 1 cut(s) 629
XagI CCTNNNNNAGG 1 cut(s) 504
XapI RAATTY 2 cut(s) 686, 781
XbaI TCTAGA 2 cut(s) 1054, 1306
XhoI CTCGAG 1 cut(s) 1037
XmnI GAANNNNTTC 1 cut(s) 530
XspI CTAG 4 cut(s) 380, 809, 1055, 1307
Zsp2I ATGCAT 1 cut(s) 711
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.