AT5G44960

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000062
Physical Location & Seq
Forward (+)
18153852 .. 18155391
1540 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G44960.1

Sequence Viewer

Length: 1251 bp
ATGGAGGAGTGCGATTATATCAACGAATTGCCTGATTCTTTACTAACTCAGATACTCTTAGACCTTCGGACCAAAGATTCTGTTAAGACAAGCGTGTCGTCGAAGAGATGGAGAAATCTTTGGTTAAACGTTCCTGGACTTGACTTATTCAGCCTTCAATTCACAAATCCTCATCATGAAGAAGGCTTGATAAAGTTTATGGACAGATTTATGGAGTCTAACTGCAGGTCACGCCTGCAAAAGTTCATGATAAGGTATTTCGAATGCAATGGTTATCGAGATCGATTCATGGAGTTGATCGGTACAGTGGTTGATTGTGGAATTCAACATTTGTATGTTTATATGCATACTTGTAATAGAGTTGATTTCATACGTCAAAACATTTACAAGAGCAAGACATTGGTCTCTTTGAAGCTTTATAACGTAGAGTTGAAGAATCCAGACTTTGTTGTTTCTCTACCTTGTCTCAAGATCTTGAAACTGATGAAAATTTGTTACGGTGAGGATGGCCCTTTGGTTGTGGAGAAGCTCATCTCAGGATGTCCTGTTCTTGAAGATCTTGAGCTGATTAAGCCTTTTGATATTTTGACTCAGGACGTTATACTGTTTCTGCGTATTGATGCTCCACGACTCAAGTATATGACATTTTACGAGAGTCGATTTGATAGGATTATGGTAAAGAACATGAGTTCCTTGTTTAGTATCGAAATTAGAGCCAAATCTAGTTTTGAGTATGGCGGTCTTTTGAAAGCAGAGGATCCAAGAAAGAGAGCTATTATCTGTGATTTTTTAACCGTGATATCTAGTGTAAGGCATATGATCATTTCTGGGAGCATTCTAGAGGAGCTACATTCTTATTCCAAACTAGGATGGATTCCCCAATTCCGTAACTTATATCATTTGCAGGCTTCGTTCTTCGGTACATCGTTACAACTATTGCCAACCTTTCTTGAGAGCTGCCCAAATCTGAAAAACCTAATCATGGACTATGGGGCATTTAAGGAAGAAAATATCGACTTTCACGAAGTGCCTCAGTGTTTGATATCGACTCTCGAGTATGTTCACATTAACAAACTGATGATGATGGAGCAAAGTGGGATTAAACTAGTAAATTACTTTATTGAGAATTCAGCAGTCCTCAAGAAACTTACTCTACGTTTCTCATTTTTTTCTTCTATAGAGAGCGAGAGCTACAAGAAGCTTCTTACATCAACAAAGCTTTCTCCCACATGTCAAGTTATCTTTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

416

Amino Acids

48.58

Weight (kDa)

7.9

Isoelectric Point (pI)

49.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 7 - 45 7.6e-06 F-box domain
LRR_At5g56370 PF24758 103 - 233 5.8e-08 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 342 - 385 4.1e-13 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 420
AasI GACNNNNNNGTC 1 cut(s) 94
Acc36I ACCTGC 1 cut(s) 216
AciI CCGC 1 cut(s) 738
AclI AACGTT 1 cut(s) 129
AclWI GGATC 2 cut(s) 752, 765
AcsI RAATTY 3 cut(s) 321, 489, 1126
AdeI CACNNNGTG 1 cut(s) 1027
AfaI GTAC 2 cut(s) 304, 922
AfiI CCNNNNNNNGG 1 cut(s) 982
AflIII ACRYGT 1 cut(s) 1229
AgsI TTSAA 7 cut(s) 158, 326, 412, 433, 478, 554, 748
AhlI ACTAGT 1 cut(s) 1105
AjnI CCWGG 1 cut(s) 133
AloI GAACNNNNNNTCC 4 cut(s) 531, 563, 674, 706
AluBI AGCT 9 cut(s) 415, 529, 565, 773, 847, 957, 1191, 1201, 1219
AluI AGCT 9 cut(s) 415, 529, 565, 773, 847, 957, 1191, 1201, 1219
Alw26I GTCTC 2 cut(s) 409, 470
AlwI GGATC 2 cut(s) 752, 765
Ama87I CYCGRG 1 cut(s) 1052
AoxI GGCC 1 cut(s) 508
ApeKI GCWGC 1 cut(s) 957
ApoI RAATTY 3 cut(s) 321, 489, 1126
AspS9I GGNCC 2 cut(s) 69, 509
AsuHPI GGTGA 1 cut(s) 512
AsuII TTCGAA 1 cut(s) 261
AvaI CYCGRG 1 cut(s) 1052
AvaII GGWCC 1 cut(s) 69
BaeI ACNNNNGTAYC 2 cut(s) 294, 327
BamHI GGATCC 1 cut(s) 757
BbvI GCAGC 1 cut(s) 944
BccI CCATC 4 cut(s) 102, 500, 864, 1078
BciT130I CCWGG 1 cut(s) 135
BclI TGATCA 1 cut(s) 819
BcoDI GTCTC 2 cut(s) 409, 470
BcuI ACTAGT 1 cut(s) 1105
BfaI CTAG 5 cut(s) 723, 804, 839, 866, 1106
BfmI CTRYAG 2 cut(s) 223, 1176
BfuAI ACCTGC 1 cut(s) 216
BglII AGATCT 2 cut(s) 471, 556
BisI GCNGC 1 cut(s) 958
BlsI GCNGC 1 cut(s) 959
Bme1390I CCNGG 1 cut(s) 135
Bme18I GGWCC 1 cut(s) 69
BmeT110I CYCGRG 1 cut(s) 1052
BmgT120I GGNCC 2 cut(s) 69, 509
BmiI GGNNCC 1 cut(s) 759
BmrFI CCNGG 1 cut(s) 135
BmsI GCATC 1 cut(s) 610
BoxI GACNNNNGTC 1 cut(s) 401
Bpu14I TTCGAA 1 cut(s) 261
BpuEI CTTGAG 5 cut(s) 452, 581, 617, 971, 1124
Bsa29I ATCGAT 1 cut(s) 283
BsaI GGTCTC 1 cut(s) 409
Bsc4I CCNNNNNNNGG 1 cut(s) 982
Bse3DI GCAATG 1 cut(s) 274
BseBI CCWGG 1 cut(s) 135
BseCI ATCGAT 1 cut(s) 283
BseGI GGATG 3 cut(s) 511, 545, 875
BseLI CCNNNNNNNGG 1 cut(s) 982
BseMI GCAATG 1 cut(s) 274
BseMII CTCAG 4 cut(s) 62, 549, 605, 1046
BseRI GAGGAG 2 cut(s) 20, 857
BseXI GCAGC 1 cut(s) 944
BshFI GGCC 1 cut(s) 510
BshVI ATCGAT 1 cut(s) 283
BsiHKCI CYCGRG 1 cut(s) 1052
BslI CCNNNNNNNGG 1 cut(s) 982
BsmAI GTCTC 2 cut(s) 409, 470
BsmI GAATGC 2 cut(s) 269, 834
BsnI GGCC 1 cut(s) 510
Bso31I GGTCTC 1 cut(s) 409
BsoBI CYCGRG 1 cut(s) 1052
Bsp119I TTCGAA 1 cut(s) 261
Bsp143I GATC 6 cut(s) 280, 297, 471, 556, 757, 819
BspACI CCGC 1 cut(s) 738
BspANI GGCC 1 cut(s) 510
BspCNI CTCAG 4 cut(s) 61, 548, 604, 1045
BspDI ATCGAT 1 cut(s) 283
BspHI TCATGA 2 cut(s) 175, 246
BspLI GGNNCC 1 cut(s) 759
BspMAI CTGCAG 1 cut(s) 227
BspMI ACCTGC 1 cut(s) 216
BspPI GGATC 2 cut(s) 752, 765
BspT104I TTCGAA 1 cut(s) 261
BspTNI GGTCTC 1 cut(s) 409
BsrDI GCAATG 1 cut(s) 274
BssMI GATC 6 cut(s) 280, 297, 471, 556, 757, 819
Bst2UI CCWGG 1 cut(s) 135
Bst4CI ACNGT 4 cut(s) 307, 500, 606, 796
Bst6I CTCTTC 1 cut(s) 98
BstBI TTCGAA 1 cut(s) 261
BstC8I GCNNGC 2 cut(s) 236, 906
BstDEI CTNAG 5 cut(s) 48, 58, 535, 591, 1032
BstF5I GGATG 3 cut(s) 511, 545, 875
BstKTI GATC 6 cut(s) 283, 300, 474, 559, 760, 822
BstMAI GTCTC 2 cut(s) 409, 470
BstMBI GATC 6 cut(s) 280, 297, 471, 556, 757, 819
BstMWI GCNNNNNNNGC 2 cut(s) 231, 571
BstNI CCWGG 1 cut(s) 135
BstNSI RCATGY 1 cut(s) 1233
BstPAI GACNNNNGTC 1 cut(s) 401
BstSCI CCNGG 1 cut(s) 133
BstSFI CTRYAG 2 cut(s) 223, 1176
BstV1I GCAGC 1 cut(s) 944
BstX2I RGATCY 3 cut(s) 471, 556, 757
BstYI RGATCY 3 cut(s) 471, 556, 757
Bsu15I ATCGAT 1 cut(s) 283
BsuRI GGCC 1 cut(s) 510
BsuTUI ATCGAT 1 cut(s) 283
BtsCI GGATG 3 cut(s) 511, 545, 875
BtsIMutI CAGTG 2 cut(s) 312, 1040
BveI ACCTGC 1 cut(s) 216
Cac8I GCNNGC 2 cut(s) 236, 906
CciI TCATGA 2 cut(s) 175, 246
Cfr13I GGNCC 2 cut(s) 69, 509
ClaI ATCGAT 1 cut(s) 283
Csp6I GTAC 2 cut(s) 303, 921
CviAII CATG 6 cut(s) 176, 247, 289, 685, 982, 1230
CviQI GTAC 2 cut(s) 303, 921
DdeI CTNAG 5 cut(s) 48, 58, 535, 591, 1032
DpnI GATC 6 cut(s) 282, 299, 473, 558, 759, 821
DpnII GATC 6 cut(s) 280, 297, 471, 556, 757, 819
DraIII CACNNNGTG 1 cut(s) 1027
DrdI GACNNNNNNGTC 1 cut(s) 94
DseDI GACNNNNNNGTC 1 cut(s) 94
Eam1104I CTCTTC 1 cut(s) 98
EarI CTCTTC 1 cut(s) 98
Eco31I GGTCTC 1 cut(s) 409
Eco32I GATATC 2 cut(s) 801, 1044
Eco47I GGWCC 1 cut(s) 69
Eco88I CYCGRG 1 cut(s) 1052
EcoRI GAATTC 2 cut(s) 321, 1126
EcoRII CCWGG 1 cut(s) 133
EcoRV GATATC 2 cut(s) 801, 1044
EcoT22I ATGCAT 1 cut(s) 348
FaeI CATG 6 cut(s) 179, 250, 292, 688, 985, 1233
FatI CATG 6 cut(s) 175, 246, 288, 684, 981, 1229
FauNDI CATATG 1 cut(s) 816
FbaI TGATCA 1 cut(s) 819
Fnu4HI GCNGC 1 cut(s) 958
FokI GGATG 3 cut(s) 518, 552, 882
Fsp4HI GCNGC 1 cut(s) 958
FspBI CTAG 5 cut(s) 723, 804, 839, 866, 1106
GluI GCNGC 1 cut(s) 958
HaeIII GGCC 1 cut(s) 510
Hin1II CATG 6 cut(s) 179, 250, 292, 688, 985, 1233
HindIII AAGCTT 3 cut(s) 413, 1199, 1217
HphI GGTGA 1 cut(s) 512
Hpy166II GTNNAC 1 cut(s) 1063
Hpy188I TCNGA 3 cut(s) 51, 69, 969
Hpy8I GTNNAC 1 cut(s) 1063
Hpy99I CGWCG 1 cut(s) 103
HpyAV CCTTC 3 cut(s) 74, 164, 176
HpyCH4III ACNGT 4 cut(s) 307, 500, 606, 796
HpyCH4IV ACGT 5 cut(s) 129, 373, 423, 597, 1156
HpyCH4V TGCA 5 cut(s) 225, 238, 267, 346, 904
HpyF10VI GCNNNNNNNGC 2 cut(s) 231, 571
HpyF3I CTNAG 5 cut(s) 48, 58, 535, 591, 1032
HpySE526I ACGT 5 cut(s) 129, 373, 423, 597, 1156
Hsp92II CATG 6 cut(s) 179, 250, 292, 688, 985, 1233
Ksp22I TGATCA 1 cut(s) 819
Kzo9I GATC 6 cut(s) 280, 297, 471, 556, 757, 819
LmnI GCTCC 4 cut(s) 628, 831, 844, 1087
Lsp1109I GCAGC 1 cut(s) 944
LweI GCATC 1 cut(s) 610
MaeI CTAG 5 cut(s) 723, 804, 839, 866, 1106
MaeII ACGT 5 cut(s) 129, 373, 423, 597, 1156
MaeIII GTNAC 4 cut(s) 228, 494, 887, 927
MalI GATC 6 cut(s) 282, 299, 473, 558, 759, 821
MboI GATC 6 cut(s) 280, 297, 471, 556, 757, 819
MboII GAAGA 7 cut(s) 115, 191, 445, 566, 907, 1016, 1164
MflI RGATCY 3 cut(s) 471, 556, 757
MluCI AATT 8 cut(s) 26, 158, 321, 489, 708, 881, 1111, 1126
MlyI GAGTC 5 cut(s) 224, 583, 624, 664, 1042
MnlI CCTC 6 cut(s) 180, 496, 748, 835, 1041, 1148
Mph1103I ATGCAT 1 cut(s) 348
MseI TTAA 7 cut(s) 84, 125, 570, 791, 999, 1068, 1101
MslI CAYNNNNRTG 1 cut(s) 333
MspR9I CCNGG 1 cut(s) 135
Mva1269I GAATGC 2 cut(s) 269, 834
MvaI CCWGG 1 cut(s) 135
MwoI GCNNNNNNNGC 2 cut(s) 231, 571
NdeI CATATG 1 cut(s) 816
NdeII GATC 6 cut(s) 280, 297, 471, 556, 757, 819
NlaIII CATG 6 cut(s) 179, 250, 292, 688, 985, 1233
NlaIV GGNNCC 1 cut(s) 759
NmuCI GTSAC 1 cut(s) 228
NsiI ATGCAT 1 cut(s) 348
NspI RCATGY 1 cut(s) 1233
NspV TTCGAA 1 cut(s) 261
PaeR7I CTCGAG 1 cut(s) 1052
PagI TCATGA 2 cut(s) 175, 246
PciI ACATGT 1 cut(s) 1229
PcsI WCGNNNNNNNCGW 1 cut(s) 1020
PctI GAATGC 2 cut(s) 269, 834
PfeI GAWTC 5 cut(s) 35, 77, 285, 436, 874
PfoI TCCNGGA 1 cut(s) 133
PkrI GCNGC 1 cut(s) 959
PleI GAGTC 5 cut(s) 223, 583, 624, 663, 1042
PpsI GAGTC 5 cut(s) 223, 583, 624, 663, 1042
PscI ACATGT 1 cut(s) 1229
PshAI GACNNNNGTC 1 cut(s) 401
PsiI TTATAA 1 cut(s) 420
Psp1406I AACGTT 1 cut(s) 129
Psp6I CCWGG 1 cut(s) 133
PspGI CCWGG 1 cut(s) 133
PspN4I GGNNCC 1 cut(s) 759
PspPI GGNCC 2 cut(s) 69, 509
PstI CTGCAG 1 cut(s) 227
PsuI RGATCY 3 cut(s) 471, 556, 757
RsaI GTAC 2 cut(s) 304, 922
RsaNI GTAC 2 cut(s) 303, 921
RseI CAYNNNNRTG 1 cut(s) 333
SaqAI TTAA 7 cut(s) 84, 125, 570, 791, 999, 1068, 1101
SatI GCNGC 1 cut(s) 958
Sau3AI GATC 6 cut(s) 280, 297, 471, 556, 757, 819
Sau96I GGNCC 2 cut(s) 69, 509
SchI GAGTC 5 cut(s) 224, 583, 624, 664, 1042
ScrFI CCNGG 1 cut(s) 135
SfaNI GCATC 1 cut(s) 610
SfcI CTRYAG 2 cut(s) 223, 1176
Sfr274I CTCGAG 1 cut(s) 1052
SfuI TTCGAA 1 cut(s) 261
SinI GGWCC 1 cut(s) 69
SlaI CTCGAG 1 cut(s) 1052
SmiMI CAYNNNNRTG 1 cut(s) 333
SmlI CTYRAG 6 cut(s) 467, 560, 632, 950, 1052, 1139
SmoI CTYRAG 6 cut(s) 467, 560, 632, 950, 1052, 1139
SpeI ACTAGT 1 cut(s) 1105
Sse9I AATT 8 cut(s) 26, 158, 321, 489, 708, 881, 1111, 1126
SsiI CCGC 1 cut(s) 738
SspMI CTAG 5 cut(s) 723, 804, 839, 866, 1106
StyD4I CCNGG 1 cut(s) 133
TaaI ACNGT 4 cut(s) 307, 500, 606, 796
TaiI ACGT 5 cut(s) 132, 376, 426, 600, 1159
TaqI TCGA 9 cut(s) 101, 261, 277, 283, 658, 705, 1014, 1046, 1053
TasI AATT 8 cut(s) 26, 158, 321, 489, 708, 881, 1111, 1126
TfiI GAWTC 5 cut(s) 35, 77, 285, 436, 874
Tru1I TTAA 7 cut(s) 84, 125, 570, 791, 999, 1068, 1101
Tru9I TTAA 7 cut(s) 84, 125, 570, 791, 999, 1068, 1101
TscAI CASTG 2 cut(s) 312, 1040
TseFI GTSAC 1 cut(s) 228
TseI GCWGC 1 cut(s) 957
Tsp45I GTSAC 1 cut(s) 228
TspDTI ATGAA 5 cut(s) 192, 235, 277, 358, 500
TspGWI ACGGA 1 cut(s) 875
TspRI CASTG 2 cut(s) 312, 1040
VpaK11BI GGWCC 1 cut(s) 69
XapI RAATTY 3 cut(s) 321, 489, 1126
XbaI TCTAGA 1 cut(s) 838
XceI RCATGY 1 cut(s) 1233
XhoI CTCGAG 1 cut(s) 1052
XspI CTAG 5 cut(s) 723, 804, 839, 866, 1106
Zsp2I ATGCAT 1 cut(s) 348
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.