Rh5DG203100

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000062
Physical Location & Seq
Forward (+)
22418292 .. 22420779
2488 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG203100.1

Sequence Viewer

Length: 1509 bp
ATGAAAATGTCTCTGCGGATGTCGTTCTCAGATGATTATCCCTTTGTTTTTCGGCAACAAATCCGATCTTTCAGGGGTGAGGATAGGATCAGTCAATTACCAGATGCTGTTCTTCGTCACATACTTTCCTTTGTTCCAACAACCAAATGTGTTGTGAGAACCTGCATTTTGTCTAAAAGGTGGAAGGACATATGGGCCTCTATTCCCAATCTATACTTCCGTGATGAAGAGTTCTCCTCTTCTGCTGATTTCATAGCCTTCGTTGATCGTGTGCTTCTCCATCGTGGTTCATCAGCCATTCAAAAGTTCCATCTTCATTTCAATCGTTATTGTGCTGAGGATTTTTCTCGTGTTGATAGTTGGATTAGCACTGCCGTAAGGTGTAATGTTGTGGAACTAGTCCTTTCTATCGGTTCAGGTGGACAAGCGATGTTTGAGTTGCCTCTAAGCCTTGTGACTTGCAAAACACTTGAGGTTTTGAGGCTGATGATGTCATTGTTTATCATCAATAATGTGCCTACATCAGGGTGTTTCCCAAGCCTGAAGTGCTTCCATCTCCATTTTACAGATAACTATGCTAATTACACCGCGATGAGGTTGTTTTATTTCTCTGTGCTTGAACATTTTACTATAGATGGAGATCCTGGACCAAGTTTATTGGATCTCAACATCTTTGCTCCTGAATTGAAGACATTAAGGATAGAATTTTCCAGTTCAAATGATATGCATAAGTATTACAATATTGATATTGATGCCCCGGATCTTGAGAAACTTGATCTCAAGGTGGGTTCTCTGTCAAATTTTAGTTTGACGGATACAAAGTCGCTAGTTGAAGCCGATATTAAACTCTGTTTCCATCCCAATGAAGATTATGTACAAGAGGACTCTGTTAGGCGTGATACTGAGTTTCTGGCAGCAATTTCTATTGTTAAATATCTGTCTCTTTCCGGGAGTATCTATGAGGCTTGCTCTGTGCCTGCATTTGATAATTTGATCAAACTGAGGCTGGTTCATTTTGGCGGCTCTCACTGGTGGAAAACACTAATGAAGTTGCTCGAGAGATCACCTAATCTAGAATGTCTTGTAATAGACCACCAGATCCATCCAACCCGAAGACAGGTGGAAGTGGAGGTGATTGAACTTGATCCTGAGAAAGAAGAGGAGGTGATTGAACATACTGGATATGAAGTGTCATTGATTGAAGTTACAAAGTACACAAAAGTGCTGAACTGGATTCCACCAAACTCTGTTCCCAACTGTTTGCTGTCGCACTTAAAGACCATCTCCATAAGGGGATTCAGGGGAAAGGGTTGCAATGGATATCTAGACGAGATGGAATTGACCAAGTATCTGTTAAAGAATGGTCGAGTTTTGGAGAAGATGATTATTTATACTCCTGGTGCATTTCGAGATACAAAAGAGGATATCTTCAACGAAACTTCTATGATTGAATGGAGTTCTAAGGTTGTTCAAGTTGAAATTATTGAGAAGATGTTTTATGGGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

502

Amino Acids

57.9

Weight (kDa)

5.74

Isoelectric Point (pI)

42.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 30 - 69 9.1e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 98 - 404 2.8e-09 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 118 - 260 2.7e-06 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 414 - 463 9.1e-15 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 170
AccII CGCG 1 cut(s) 590
AciI CCGC 3 cut(s) 16, 588, 1020
AclWI GGATC 6 cut(s) 95, 635, 669, 768, 1093, 1139
AcsI RAATTY 2 cut(s) 704, 799
AcuI CTGAAG 1 cut(s) 563
AfaI GTAC 2 cut(s) 876, 1214
AfiI CCNNNNNNNGG 3 cut(s) 524, 594, 1117
AhlI ACTAGT 1 cut(s) 397
AjnI CCWGG 2 cut(s) 643, 1396
AjuI GAANNNNNNNTTGG 2 cut(s) 200, 232
AleI CACNNNNGTG 1 cut(s) 1220
Alw26I GTCTC 2 cut(s) 15, 945
AlwI GGATC 6 cut(s) 95, 635, 669, 768, 1093, 1139
AlwNI CAGNNNCTG 1 cut(s) 107
Ama87I CYCGRG 1 cut(s) 1055
AoxI GGCC 1 cut(s) 195
ApeKI GCWGC 1 cut(s) 914
ApoI RAATTY 2 cut(s) 704, 799
Asp700I GAANNNNTTC 1 cut(s) 548
AspS9I GGNCC 2 cut(s) 195, 647
AsuC2I CCSGG 2 cut(s) 758, 949
AsuHPI GGTGA 4 cut(s) 89, 1056, 1144, 1177
AvaI CYCGRG 1 cut(s) 1055
AvaII GGWCC 1 cut(s) 647
BarI GAAGNNNNNNTAC 2 cut(s) 858, 890
BauI CACGAG 1 cut(s) 348
BbsI GAAGAC 2 cut(s) 695, 1120
BbvCI CCTCAGC 1 cut(s) 336
BbvI GCAGC 1 cut(s) 926
BccI CCATC 8 cut(s) 288, 318, 561, 629, 864, 1110, 1289, 1327
BceAI ACGGC 1 cut(s) 359
BciT130I CCWGG 2 cut(s) 645, 1398
BciVI GTATCC 1 cut(s) 808
BclI TGATCA 1 cut(s) 993
BcnI CCSGG 2 cut(s) 758, 949
BcoDI GTCTC 2 cut(s) 15, 945
BcuI ACTAGT 1 cut(s) 397
BfaI CTAG 4 cut(s) 398, 827, 1073, 1325
BfmI CTRYAG 1 cut(s) 630
BfuAI ACCTGC 1 cut(s) 170
BfuI GTATCC 1 cut(s) 808
BisI GCNGC 2 cut(s) 915, 1021
BlsI GCNGC 2 cut(s) 916, 1022
Bme1390I CCNGG 4 cut(s) 645, 758, 949, 1398
Bme18I GGWCC 1 cut(s) 647
BmeT110I CYCGRG 1 cut(s) 1055
BmgT120I GGNCC 2 cut(s) 195, 647
BmrFI CCNGG 4 cut(s) 645, 758, 949, 1398
BmsI GCATC 2 cut(s) 94, 742
BpiI GAAGAC 2 cut(s) 695, 1120
BplI GAGNNNNNCTC 4 cut(s) 221, 253, 953, 985
Bpu10I CCTNAGC 1 cut(s) 336
BpuEI CTTGAG 3 cut(s) 491, 764, 785
BpuMI CCSGG 2 cut(s) 758, 949
BsaBI GATNNNNATC 2 cut(s) 36, 639
BsaJI CCNNGG 1 cut(s) 756
Bsc4I CCNNNNNNNGG 3 cut(s) 524, 594, 1117
Bse1I ACTGG 4 cut(s) 711, 1034, 1183, 1235
Bse3DI GCAATG 1 cut(s) 1321
Bse8I GATNNNNATC 2 cut(s) 36, 639
BseBI CCWGG 2 cut(s) 645, 1398
BseDI CCNNGG 1 cut(s) 756
BseGI GGATG 3 cut(s) 24, 856, 1102
BseJI GATNNNNATC 2 cut(s) 36, 639
BseLI CCNNNNNNNGG 3 cut(s) 524, 594, 1117
BseMI GCAATG 1 cut(s) 1321
BseMII CTCAG 5 cut(s) 42, 327, 894, 992, 1140
BseNI ACTGG 4 cut(s) 711, 1034, 1183, 1235
BseRI GAGGAG 2 cut(s) 226, 1175
BseXI GCAGC 1 cut(s) 926
Bsh1236I CGCG 1 cut(s) 590
BshFI GGCC 1 cut(s) 197
BsiHKCI CYCGRG 1 cut(s) 1055
BsiSI CCGG 2 cut(s) 758, 948
BslI CCNNNNNNNGG 3 cut(s) 524, 594, 1117
BsmAI GTCTC 2 cut(s) 15, 945
BsnI GGCC 1 cut(s) 197
BsoBI CYCGRG 1 cut(s) 1055
Bsp1407I TGTACA 1 cut(s) 874
BspACI CCGC 3 cut(s) 16, 588, 1020
BspANI GGCC 1 cut(s) 197
BspCNI CTCAG 5 cut(s) 41, 328, 895, 993, 1141
BspFNI CGCG 1 cut(s) 590
BspMI ACCTGC 1 cut(s) 170
BspPI GGATC 6 cut(s) 95, 635, 669, 768, 1093, 1139
BsrDI GCAATG 1 cut(s) 1321
BsrGI TGTACA 1 cut(s) 874
BsrI ACTGG 4 cut(s) 711, 1034, 1183, 1235
BssECI CCNNGG 1 cut(s) 756
BssSI CACGAG 1 cut(s) 348
Bst2BI CACGAG 1 cut(s) 348
Bst2UI CCWGG 2 cut(s) 645, 1398
Bst4CI ACNGT 1 cut(s) 1259
Bst6I CTCTTC 3 cut(s) 222, 244, 1152
BstAUI TGTACA 1 cut(s) 874
BstC8I GCNNGC 2 cut(s) 967, 978
BstDEI CTNAG 7 cut(s) 28, 336, 446, 903, 1001, 1149, 1461
BstENI CCTNNNNNAGG 1 cut(s) 522
BstF5I GGATG 3 cut(s) 24, 856, 1102
BstFNI CGCG 1 cut(s) 590
BstMAI GTCTC 2 cut(s) 15, 945
BstMWI GCNNNNNNNGC 1 cut(s) 546
BstNI CCWGG 2 cut(s) 645, 1398
BstSCI CCNGG 4 cut(s) 643, 756, 947, 1396
BstSFI CTRYAG 1 cut(s) 630
BstUI CGCG 1 cut(s) 590
BstV1I GCAGC 1 cut(s) 926
BstV2I GAAGAC 2 cut(s) 695, 1120
BstX2I RGATCY 4 cut(s) 640, 661, 760, 1098
BstYI RGATCY 4 cut(s) 640, 661, 760, 1098
BsuI GTATCC 1 cut(s) 808
BsuRI GGCC 1 cut(s) 197
BtgZI GCGATG 2 cut(s) 443, 605
BtsCI GGATG 3 cut(s) 24, 856, 1102
BtsI GCAGTG 1 cut(s) 369
BtsIMutI CAGTG 2 cut(s) 369, 1027
BveI ACCTGC 1 cut(s) 170
Cac8I GCNNGC 2 cut(s) 967, 978
CaiI CAGNNNCTG 1 cut(s) 107
Cfr13I GGNCC 2 cut(s) 195, 647
Csp6I GTAC 2 cut(s) 875, 1213
CviQI GTAC 2 cut(s) 875, 1213
DdeI CTNAG 7 cut(s) 28, 336, 446, 903, 1001, 1149, 1461
Eam1104I CTCTTC 3 cut(s) 222, 244, 1152
EarI CTCTTC 3 cut(s) 222, 244, 1152
Eco32I GATATC 2 cut(s) 1322, 1426
Eco47I GGWCC 1 cut(s) 647
Eco57I CTGAAG 1 cut(s) 563
Eco88I CYCGRG 1 cut(s) 1055
EcoNI CCTNNNNNAGG 1 cut(s) 522
EcoRII CCWGG 2 cut(s) 643, 1396
EcoRV GATATC 2 cut(s) 1322, 1426
EcoT22I ATGCAT 1 cut(s) 729
FauNDI CATATG 1 cut(s) 191
FbaI TGATCA 1 cut(s) 993
Fnu4HI GCNGC 2 cut(s) 915, 1021
FokI GGATG 3 cut(s) 31, 843, 1089
Fsp4HI GCNGC 2 cut(s) 915, 1021
FspBI CTAG 4 cut(s) 398, 827, 1073, 1325
GluI GCNGC 2 cut(s) 915, 1021
HaeIII GGCC 1 cut(s) 197
HapII CCGG 2 cut(s) 758, 948
HinfI GANTC 3 cut(s) 884, 1234, 1296
HpaII CCGG 2 cut(s) 758, 948
HphI GGTGA 4 cut(s) 89, 1056, 1144, 1177
Hpy166II GTNNAC 2 cut(s) 422, 1215
Hpy188I TCNGA 2 cut(s) 31, 65
Hpy188III TCNNGA 7 cut(s) 680, 764, 1057, 1073, 1148, 1325, 1409
Hpy8I GTNNAC 2 cut(s) 422, 1215
HpyAV CCTTC 2 cut(s) 178, 268
HpyCH4III ACNGT 1 cut(s) 1259
HpyCH4V TGCA 6 cut(s) 165, 462, 727, 980, 1314, 1403
HpyF10VI GCNNNNNNNGC 1 cut(s) 546
HpyF3I CTNAG 7 cut(s) 28, 336, 446, 903, 1001, 1149, 1461
Ksp22I TGATCA 1 cut(s) 993
LmnI GCTCC 1 cut(s) 682
Lsp1109I GCAGC 1 cut(s) 926
LweI GCATC 2 cut(s) 94, 742
MaeI CTAG 4 cut(s) 398, 827, 1073, 1325
MaeIII GTNAC 3 cut(s) 116, 454, 1204
MflI RGATCY 4 cut(s) 640, 661, 760, 1098
MluCI AATT 9 cut(s) 95, 580, 683, 704, 799, 918, 988, 1337, 1479
MlyI GAGTC 1 cut(s) 878
MmeI TCCRAC 3 cut(s) 161, 341, 1130
Mph1103I ATGCAT 1 cut(s) 729
MroXI GAANNNNTTC 1 cut(s) 548
MseI TTAA 5 cut(s) 695, 843, 930, 1274, 1355
MslI CAYNNNNRTG 4 cut(s) 526, 590, 861, 1220
MspI CCGG 2 cut(s) 758, 948
MspR9I CCNGG 4 cut(s) 645, 758, 949, 1398
MvaI CCWGG 2 cut(s) 645, 1398
MvnI CGCG 1 cut(s) 590
MwoI GCNNNNNNNGC 1 cut(s) 546
NciI CCSGG 2 cut(s) 758, 949
NdeI CATATG 1 cut(s) 191
NmuCI GTSAC 2 cut(s) 116, 454
NsiI ATGCAT 1 cut(s) 729
OliI CACNNNNGTG 1 cut(s) 1220
PaeR7I CTCGAG 1 cut(s) 1055
PdmI GAANNNNTTC 1 cut(s) 548
PfeI GAWTC 2 cut(s) 1234, 1296
PfoI TCCNGGA 2 cut(s) 643, 947
PkrI GCNGC 2 cut(s) 916, 1022
PleI GAGTC 1 cut(s) 878
PpsI GAGTC 1 cut(s) 878
Psp6I CCWGG 2 cut(s) 643, 1396
PspGI CCWGG 2 cut(s) 643, 1396
PspPI GGNCC 2 cut(s) 195, 647
PstNI CAGNNNCTG 1 cut(s) 107
PsuI RGATCY 4 cut(s) 640, 661, 760, 1098
RsaI GTAC 2 cut(s) 876, 1214
RsaNI GTAC 2 cut(s) 875, 1213
RseI CAYNNNNRTG 4 cut(s) 526, 590, 861, 1220
SaqAI TTAA 5 cut(s) 695, 843, 930, 1274, 1355
SatI GCNGC 2 cut(s) 915, 1021
Sau96I GGNCC 2 cut(s) 195, 647
SchI GAGTC 1 cut(s) 878
ScrFI CCNGG 4 cut(s) 645, 758, 949, 1398
SfaNI GCATC 2 cut(s) 94, 742
SfcI CTRYAG 1 cut(s) 630
Sfr274I CTCGAG 1 cut(s) 1055
SinI GGWCC 1 cut(s) 647
SlaI CTCGAG 1 cut(s) 1055
SmiMI CAYNNNNRTG 4 cut(s) 526, 590, 861, 1220
SmlI CTYRAG 4 cut(s) 470, 764, 779, 1055
SmoI CTYRAG 4 cut(s) 470, 764, 779, 1055
SpeI ACTAGT 1 cut(s) 397
Sse9I AATT 9 cut(s) 95, 580, 683, 704, 799, 918, 988, 1337, 1479
SsiI CCGC 3 cut(s) 16, 588, 1020
SspI AATATT 1 cut(s) 742
SspMI CTAG 4 cut(s) 398, 827, 1073, 1325
StyD4I CCNGG 4 cut(s) 643, 756, 947, 1396
TaaI ACNGT 1 cut(s) 1259
TaqI TCGA 3 cut(s) 1056, 1366, 1408
TasI AATT 9 cut(s) 95, 580, 683, 704, 799, 918, 988, 1337, 1479
TatI WGTACW 2 cut(s) 874, 1212
TauI GCSGC 1 cut(s) 1023
TfiI GAWTC 2 cut(s) 1234, 1296
Tru1I TTAA 5 cut(s) 695, 843, 930, 1274, 1355
Tru9I TTAA 5 cut(s) 695, 843, 930, 1274, 1355
TscAI CASTG 2 cut(s) 376, 1034
TseFI GTSAC 2 cut(s) 116, 454
TseI GCWGC 1 cut(s) 914
Tsp45I GTSAC 2 cut(s) 116, 454
TspDTI ATGAA 9 cut(s) 17, 240, 241, 279, 305, 879, 1001, 1061, 1200
TspGWI ACGGA 2 cut(s) 209, 827
TspRI CASTG 2 cut(s) 376, 1034
VpaK11BI GGWCC 1 cut(s) 647
XagI CCTNNNNNAGG 1 cut(s) 522
XapI RAATTY 2 cut(s) 704, 799
XbaI TCTAGA 2 cut(s) 1072, 1324
XhoI CTCGAG 1 cut(s) 1055
XmnI GAANNNNTTC 1 cut(s) 548
XspI CTAG 4 cut(s) 398, 827, 1073, 1325
Zsp2I ATGCAT 1 cut(s) 729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.