MD11G1266800.v1.1

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000062
Physical Location & Seq
Forward (+)
38196224 .. 38199026
2803 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1266800.v1.1.491

Sequence Viewer

Length: 1365 bp
ATGCTCTCCATGGGTAGAGATAAGATTAGTGAATTGCCGGATGAAGTTCTTTGTCACATACTCTCCTTCGTTCCAGCAAAATATGTTGTGAGGACCCGTGTTCTGTCTACTAGATGGAAGAACATATGGGCTTCTGTCCCCAGTCTTGACTTCGAATTTGAAAACATACCTATTGTATGGAGAGACGAAAATCAGCCTGACCCCGATGGTTTCAGATGGGAAGCCGAAGATCTGTCTGACCATGTTGGATTTTTGACGTTTGTTGATCGTGTTCTCTACTTTCGTGGCTTATCAGATATTAAAAAATTACGTCTTCATTGTTACTGTCGTGTTGAGGATGCCTCTCGTATTGATGGCTGGATTCGCTCTGCCTTTAGCCATAATGTTGTTGAACTTGATCTCTGTGTTCAAGCACATTATGATGAGTATATTGAGGAACCGCCTTTGGAGTTGCCTCGATGCGTATTCACTTGCAAAACGCTAGTGGTTTTGAAACTGATGTCAAATTTTATTACCTATGCTCCCCCTACATCAGGCTGTTGTTTCCCAAGTCTGAAGTCCCTTGATGTCAGAGTTGATTATCCTGAAGATGACTCAATGGAAAAACTTTTTTCATGCTGCCCTGTACTTGAAGATTTATCTATAAAGGCAACTGTTCCAGATCATAATCGTCAGAATTTTAAGGTCTCAGCGCCTGAGCTCAAGAGATTAAGAATGACTTTCTTCAGTTTTATCAATGGTGCTGAAGATTTTGAGTACAATATATCTGTGAATGCTCCAAAGCTTGAATACCTTGACATTAAGCAGGACTATTTGTCACATTATACATTTGAGAATCTAAAATCCCTGGCCAAAGGCAGTGTTGATCTCTATTGCCATATTGGGAAAACCCAGGTTGGCTTCTCTGAACGAGCAACTGCTCTTCTGGAGGCATTTTCCAACGTTAAATATCTGTTGATTTCAGCTCATTATGTCGAGGATGGTTGTCTGCCTGCTTTCAATCATTTGACCGAATTGAAGTTGGTTCTTTATGATTGCTATCACTGGGATTTGCTAACAGAGTTGCTCAAGAAATCACCAAATTTGCAATCTCTTGTCATCGAACATAAAGAAGACAAGGAATGTGTTGAGGAGCGTGGAGATGTCTTAAATTCGGCAGATAGATGGCGTACACCAGAGTCTGTGCCCATTTGTCTGATATCGCACCTGAAGACCATCACTATAAGGGGCTTAAATCTATACCCGCATGTGCAGAAAGTGCTAAAATATTTTATGAAGAACGGTAAAGTTTTGGACAAGATGACCATCTATGCTAAGAATGGGGCTTACAAATATTTCATACCTAGAAGGGCTCCTAGGACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

455

Amino Acids

52.62

Weight (kDa)

6.09

Isoelectric Point (pI)

46.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 9 - 48 7.4e-11 F-box domain
LRR_At1g61320_AtMIF1 PF23622 99 - 436 2.4e-10 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 117 - 273 1e-15 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 392 - 436 3.7e-12 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 107
AciI CCGC 2 cut(s) 440, 1244
AclI AACGTT 1 cut(s) 942
AcoI YGGCCR 1 cut(s) 849
AcsI RAATTY 5 cut(s) 155, 505, 676, 1081, 1150
AcuI CTGAAG 5 cut(s) 575, 606, 709, 765, 1229
AfaI GTAC 3 cut(s) 627, 758, 1171
AfiI CCNNNNNNNGG 1 cut(s) 533
AgsI TTSAA 8 cut(s) 161, 392, 410, 493, 632, 788, 1000, 1018
AhdI GACNNNNNGTC 1 cut(s) 814
AjnI CCWGG 2 cut(s) 846, 891
AluBI AGCT 3 cut(s) 700, 784, 965
AluI AGCT 3 cut(s) 700, 784, 965
Alw21I GWGCWC 1 cut(s) 702
Alw26I GTCTC 2 cut(s) 177, 691
AlwNI CAGNNNCTG 2 cut(s) 695, 1181
AoxI GGCC 1 cut(s) 849
ApeKI GCWGC 1 cut(s) 618
ApoI RAATTY 5 cut(s) 155, 505, 676, 1081, 1150
ArsI GACNNNNNNTTYG 2 cut(s) 140, 172
AspA2I CCTAGG 1 cut(s) 1355
AspLEI GCGC 1 cut(s) 694
AspS9I GGNCC 1 cut(s) 93
AsuHPI GGTGA 1 cut(s) 1068
AsuII TTCGAA 1 cut(s) 153
AvaII GGWCC 1 cut(s) 93
AvrII CCTAGG 1 cut(s) 1355
BaeGI GKGCMC 1 cut(s) 1188
BalI TGGCCA 1 cut(s) 851
BanII GRGCYC 2 cut(s) 702, 1354
BbsI GAAGAC 3 cut(s) 305, 1119, 1217
Bbv12I GWGCWC 1 cut(s) 702
BbvI GCAGC 1 cut(s) 605
BccI CCATC 8 cut(s) 108, 200, 210, 347, 974, 1158, 1223, 1313
BciT130I CCWGG 2 cut(s) 848, 893
BcoDI GTCTC 2 cut(s) 177, 691
BfaI CTAG 4 cut(s) 111, 482, 1344, 1356
BfoI RGCGCY 1 cut(s) 695
BglII AGATCT 1 cut(s) 229
BisI GCNGC 1 cut(s) 619
BlnI CCTAGG 1 cut(s) 1355
BlsI GCNGC 1 cut(s) 620
Bme1390I CCNGG 2 cut(s) 848, 893
Bme18I GGWCC 1 cut(s) 93
BmeRI GACNNNNNGTC 1 cut(s) 814
BmgT120I GGNCC 1 cut(s) 93
BmiI GGNNCC 3 cut(s) 95, 438, 1353
BmrFI CCNGG 2 cut(s) 848, 893
BmrI ACTGGG 2 cut(s) 135, 1054
BmsI GCATC 2 cut(s) 328, 449
BmuI ACTGGG 2 cut(s) 135, 1054
BpiI GAAGAC 3 cut(s) 305, 1119, 1217
BplI GAGNNNNNCTC 2 cut(s) 326, 358
BpmI CTGGAG 1 cut(s) 947
Bpu10I CCTNAGC 1 cut(s) 696
Bpu14I TTCGAA 1 cut(s) 153
BpuEI CTTGAG 2 cut(s) 686, 1052
BsaBI GATNNNNATC 3 cut(s) 666, 1038, 1304
BsaI GGTCTC 1 cut(s) 691
BsaJI CCNNGG 4 cut(s) 9, 846, 891, 1355
BsaXI ACNNNNNCTCC 4 cut(s) 47, 77, 505, 535
Bsc4I CCNNNNNNNGG 1 cut(s) 533
Bse1I ACTGG 2 cut(s) 141, 1049
Bse8I GATNNNNATC 3 cut(s) 666, 1038, 1304
BseBI CCWGG 2 cut(s) 848, 893
BseDI CCNNGG 4 cut(s) 9, 846, 891, 1355
BseGI GGATG 3 cut(s) 46, 343, 985
BseJI GATNNNNATC 3 cut(s) 666, 1038, 1304
BseLI CCNNNNNNNGG 1 cut(s) 533
BseMII CTCAG 2 cut(s) 687, 702
BseNI ACTGG 2 cut(s) 141, 1049
BseRI GAGGAG 1 cut(s) 1145
BseSI GKGCMC 1 cut(s) 1188
BseXI GCAGC 1 cut(s) 605
BsgI GTGCAG 1 cut(s) 1271
BshFI GGCC 1 cut(s) 851
BsiHKAI GWGCWC 1 cut(s) 702
BsiSI CCGG 1 cut(s) 38
BslFI GGGAC 2 cut(s) 122, 544
BslI CCNNNNNNNGG 1 cut(s) 533
BsmAI GTCTC 2 cut(s) 177, 691
BsmBI CGTCTC 1 cut(s) 177
BsmFI GGGAC 2 cut(s) 122, 544
BsmI GAATGC 1 cut(s) 778
BsnI GGCC 1 cut(s) 851
Bso31I GGTCTC 1 cut(s) 691
Bsp119I TTCGAA 1 cut(s) 153
Bsp1286I GDGCHC 3 cut(s) 702, 1188, 1354
Bsp143I GATC 5 cut(s) 229, 265, 397, 661, 865
Bsp19I CCATGG 1 cut(s) 9
BspACI CCGC 2 cut(s) 440, 1244
BspANI GGCC 1 cut(s) 851
BspCNI CTCAG 2 cut(s) 688, 701
BspLI GGNNCC 3 cut(s) 95, 438, 1353
BspQI GCTCTTC 1 cut(s) 927
BspT104I TTCGAA 1 cut(s) 153
BspTNI GGTCTC 1 cut(s) 691
BsrI ACTGG 2 cut(s) 141, 1049
BssECI CCNNGG 4 cut(s) 9, 846, 891, 1355
BssMI GATC 5 cut(s) 229, 265, 397, 661, 865
BssT1I CCWWGG 2 cut(s) 9, 1355
Bst2UI CCWGG 2 cut(s) 848, 893
Bst4CI ACNGT 3 cut(s) 326, 655, 1283
Bst6I CTCTTC 1 cut(s) 927
BstAPI GCANNNNNTGC 1 cut(s) 1258
BstBI TTCGAA 1 cut(s) 153
BstC8I GCNNGC 1 cut(s) 993
BstDEI CTNAG 3 cut(s) 688, 696, 1314
BstDSI CCRYGG 1 cut(s) 9
BstENI CCTNNNNNAGG 1 cut(s) 531
BstF5I GGATG 3 cut(s) 46, 343, 985
BstH2I RGCGCY 1 cut(s) 695
BstHHI GCGC 1 cut(s) 694
BstKTI GATC 5 cut(s) 232, 268, 400, 664, 868
BstMAI GTCTC 2 cut(s) 177, 691
BstMBI GATC 5 cut(s) 229, 265, 397, 661, 865
BstMWI GCNNNNNNNGC 2 cut(s) 363, 1258
BstNI CCWGG 2 cut(s) 848, 893
BstNSI RCATGY 1 cut(s) 1250
BstSCI CCNGG 2 cut(s) 846, 891
BstSLI GKGCMC 1 cut(s) 1188
BstV1I GCAGC 1 cut(s) 605
BstV2I GAAGAC 3 cut(s) 305, 1119, 1217
BstX2I RGATCY 1 cut(s) 229
BstYI RGATCY 1 cut(s) 229
BsuRI GGCC 1 cut(s) 851
BtgI CCRYGG 1 cut(s) 9
BtsCI GGATG 3 cut(s) 46, 343, 985
BtsI GCAGTG 1 cut(s) 865
BtsIMutI CAGTG 2 cut(s) 865, 1042
Cac8I GCNNGC 1 cut(s) 993
CaiI CAGNNNCTG 2 cut(s) 695, 1181
CfoI GCGC 1 cut(s) 694
Cfr13I GGNCC 1 cut(s) 93
Csp6I GTAC 3 cut(s) 626, 757, 1170
CviAII CATG 4 cut(s) 10, 242, 615, 1247
CviQI GTAC 3 cut(s) 626, 757, 1170
DdeI CTNAG 3 cut(s) 688, 696, 1314
DpnI GATC 5 cut(s) 231, 267, 399, 663, 867
DpnII GATC 5 cut(s) 229, 265, 397, 661, 865
DriI GACNNNNNGTC 1 cut(s) 814
EaeI YGGCCR 1 cut(s) 849
Eam1104I CTCTTC 1 cut(s) 927
Eam1105I GACNNNNNGTC 1 cut(s) 814
EarI CTCTTC 1 cut(s) 927
Ecl136II GAGCTC 1 cut(s) 700
Eco130I CCWWGG 2 cut(s) 9, 1355
Eco24I GRGCYC 2 cut(s) 702, 1354
Eco31I GGTCTC 1 cut(s) 691
Eco32I GATATC 1 cut(s) 1200
Eco47I GGWCC 1 cut(s) 93
Eco53kI GAGCTC 1 cut(s) 700
Eco57I CTGAAG 5 cut(s) 575, 606, 709, 765, 1229
EcoICRI GAGCTC 1 cut(s) 700
EcoNI CCTNNNNNAGG 1 cut(s) 531
EcoO109I RGGNCCY 1 cut(s) 93
EcoRII CCWGG 2 cut(s) 846, 891
EcoRV GATATC 1 cut(s) 1200
EcoT14I CCWWGG 2 cut(s) 9, 1355
EcoT38I GRGCYC 2 cut(s) 702, 1354
ErhI CCWWGG 2 cut(s) 9, 1355
Esp3I CGTCTC 1 cut(s) 177
FaeI CATG 4 cut(s) 13, 245, 618, 1250
FalI AAGNNNNNCTT 2 cut(s) 703, 735
FaqI GGGAC 2 cut(s) 122, 544
FatI CATG 4 cut(s) 9, 241, 614, 1246
FauI CCCGC 1 cut(s) 1251
FauNDI CATATG 1 cut(s) 125
FblI GTMKAC 1 cut(s) 107
Fnu4HI GCNGC 1 cut(s) 619
FokI GGATG 3 cut(s) 53, 350, 992
FriOI GRGCYC 2 cut(s) 702, 1354
Fsp4HI GCNGC 1 cut(s) 619
FspBI CTAG 4 cut(s) 111, 482, 1344, 1356
GlaI GCGC 1 cut(s) 693
GluI GCNGC 1 cut(s) 619
GsuI CTGGAG 1 cut(s) 947
HaeII RGCGCY 1 cut(s) 695
HaeIII GGCC 1 cut(s) 851
HapII CCGG 1 cut(s) 38
HhaI GCGC 1 cut(s) 694
Hin1II CATG 4 cut(s) 13, 245, 618, 1250
Hin6I GCGC 1 cut(s) 692
HinP1I GCGC 1 cut(s) 692
HindIII AAGCTT 1 cut(s) 782
HinfI GANTC 4 cut(s) 361, 593, 835, 1178
HpaII CCGG 1 cut(s) 38
HphI GGTGA 1 cut(s) 1068
Hpy166II GTNNAC 2 cut(s) 108, 1172
Hpy188I TCNGA 8 cut(s) 215, 238, 295, 555, 572, 675, 907, 1197
Hpy188III TCNNGA 6 cut(s) 146, 584, 659, 703, 926, 1069
Hpy8I GTNNAC 2 cut(s) 108, 1172
HpyAV CCTTC 2 cut(s) 76, 1341
HpyCH4III ACNGT 3 cut(s) 326, 655, 1283
HpyCH4IV ACGT 3 cut(s) 257, 310, 942
HpyCH4V TGCA 3 cut(s) 474, 1087, 1252
HpyF10VI GCNNNNNNNGC 2 cut(s) 363, 1258
HpyF3I CTNAG 3 cut(s) 688, 696, 1314
HpySE526I ACGT 3 cut(s) 257, 310, 942
Hsp92II CATG 4 cut(s) 13, 245, 618, 1250
HspAI GCGC 1 cut(s) 692
Kzo9I GATC 5 cut(s) 229, 265, 397, 661, 865
LguI GCTCTTC 1 cut(s) 927
LmnI GCTCC 4 cut(s) 526, 781, 1132, 1357
Lsp1109I GCAGC 1 cut(s) 605
LweI GCATC 2 cut(s) 328, 449
MaeI CTAG 4 cut(s) 111, 482, 1344, 1356
MaeII ACGT 3 cut(s) 257, 310, 942
MaeIII GTNAC 3 cut(s) 53, 320, 816
MalI GATC 5 cut(s) 231, 267, 399, 663, 867
MboI GATC 5 cut(s) 229, 265, 397, 661, 865
MflI RGATCY 1 cut(s) 229
MhlI GDGCHC 3 cut(s) 702, 1188, 1354
MlsI TGGCCA 1 cut(s) 851
MluCI AATT 8 cut(s) 32, 155, 305, 505, 676, 1013, 1081, 1150
MluNI TGGCCA 1 cut(s) 851
MlyI GAGTC 2 cut(s) 587, 1187
MmeI TCCRAC 2 cut(s) 226, 963
MnlI CCTC 8 cut(s) 84, 328, 352, 427, 465, 922, 970, 1123
Mox20I TGGCCA 1 cut(s) 851
MscI TGGCCA 1 cut(s) 851
MseI TTAA 7 cut(s) 300, 681, 710, 801, 945, 1148, 1232
MslI CAYNNNNRTG 1 cut(s) 420
Msp20I TGGCCA 1 cut(s) 851
MspI CCGG 1 cut(s) 38
MspR9I CCNGG 2 cut(s) 848, 893
Mva1269I GAATGC 1 cut(s) 778
MvaI CCWGG 2 cut(s) 848, 893
MwoI GCNNNNNNNGC 2 cut(s) 363, 1258
NcoI CCATGG 1 cut(s) 9
NdeI CATATG 1 cut(s) 125
NdeII GATC 5 cut(s) 229, 265, 397, 661, 865
NlaIII CATG 4 cut(s) 13, 245, 618, 1250
NlaIV GGNNCC 3 cut(s) 95, 438, 1353
NmuCI GTSAC 2 cut(s) 53, 816
NspI RCATGY 1 cut(s) 1250
NspV TTCGAA 1 cut(s) 153
PciSI GCTCTTC 1 cut(s) 927
PctI GAATGC 1 cut(s) 778
PfeI GAWTC 2 cut(s) 361, 835
PkrI GCNGC 1 cut(s) 620
PleI GAGTC 2 cut(s) 587, 1186
PpsI GAGTC 2 cut(s) 587, 1186
PpuMI RGGWCCY 1 cut(s) 93
Psp124BI GAGCTC 1 cut(s) 702
Psp1406I AACGTT 1 cut(s) 942
Psp5II RGGWCCY 1 cut(s) 93
Psp6I CCWGG 2 cut(s) 846, 891
PspGI CCWGG 2 cut(s) 846, 891
PspN4I GGNNCC 3 cut(s) 95, 438, 1353
PspPI GGNCC 1 cut(s) 93
PspPPI RGGWCCY 1 cut(s) 93
PstNI CAGNNNCTG 2 cut(s) 695, 1181
PsuI RGATCY 1 cut(s) 229
RsaI GTAC 3 cut(s) 627, 758, 1171
RsaNI GTAC 3 cut(s) 626, 757, 1170
RseI CAYNNNNRTG 1 cut(s) 420
SacI GAGCTC 1 cut(s) 702
SapI GCTCTTC 1 cut(s) 927
SaqAI TTAA 7 cut(s) 300, 681, 710, 801, 945, 1148, 1232
SatI GCNGC 1 cut(s) 619
Sau3AI GATC 5 cut(s) 229, 265, 397, 661, 865
Sau96I GGNCC 1 cut(s) 93
SchI GAGTC 2 cut(s) 587, 1187
ScrFI CCNGG 2 cut(s) 848, 893
SduI GDGCHC 3 cut(s) 702, 1188, 1354
SfaNI GCATC 2 cut(s) 328, 449
SfuI TTCGAA 1 cut(s) 153
SinI GGWCC 1 cut(s) 93
SmiMI CAYNNNNRTG 1 cut(s) 420
SmlI CTYRAG 2 cut(s) 701, 1067
SmoI CTYRAG 2 cut(s) 701, 1067
Sse9I AATT 8 cut(s) 32, 155, 305, 505, 676, 1013, 1081, 1150
SsiI CCGC 2 cut(s) 440, 1244
SspI AATATT 2 cut(s) 1268, 1334
SspMI CTAG 4 cut(s) 111, 482, 1344, 1356
SstI GAGCTC 1 cut(s) 702
StyD4I CCNGG 2 cut(s) 846, 891
StyI CCWWGG 2 cut(s) 9, 1355
TaaI ACNGT 3 cut(s) 326, 655, 1283
TaiI ACGT 3 cut(s) 260, 313, 945
TaqI TCGA 4 cut(s) 153, 457, 975, 1101
TaqII GACCGA 1 cut(s) 1025
TasI AATT 8 cut(s) 32, 155, 305, 505, 676, 1013, 1081, 1150
TatI WGTACW 2 cut(s) 625, 756
TfiI GAWTC 2 cut(s) 361, 835
Tru1I TTAA 7 cut(s) 300, 681, 710, 801, 945, 1148, 1232
Tru9I TTAA 7 cut(s) 300, 681, 710, 801, 945, 1148, 1232
TscAI CASTG 2 cut(s) 865, 1049
TseFI GTSAC 2 cut(s) 53, 816
TseI GCWGC 1 cut(s) 618
Tsp45I GTSAC 2 cut(s) 53, 816
TspDTI ATGAA 5 cut(s) 57, 305, 603, 1289, 1327
TspRI CASTG 2 cut(s) 865, 1049
VpaK11BI GGWCC 1 cut(s) 93
XagI CCTNNNNNAGG 1 cut(s) 531
XapI RAATTY 5 cut(s) 155, 505, 676, 1081, 1150
XceI RCATGY 1 cut(s) 1250
XmaJI CCTAGG 1 cut(s) 1355
XmiI GTMKAC 1 cut(s) 107
XspI CTAG 4 cut(s) 111, 482, 1344, 1356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.