Rorug05G0107700

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000062
Physical Location & Seq
Forward (+)
9544565 .. 9548318
3754 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0107700.1

Sequence Viewer

Length: 1824 bp
ATGGCTACTCCTTCGAATAGTTGGGCTCACACAGCCCAAATACAACACCACCTTTCTTCTCCCTCCTCCTCTTTTTCTTCACTAGTAAACATGGGCTTCCCGACAAGATCCATCGCCTTGAACAGAAACAGAACCAGCACCATTCACTCAGCTCTCCAGTCTCCTTCAGTTCTTCACTTCCCAAAACAGCCCTACCATCCGCGAGTAATTAACAAAGAGGCCACTATAACACCTTCTCCAAAGCCTAAAACGGTAACTACAACGCAGCAACCTCCACACTGGAATTTGCTTCAGAGAGCTGCCTCCACCGCCTTGGACATGTTGGAAGGTGCTTTGGTCTCGCGTGAGAGCCAAAACCCTCTCCCCAAAACCGCCGACCCACGTGTCCAAATCGCCGGGAACTTCGCTCCGGTGCCGGAGCAACCCGTCCGTCACTCATTGCCAGTATCCGGGACCATACCCGAATGCATTAGCGGCGTCTACGTCCGTAACGGCGCGAACCCCTTACACGAGCCGGTCGCCGGCCACCACTTCTTCGACGGTGACGGCATGGTCCACGCCGTCAGCATAAATGACGGAGCCGCCAGCTACGCATGTCGGTTCACTGAAACCCAAAGACTGGTCCAGGAGCGGGAAATCGGGCGACCCGTTTTCCCAAAAGCCATAGGCGAGCTCCACGGCCACTCCGGCATCGCCCGCCTCGCCTTGTTTTACGCGCGCGGCGCTTTGGGCCTCGTGGACCCCAGCCACGGCATCGGAGTCGCCAACGCCGGCTTAGTCTACTTCAACGACCGCCTCTTGGCCATGTCCGAGGACGACATGCCGTACCAAGTGCGGATCACTCCCTCCGGCGACCTCGAAACAGTGGGCCGCTACGACTTCGAAACCCAACTCGGGTCCACAATGATCGCCCACCCGAAAGTCGACCCGGTGTCCGGCCACCTCCACACGCTCAGCTACGACGTCGTGAAGAGGCCTTACCTGAAATACTTCCAATTCTCCGCCGACGGGGAGAAGTCTCCGGACGTGGAAATCCCTCTGGCGGAGCCCACAATGATGCACGACTTCGCCATCACCGAAAACTTCGTCGTGATTCCCGACCAGCAGGTGGTGTTCAAGCTGCAGGAGATGATCACCGGCGGGTCGCCGGTGATCTACGACAAGAACAAGAAATCCAGGTTCGGAATTCTGGCGAAAAATGCCACAAACGCTGATGATATAATTTGGGTTGAATGCCCGGACACTTTCTGCTTCCACTTGTGGAATGCGTGGGAGGAGCCTGAGTCCGATGAGGTGGTTGTGATCGGGTCATGCATGACTCCACCGGACTCGATATTTAATGAGAATGACGAGTGCTTGAAGAGTGTGTTGTCCGAAATCCGGCTCAATTTGAAAACCGGCGAGTCGACTCGGAGGCCGATTATTTCGGAGGAGTCGGAGCATGTGAACTTGGAGGCGGGAATGGTGAATCGGAACCGGCTCGGGAGAAAGACTCGGTATGCTTATCTCGCCATTGCTGAACCGTGGCCAAAAGTTTCTGGTTTCGCCAAGGTGGATCTTTTTACTGGGGAAGTAAAAAAGCATATTTACGGAGACAGGAAGTTTGGTGGTGAGCCCTTCTTTCTTCCTTCGGGTTCACGTGGGGAAGAAGATGGTGGGTATATTCTGAGCTTTGTTCACGACGAGAAGACGTGGAAGTCGGAGCTTCAGATTGTGAATGCCATGAATTTGAAGCTGGAAGCCACTGTGACGCTACCGTCAAGAGTTCCGTATGGATTTCACGGCACGTTCATAGACTCGAAGGACTTGAAAAACCAGGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

607

Amino Acids

67.2

Weight (kDa)

6.12

Isoelectric Point (pI)

46.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPE65 PF03055 135 - 599 2.7e-129 Retinal pigment epithelial membrane protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1096
AasI GACNNNNNNGTC 4 cut(s) 383, 551, 1696, 1756
AatII GACGTC 1 cut(s) 966
Acc36I ACCTGC 1 cut(s) 1096
AccB1I GGYRCC 1 cut(s) 412
AccB7I CCANNNNNTGG 2 cut(s) 619, 1108
AccBSI CCGCTC 1 cut(s) 631
AccI GTMKAC 4 cut(s) 480, 780, 924, 1406
AccII CGCG 6 cut(s) 202, 343, 497, 716, 718, 720
AccIII TCCGGA 1 cut(s) 1021
AclWI GGATC 3 cut(s) 102, 845, 1563
AcoI YGGCCR 5 cut(s) 523, 679, 801, 937, 1526
AcsI RAATTY 3 cut(s) 283, 1185, 1726
AcuI CTGAAG 3 cut(s) 150, 275, 1691
AcvI CACGTG 2 cut(s) 383, 1640
AcyI GRCGYC 2 cut(s) 477, 963
AfaI GTAC 1 cut(s) 827
AflIII ACRYGT 2 cut(s) 318, 382
AgsI TTSAA 8 cut(s) 121, 787, 1117, 1232, 1360, 1393, 1732, 1810
AhdI GACNNNNNGTC 1 cut(s) 931
AhlI ACTAGT 1 cut(s) 82
AjiI CACGTC 2 cut(s) 1027, 1692
AjnI CCWGG 3 cut(s) 624, 1175, 1815
AloI GAACNNNNNNTCC 2 cut(s) 1157, 1189
AluBI AGCT 9 cut(s) 152, 299, 588, 673, 957, 1120, 1671, 1705, 1735
AluI AGCT 9 cut(s) 152, 299, 588, 673, 957, 1120, 1671, 1705, 1735
Alw21I GWGCWC 1 cut(s) 675
Alw26I GTCTC 4 cut(s) 165, 343, 1023, 1587
AlwI GGATC 3 cut(s) 102, 845, 1563
Ama87I CYCGRG 2 cut(s) 893, 1481
Aor13HI TCCGGA 1 cut(s) 1021
ApeKI GCWGC 3 cut(s) 265, 299, 1120
ApoI RAATTY 3 cut(s) 283, 1185, 1726
ArsI GACNNNNNNTTYG 4 cut(s) 1071, 1103, 1586, 1618
Asp700I GAANNNNTTC 1 cut(s) 989
AspLEI GCGC 4 cut(s) 497, 718, 720, 725
AspS9I GGNCC 7 cut(s) 453, 553, 622, 730, 739, 868, 897
AsuC2I CCSGG 4 cut(s) 397, 451, 929, 1238
AsuHPI GGTGA 6 cut(s) 554, 1066, 1126, 1162, 1477, 1622
AsuII TTCGAA 2 cut(s) 14, 882
AvaI CYCGRG 2 cut(s) 893, 1481
AvaII GGWCC 5 cut(s) 453, 553, 622, 739, 897
BalI TGGCCA 2 cut(s) 803, 1528
BanI GGYRCC 1 cut(s) 412
BanII GRGCYC 4 cut(s) 28, 675, 1050, 1617
BarI GAAGNNNNNNTAC 2 cut(s) 962, 994
BauI CACGAG 2 cut(s) 509, 734
BbrPI CACGTG 2 cut(s) 383, 1640
BbsI GAAGAC 1 cut(s) 1694
Bbv12I GWGCWC 1 cut(s) 675
BbvI GCAGC 3 cut(s) 277, 286, 1107
BccI CCATC 4 cut(s) 119, 204, 1079, 1646
BceAI ACGGC 7 cut(s) 508, 545, 562, 694, 766, 808, 1798
BcgI CGANNNNNNTGC 2 cut(s) 742, 776
BciT130I CCWGG 3 cut(s) 626, 1177, 1817
BciVI GTATCC 1 cut(s) 457
BclI TGATCA 1 cut(s) 1131
BcnI CCSGG 4 cut(s) 397, 451, 929, 1238
BcoDI GTCTC 4 cut(s) 165, 343, 1023, 1587
BcuI ACTAGT 1 cut(s) 82
BfaI CTAG 1 cut(s) 83
BfmI CTRYAG 1 cut(s) 1121
BfoI RGCGCY 1 cut(s) 726
BfuAI ACCTGC 1 cut(s) 1096
BfuI GTATCC 1 cut(s) 457
BglI GCCNNNNNGGC 1 cut(s) 687
BisI GCNGC 7 cut(s) 266, 300, 475, 582, 721, 871, 1121
BlpI GCTNAGC 1 cut(s) 953
BlsI GCNGC 7 cut(s) 267, 301, 476, 583, 722, 872, 1122
Bme1390I CCNGG 7 cut(s) 397, 451, 626, 929, 1177, 1238, 1817
Bme18I GGWCC 5 cut(s) 453, 553, 622, 739, 897
BmeRI GACNNNNNGTC 1 cut(s) 931
BmeT110I CYCGRG 2 cut(s) 893, 1481
BmgBI CACGTC 2 cut(s) 1027, 1692
BmgT120I GGNCC 7 cut(s) 453, 553, 622, 730, 739, 868, 897
BmiI GGNNCC 8 cut(s) 414, 454, 580, 741, 898, 1047, 1278, 1475
BmrFI CCNGG 7 cut(s) 397, 451, 626, 929, 1177, 1238, 1817
BmrI ACTGGG 1 cut(s) 1575
BmsI GCATC 3 cut(s) 699, 762, 1047
BmuI ACTGGG 1 cut(s) 1575
BpiI GAAGAC 1 cut(s) 1694
BplI GAGNNNNNCTC 2 cut(s) 1477, 1509
BpmI CTGGAG 1 cut(s) 140
Bpu1102I GCTNAGC 1 cut(s) 953
Bpu14I TTCGAA 2 cut(s) 14, 882
BpuMI CCSGG 4 cut(s) 397, 451, 929, 1238
BsaAI YACGTR 2 cut(s) 383, 1640
BsaHI GRCGYC 2 cut(s) 477, 963
BsaI GGTCTC 1 cut(s) 343
BsaJI CCNNGG 6 cut(s) 312, 676, 748, 810, 1523, 1548
BsaWI WCCGGW 3 cut(s) 409, 1021, 1324
BsaXI ACNNNNNCTCC 6 cut(s) 220, 250, 668, 698, 1268, 1298
Bse118I RCCGGY 7 cut(s) 514, 521, 770, 1136, 1147, 1397, 1476
Bse1I ACTGG 5 cut(s) 157, 284, 443, 624, 1570
Bse3DI GCAATG 2 cut(s) 437, 1512
BseAI TCCGGA 1 cut(s) 1021
BseBI CCWGG 3 cut(s) 626, 1177, 1817
BseDI CCNNGG 6 cut(s) 312, 676, 748, 810, 1523, 1548
BseGI GGATG 1 cut(s) 196
BseMI GCAATG 2 cut(s) 437, 1512
BseMII CTCAG 4 cut(s) 162, 967, 1272, 1658
BseNI ACTGG 5 cut(s) 157, 284, 443, 624, 1570
BsePI GCGCGC 1 cut(s) 716
BseRI GAGGAG 4 cut(s) 55, 58, 1289, 1445
BseXI GCAGC 3 cut(s) 277, 286, 1107
BseYI CCCAGC 1 cut(s) 743
Bsh1236I CGCG 6 cut(s) 202, 343, 497, 716, 718, 720
Bsh1285I CGRYCG 2 cut(s) 519, 793
BshNI GGYRCC 1 cut(s) 412
BsiEI CGRYCG 2 cut(s) 519, 793
BsiHKAI GWGCWC 1 cut(s) 675
BsiHKCI CYCGRG 2 cut(s) 893, 1481
BslFI GGGAC 1 cut(s) 466
BsmAI GTCTC 4 cut(s) 165, 343, 1023, 1587
BsmFI GGGAC 1 cut(s) 466
BsmI GAATGC 4 cut(s) 470, 1238, 1270, 1723
Bso31I GGTCTC 1 cut(s) 343
BsoBI CYCGRG 2 cut(s) 893, 1481
Bsp119I TTCGAA 2 cut(s) 14, 882
Bsp1286I GDGCHC 4 cut(s) 28, 675, 1050, 1617
Bsp13I TCCGGA 1 cut(s) 1021
Bsp143I GATC 7 cut(s) 107, 837, 906, 1131, 1152, 1302, 1555
Bsp1720I GCTNAGC 1 cut(s) 953
BspCNI CTCAG 4 cut(s) 161, 966, 1273, 1659
BspEI TCCGGA 1 cut(s) 1021
BspFNI CGCG 6 cut(s) 202, 343, 497, 716, 718, 720
BspLI GGNNCC 8 cut(s) 414, 454, 580, 741, 898, 1047, 1278, 1475
BspMAI CTGCAG 1 cut(s) 1125
BspMI ACCTGC 1 cut(s) 1096
BspPI GGATC 3 cut(s) 102, 845, 1563
BspT104I TTCGAA 2 cut(s) 14, 882
BspT107I GGYRCC 1 cut(s) 412
BspTNI GGTCTC 1 cut(s) 343
BsrBI CCGCTC 1 cut(s) 631
BsrDI GCAATG 2 cut(s) 437, 1512
BsrFI RCCGGY 7 cut(s) 514, 521, 770, 1136, 1147, 1397, 1476
BsrI ACTGG 5 cut(s) 157, 284, 443, 624, 1570
BssAI RCCGGY 7 cut(s) 514, 521, 770, 1136, 1147, 1397, 1476
BssECI CCNNGG 6 cut(s) 312, 676, 748, 810, 1523, 1548
BssHII GCGCGC 1 cut(s) 716
BssMI GATC 7 cut(s) 107, 837, 906, 1131, 1152, 1302, 1555
BssNI GRCGYC 2 cut(s) 477, 963
BssSI CACGAG 2 cut(s) 509, 734
BssT1I CCWWGG 2 cut(s) 312, 1548
Bst2BI CACGAG 2 cut(s) 509, 734
Bst2UI CCWGG 3 cut(s) 626, 1177, 1817
Bst4CI ACNGT 6 cut(s) 253, 542, 865, 1524, 1747, 1758
Bst6I CTCTTC 2 cut(s) 965, 1355
BstACI GRCGYC 2 cut(s) 477, 963
BstBAI YACGTR 2 cut(s) 383, 1640
BstBI TTCGAA 2 cut(s) 14, 882
BstC8I GCNNGC 6 cut(s) 523, 586, 671, 697, 718, 772
BstDEI CTNAG 5 cut(s) 148, 775, 953, 1281, 1667
BstDSI CCRYGG 3 cut(s) 676, 748, 1523
BstF5I GGATG 1 cut(s) 196
BstFNI CGCG 6 cut(s) 202, 343, 497, 716, 718, 720
BstH2I RGCGCY 1 cut(s) 726
BstHHI GCGC 4 cut(s) 497, 718, 720, 725
BstKTI GATC 7 cut(s) 110, 840, 909, 1134, 1155, 1305, 1558
BstMAI GTCTC 4 cut(s) 165, 343, 1023, 1587
BstMBI GATC 7 cut(s) 107, 837, 906, 1131, 1152, 1302, 1555
BstMCI CGRYCG 2 cut(s) 519, 793
BstNI CCWGG 3 cut(s) 626, 1177, 1817
BstNSI RCATGY 4 cut(s) 322, 597, 823, 1445
BstSCI CCNGG 7 cut(s) 395, 449, 624, 927, 1175, 1236, 1815
BstSFI CTRYAG 1 cut(s) 1121
BstUI CGCG 6 cut(s) 202, 343, 497, 716, 718, 720
BstV1I GCAGC 3 cut(s) 277, 286, 1107
BstV2I GAAGAC 1 cut(s) 1694
BstX2I RGATCY 2 cut(s) 107, 1555
BstXI CCANNNNNNTGG 1 cut(s) 313
BstYI RGATCY 2 cut(s) 107, 1555
BsuI GTATCC 1 cut(s) 457
BtgI CCRYGG 3 cut(s) 676, 748, 1523
BtgZI GCGATG 2 cut(s) 97, 676
BtrI CACGTC 2 cut(s) 1027, 1692
BtsCI GGATG 1 cut(s) 196
BtsIMutI CAGTG 4 cut(s) 277, 603, 870, 1743
BveI ACCTGC 1 cut(s) 1096
Cac8I GCNNGC 6 cut(s) 523, 586, 671, 697, 718, 772
CfoI GCGC 4 cut(s) 497, 718, 720, 725
Cfr10I RCCGGY 7 cut(s) 514, 521, 770, 1136, 1147, 1397, 1476
Cfr13I GGNCC 7 cut(s) 453, 553, 622, 730, 739, 868, 897
CseI GACGC 2 cut(s) 466, 1759
Csp6I GTAC 1 cut(s) 826
CviQI GTAC 1 cut(s) 826
DdeI CTNAG 5 cut(s) 148, 775, 953, 1281, 1667
DpnI GATC 7 cut(s) 109, 839, 908, 1133, 1154, 1304, 1557
DpnII GATC 7 cut(s) 107, 837, 906, 1131, 1152, 1302, 1555
DrdI GACNNNNNNGTC 4 cut(s) 383, 551, 1696, 1756
DriI GACNNNNNGTC 1 cut(s) 931
DseDI GACNNNNNNGTC 4 cut(s) 383, 551, 1696, 1756
EaeI YGGCCR 5 cut(s) 523, 679, 801, 937, 1526
Eam1104I CTCTTC 2 cut(s) 965, 1355
Eam1105I GACNNNNNGTC 1 cut(s) 931
EarI CTCTTC 2 cut(s) 965, 1355
EciI GGCGGA 2 cut(s) 991, 1058
Ecl136II GAGCTC 1 cut(s) 673
Eco130I CCWWGG 2 cut(s) 312, 1548
Eco147I AGGCCT 1 cut(s) 976
Eco24I GRGCYC 4 cut(s) 28, 675, 1050, 1617
Eco31I GGTCTC 1 cut(s) 343
Eco47I GGWCC 5 cut(s) 453, 553, 622, 739, 897
Eco53kI GAGCTC 1 cut(s) 673
Eco57I CTGAAG 3 cut(s) 150, 275, 1691
Eco72I CACGTG 2 cut(s) 383, 1640
Eco88I CYCGRG 2 cut(s) 893, 1481
EcoICRI GAGCTC 1 cut(s) 673
EcoRI GAATTC 1 cut(s) 1185
EcoRII CCWGG 3 cut(s) 624, 1175, 1815
EcoT14I CCWWGG 2 cut(s) 312, 1548
EcoT22I ATGCAT 2 cut(s) 470, 1316
EcoT38I GRGCYC 4 cut(s) 28, 675, 1050, 1617
ErhI CCWWGG 2 cut(s) 312, 1548
FaqI GGGAC 1 cut(s) 466
FauI CCCGC 4 cut(s) 624, 704, 1133, 1450
FbaI TGATCA 1 cut(s) 1131
FblI GTMKAC 4 cut(s) 480, 780, 924, 1406
Fnu4HI GCNGC 7 cut(s) 266, 300, 475, 582, 721, 871, 1121
FokI GGATG 1 cut(s) 183
FriOI GRGCYC 4 cut(s) 28, 675, 1050, 1617
Fsp4HI GCNGC 7 cut(s) 266, 300, 475, 582, 721, 871, 1121
FspBI CTAG 1 cut(s) 83
GlaI GCGC 4 cut(s) 496, 717, 719, 724
GluI GCNGC 7 cut(s) 266, 300, 475, 582, 721, 871, 1121
GsaI CCCAGC 1 cut(s) 747
GsuI CTGGAG 1 cut(s) 140
HaeII RGCGCY 1 cut(s) 726
HgaI GACGC 2 cut(s) 466, 1759
HhaI GCGC 4 cut(s) 497, 718, 720, 725
Hin1I GRCGYC 2 cut(s) 477, 963
Hin6I GCGC 4 cut(s) 495, 716, 718, 723
HinP1I GCGC 4 cut(s) 495, 716, 718, 723
HincII GTYRAC 2 cut(s) 925, 1407
HindII GTYRAC 2 cut(s) 925, 1407
HphI GGTGA 6 cut(s) 554, 1066, 1126, 1162, 1477, 1622
Hpy188III TCNNGA 8 cut(s) 100, 967, 1022, 1090, 1097, 1483, 1679, 1761
Hpy99I CGWCG 6 cut(s) 542, 965, 968, 1010, 1091, 1685
HpyAV CCTTC 7 cut(s) 21, 174, 243, 320, 1627, 1638, 1795
HpyCH4III ACNGT 6 cut(s) 253, 542, 865, 1524, 1747, 1758
HpyCH4IV ACGT 7 cut(s) 382, 483, 963, 1026, 1639, 1691, 1787
HpyCH4V TGCA 4 cut(s) 468, 1060, 1123, 1314
HpyF3I CTNAG 5 cut(s) 148, 775, 953, 1281, 1667
HpySE526I ACGT 7 cut(s) 382, 483, 963, 1026, 1639, 1691, 1787
Hsp92I GRCGYC 2 cut(s) 477, 963
HspAI GCGC 4 cut(s) 495, 716, 718, 723
Kpn2I TCCGGA 1 cut(s) 1021
KroI GCCGGC 2 cut(s) 521, 770
KroNI GCCGGC 2 cut(s) 523, 772
Ksp22I TGATCA 1 cut(s) 1131
Kzo9I GATC 7 cut(s) 107, 837, 906, 1131, 1152, 1302, 1555
LmnI GCTCC 9 cut(s) 412, 418, 578, 628, 678, 1045, 1276, 1438, 1702
Lsp1109I GCAGC 3 cut(s) 277, 286, 1107
LweI GCATC 3 cut(s) 699, 762, 1047
MaeI CTAG 1 cut(s) 83
MaeII ACGT 7 cut(s) 382, 483, 963, 1026, 1639, 1691, 1787
MaeIII GTNAC 5 cut(s) 253, 431, 488, 542, 1747
MalI GATC 7 cut(s) 109, 839, 908, 1133, 1154, 1304, 1557
MauBI CGCGCGCG 1 cut(s) 716
MbiI CCGCTC 1 cut(s) 631
MboI GATC 7 cut(s) 107, 837, 906, 1131, 1152, 1302, 1555
MflI RGATCY 2 cut(s) 107, 1555
MhlI GDGCHC 4 cut(s) 28, 675, 1050, 1617
MlsI TGGCCA 2 cut(s) 803, 1528
MluCI AATT 7 cut(s) 207, 283, 995, 1185, 1221, 1387, 1726
MluNI TGGCCA 2 cut(s) 803, 1528
MlyI GAGTC 9 cut(s) 768, 1292, 1312, 1322, 1402, 1412, 1442, 1486, 1790
MmeI TCCRAC 3 cut(s) 303, 1416, 1680
Mox20I TGGCCA 2 cut(s) 803, 1528
Mph1103I ATGCAT 2 cut(s) 470, 1316
MroI TCCGGA 1 cut(s) 1021
MroNI GCCGGC 2 cut(s) 521, 770
MroXI GAANNNNTTC 1 cut(s) 989
MscI TGGCCA 2 cut(s) 803, 1528
MseI TTAA 2 cut(s) 210, 1338
MslI CAYNNNNRTG 1 cut(s) 1055
Msp20I TGGCCA 2 cut(s) 803, 1528
MspR9I CCNGG 7 cut(s) 397, 451, 626, 929, 1177, 1238, 1817
MteI GCGCNGCGC 1 cut(s) 721
Mva1269I GAATGC 4 cut(s) 470, 1238, 1270, 1723
MvaI CCWGG 3 cut(s) 626, 1177, 1817
MvnI CGCG 6 cut(s) 202, 343, 497, 716, 718, 720
NaeI GCCGGC 2 cut(s) 523, 772
NciI CCSGG 4 cut(s) 397, 451, 929, 1238
NdeII GATC 7 cut(s) 107, 837, 906, 1131, 1152, 1302, 1555
NgoMIV GCCGGC 2 cut(s) 521, 770
NlaIV GGNNCC 8 cut(s) 414, 454, 580, 741, 898, 1047, 1278, 1475
NmuCI GTSAC 3 cut(s) 431, 542, 1747
NsiI ATGCAT 2 cut(s) 470, 1316
NspI RCATGY 4 cut(s) 322, 597, 823, 1445
NspV TTCGAA 2 cut(s) 14, 882
PaqCI CACCTGC 1 cut(s) 1096
PauI GCGCGC 1 cut(s) 716
PceI AGGCCT 1 cut(s) 976
PciI ACATGT 1 cut(s) 318
PcsI WCGNNNNNNNCGW 3 cut(s) 645, 1074, 1095
PctI GAATGC 4 cut(s) 470, 1238, 1270, 1723
PdiI GCCGGC 2 cut(s) 523, 772
PdmI GAANNNNTTC 1 cut(s) 989
PfeI GAWTC 2 cut(s) 1093, 1468
PflMI CCANNNNNTGG 2 cut(s) 619, 1108
PfoI TCCNGGA 2 cut(s) 449, 624
PkrI GCNGC 7 cut(s) 267, 301, 476, 583, 722, 872, 1122
PleI GAGTC 9 cut(s) 767, 1291, 1312, 1322, 1402, 1411, 1441, 1486, 1790
PmaCI CACGTG 2 cut(s) 383, 1640
PmlI CACGTG 2 cut(s) 383, 1640
PpsI GAGTC 9 cut(s) 767, 1291, 1312, 1322, 1402, 1411, 1441, 1486, 1790
Ppu21I YACGTR 2 cut(s) 383, 1640
PscI ACATGT 1 cut(s) 318
Psp124BI GAGCTC 1 cut(s) 675
Psp6I CCWGG 3 cut(s) 624, 1175, 1815
PspCI CACGTG 2 cut(s) 383, 1640
PspFI CCCAGC 1 cut(s) 743
PspGI CCWGG 3 cut(s) 624, 1175, 1815
PspN4I GGNNCC 8 cut(s) 414, 454, 580, 741, 898, 1047, 1278, 1475
PspPI GGNCC 7 cut(s) 453, 553, 622, 730, 739, 868, 897
PstI CTGCAG 1 cut(s) 1125
PsuI RGATCY 2 cut(s) 107, 1555
PteI GCGCGC 1 cut(s) 716
RsaI GTAC 1 cut(s) 827
RsaNI GTAC 1 cut(s) 826
RseI CAYNNNNRTG 1 cut(s) 1055
SacI GAGCTC 1 cut(s) 675
SalI GTCGAC 2 cut(s) 923, 1405
SaqAI TTAA 2 cut(s) 210, 1338
SatI GCNGC 7 cut(s) 266, 300, 475, 582, 721, 871, 1121
Sau3AI GATC 7 cut(s) 107, 837, 906, 1131, 1152, 1302, 1555
Sau96I GGNCC 7 cut(s) 453, 553, 622, 730, 739, 868, 897
SchI GAGTC 9 cut(s) 768, 1292, 1312, 1322, 1402, 1412, 1442, 1486, 1790
ScrFI CCNGG 7 cut(s) 397, 451, 626, 929, 1177, 1238, 1817
SduI GDGCHC 4 cut(s) 28, 675, 1050, 1617
SfaNI GCATC 3 cut(s) 699, 762, 1047
SfcI CTRYAG 1 cut(s) 1121
SfuI TTCGAA 2 cut(s) 14, 882
SgrAI CRCCGGYG 2 cut(s) 1136, 1147
SinI GGWCC 5 cut(s) 453, 553, 622, 739, 897
SmiMI CAYNNNNRTG 1 cut(s) 1055
SpeI ACTAGT 1 cut(s) 82
Sse9I AATT 7 cut(s) 207, 283, 995, 1185, 1221, 1387, 1726
SseBI AGGCCT 1 cut(s) 976
SspMI CTAG 1 cut(s) 83
SstI GAGCTC 1 cut(s) 675
StuI AGGCCT 1 cut(s) 976
StyD4I CCNGG 7 cut(s) 395, 449, 624, 927, 1175, 1236, 1815
StyI CCWWGG 2 cut(s) 312, 1548
TaaI ACNGT 6 cut(s) 253, 542, 865, 1524, 1747, 1758
TaiI ACGT 7 cut(s) 385, 486, 966, 1029, 1642, 1694, 1790
TaqI TCGA 8 cut(s) 14, 537, 858, 882, 924, 1331, 1406, 1799
TasI AATT 7 cut(s) 207, 283, 995, 1185, 1221, 1387, 1726
TauI GCSGC 4 cut(s) 477, 584, 723, 873
TfiI GAWTC 2 cut(s) 1093, 1468
Tru1I TTAA 2 cut(s) 210, 1338
Tru9I TTAA 2 cut(s) 210, 1338
TscAI CASTG 4 cut(s) 284, 610, 870, 1750
TseFI GTSAC 3 cut(s) 431, 542, 1747
TseI GCWGC 3 cut(s) 265, 299, 1120
Tsp45I GTSAC 3 cut(s) 431, 542, 1747
TspDTI ATGAA 2 cut(s) 1739, 1780
TspGWI ACGGA 5 cut(s) 419, 476, 591, 1605, 1758
TspRI CASTG 4 cut(s) 284, 610, 870, 1750
Van91I CCANNNNNTGG 2 cut(s) 619, 1108
VpaK11BI GGWCC 5 cut(s) 453, 553, 622, 739, 897
XapI RAATTY 3 cut(s) 283, 1185, 1726
XceI RCATGY 4 cut(s) 322, 597, 823, 1445
XmiI GTMKAC 4 cut(s) 480, 780, 924, 1406
XmnI GAANNNNTTC 1 cut(s) 989
XspI CTAG 1 cut(s) 83
ZraI GACGTC 1 cut(s) 964
Zsp2I ATGCAT 2 cut(s) 470, 1316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.