Rh5DG281500

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000062
Physical Location & Seq
Forward (+)
34617033 .. 34622328
5296 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG281500.1

Sequence Viewer

Length: 1824 bp
ATGGATTCAATGTCAAAGCTTCAAGCAAGAGTTGAAGATAGGTTGGGTGCACTACCAGATGAAGTTATTTGTCACGTACTTTCCTTCCTCGGGACAAACTGTGCTGTGAGGACCACGATTCTGTCAAAGAGGTGGAACAACAAATGGACTTTGGTTCCCAATCTAGACTTCGAAGACGAGGAGTTCTACAGACTTGTTCATTTTAAAAGGAATTTCTGTTACTTGTCTCTTACTGATGATAATTTTGAGGGTTGTTTGCTGCCTACTTTTGAATACTTGAGCCATTTGAAGCTGCATCTTCGTGATTGCAATTATGGGAGATTGCTAACAGAGTCACTCCAGAAATTTCCTAATCTGGAATGTCTTGACATTGACTATGCAAGGAAAAACGCCGCCGTTAAGGATTCTCTTCTTCGCTCTTCTCATTGTTCTGTGCAACCAAGCAAAGCTAGACTGCTGGGTTTAGATATGGATTCAATGTCAGAGTCTCAAGGAAGAATTGAGGATAGGTTAAGTGCGCTACCAGATGAAGTTCTTTGTCACATACTTTCCTTCCTCCCCACAAAATTTGCTGTGATGACCACAGTTCTGTCAAAGAGGTGGAAAAACAAATGGACTGCTGTTTCCAATCTAGACTTCATGGATGAAGCATTCCATAGAGATGTTGAGTTCAAAAGGTTTGTAAATTGGGTACTTGACTTTCGTGGTTTGTCAAACATCCAAAAATTCAAACTTGAATGTTCGCGTTACTACAATTTTCAGCGTTCACCCTACATAGGAATGTTCACTGTTGACCATAGGCGTGATAAATATCTCTCTCTTATTCGTCATTGGATTCGCACTGCCATTGGACGTAATGTTATTGAACTTGACCTGTATATCGAGTTATTTTCAGAACGACATGATTTTGTGTTACCTAAGAGCCTTTTTGTGTGTAAAACACTGGAGGTTTTGAAGATTGGGCCAAATTTTATTATCAATGATCTTCCCCAGTCAGAGAACTTCTTCCCAAGCCTCAAGTTTCTTGCTGTTTTTGTTCACCATCCCGACAATGGCTCAATGGAAAAGCTTTTTCCTCACTTTCCACTACTTGAAGATTTGGCTATAGATGGAATCCTCAGGCAAAAGGAAGATTTGAAAGTCAACATCTCTGCACCTAAACTGAAGACGTTAAGAATATATTTGGAGGTTGACAGATGTGATTATCATGAGCACAATTTTCACATTAAAGCTCCAAATCTTGAAAATCTTGATCTCATGCAAGATAATTTTATAAATTTTACTTTGGAAACTCCAAACTCCCTAGTCAAAGCTGAAGTTGATGTCAGAGGGCGTTATGCAAAAGAAAATCCTGATCATGCAATTGCACTTCCTGAAGGAATTTCCAATGTCAAGTACCTGTCTCTCAGAGATAATACTTTCGAGGGTTGTCCTCTGCCTACATTTAATAACTTGAACCATTTGAAGCTGTGTCTTTGTGATTGCAATTATGGGAGATTGCTAACAGAGTCGCTCAAGAGTTTTCCTAATCTGGAACATCTTGACATTGAATATAGGTCCCTAAGTCGTGGAGAACTTTATCTACCGGAGTTTGTGCCGTTTTGTTTGTTGTCACGTCTCAAGACTATCTCTATAAGGGGATTTGAGGGACATCAAGTTGAGATGGAAGCGGCCAAGTACTTGTTAAAGAATGGTAGACTTCTGAAAAAGATGACAATTGATACTTATTACCTGCACAACAAAATGGAGGTGTTGTATAAGGAATTTTTGATGCTTCAAAGGGGTTCACTGAATTGTCAAGTTGAATTTGTCGAAATGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

607

Amino Acids

71.05

Weight (kDa)

6.73

Isoelectric Point (pI)

43.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 171 - 208 7e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 266 - 582 4.1e-08 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 276 - 424 3.5e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 529 - 573 1.7e-15 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1274
Acc36I ACCTGC 1 cut(s) 1740
AccI GTMKAC 1 cut(s) 1696
AccII CGCG 1 cut(s) 745
AciI CCGC 2 cut(s) 393, 1670
AcoI YGGCCR 1 cut(s) 1671
AcsI RAATTY 9 cut(s) 211, 344, 566, 725, 967, 1276, 1380, 1763, 1805
AcuI CTGAAG 3 cut(s) 1184, 1335, 1395
AfaI GTAC 4 cut(s) 78, 693, 1397, 1679
AfiI CCNNNNNNNGG 3 cut(s) 90, 776, 1052
AjiI CACGTC 1 cut(s) 1616
AjuI GAANNNNNNNTTGG 4 cut(s) 152, 184, 620, 652
AluBI AGCT 7 cut(s) 19, 292, 449, 1069, 1232, 1313, 1468
AluI AGCT 7 cut(s) 19, 292, 449, 1069, 1232, 1313, 1468
Alw21I GWGCWC 2 cut(s) 52, 1215
Alw26I GTCTC 4 cut(s) 231, 492, 1407, 1622
Alw44I GTGCAC 1 cut(s) 48
Ama87I CYCGRG 1 cut(s) 89
AoxI GGCC 2 cut(s) 962, 1671
ApaLI GTGCAC 1 cut(s) 48
ApeKI GCWGC 2 cut(s) 259, 292
ApoI RAATTY 9 cut(s) 211, 344, 566, 725, 967, 1276, 1380, 1763, 1805
Asp700I GAANNNNTTC 1 cut(s) 1004
AspLEI GCGC 1 cut(s) 520
AspS9I GGNCC 3 cut(s) 111, 962, 1557
AsuHPI GGTGA 2 cut(s) 759, 1031
AsuII TTCGAA 1 cut(s) 171
AvaI CYCGRG 1 cut(s) 89
AvaII GGWCC 2 cut(s) 111, 1557
AxyI CCTNAGG 1 cut(s) 1118
BaeGI GKGCMC 1 cut(s) 52
BbsI GAAGAC 2 cut(s) 180, 1172
Bbv12I GWGCWC 2 cut(s) 52, 1215
BbvI GCAGC 2 cut(s) 246, 279
BccI CCATC 3 cut(s) 1050, 1103, 1657
BceAI ACGGC 2 cut(s) 380, 1582
BclI TGATCA 1 cut(s) 1354
BcoDI GTCTC 4 cut(s) 231, 492, 1407, 1622
BfaI CTAG 4 cut(s) 164, 450, 632, 1304
BfmI CTRYAG 2 cut(s) 187, 1104
BfuAI ACCTGC 1 cut(s) 1740
BisI GCNGC 4 cut(s) 260, 293, 393, 1671
BlsI GCNGC 4 cut(s) 261, 294, 394, 1672
BmcAI AGTACT 1 cut(s) 1679
Bme18I GGWCC 2 cut(s) 111, 1557
BmeT110I CYCGRG 1 cut(s) 89
BmgBI CACGTC 1 cut(s) 1616
BmgT120I GGNCC 3 cut(s) 111, 962, 1557
BmiI GGNNCC 2 cut(s) 156, 1559
BmrI ACTGGG 1 cut(s) 985
BmsI GCATC 2 cut(s) 304, 1761
BmuI ACTGGG 1 cut(s) 985
BpiI GAAGAC 2 cut(s) 180, 1172
BpmI CTGGAG 2 cut(s) 323, 965
Bpu14I TTCGAA 1 cut(s) 171
BpuEI CTTGAG 5 cut(s) 298, 474, 1001, 1499, 1604
BsaAI YACGTR 1 cut(s) 76
BsaBI GATNNNNATC 1 cut(s) 810
BsaJI CCNNGG 1 cut(s) 88
BsaWI WCCGGW 1 cut(s) 1585
BsaXI ACNNNNNCTCC 2 cut(s) 1739, 1769
Bsc4I CCNNNNNNNGG 3 cut(s) 90, 776, 1052
Bse1I ACTGG 2 cut(s) 948, 991
Bse21I CCTNAGG 1 cut(s) 1118
Bse8I GATNNNNATC 1 cut(s) 810
BseDI CCNNGG 1 cut(s) 88
BseGI GGATG 3 cut(s) 649, 717, 1042
BseJI GATNNNNATC 1 cut(s) 810
BseLI CCNNNNNNNGG 3 cut(s) 90, 776, 1052
BseMII CTCAG 2 cut(s) 1132, 1420
BseNI ACTGG 2 cut(s) 948, 991
BseRI GAGGAG 1 cut(s) 194
BseSI GKGCMC 1 cut(s) 52
BseXI GCAGC 2 cut(s) 246, 279
BseYI CCCAGC 1 cut(s) 457
BsgI GTGCAG 2 cut(s) 1137, 1718
Bsh1236I CGCG 1 cut(s) 745
BshFI GGCC 2 cut(s) 964, 1673
BsiHKAI GWGCWC 2 cut(s) 52, 1215
BsiHKCI CYCGRG 1 cut(s) 89
BsiSI CCGG 1 cut(s) 1586
BslFI GGGAC 3 cut(s) 106, 1543, 1662
BslI CCNNNNNNNGG 3 cut(s) 90, 776, 1052
BsmAI GTCTC 4 cut(s) 231, 492, 1407, 1622
BsmBI CGTCTC 1 cut(s) 1622
BsmFI GGGAC 3 cut(s) 106, 1543, 1662
BsmI GAATGC 1 cut(s) 650
BsnI GGCC 2 cut(s) 964, 1673
BsoBI CYCGRG 1 cut(s) 89
Bsp119I TTCGAA 1 cut(s) 171
Bsp1286I GDGCHC 2 cut(s) 52, 1215
Bsp143I GATC 3 cut(s) 982, 1252, 1354
BspACI CCGC 2 cut(s) 393, 1670
BspANI GGCC 2 cut(s) 964, 1673
BspCNI CTCAG 2 cut(s) 1131, 1419
BspFNI CGCG 1 cut(s) 745
BspHI TCATGA 1 cut(s) 1207
BspLI GGNNCC 2 cut(s) 156, 1559
BspMI ACCTGC 1 cut(s) 1740
BspQI GCTCTTC 1 cut(s) 424
BspT104I TTCGAA 1 cut(s) 171
BsrI ACTGG 2 cut(s) 948, 991
BssECI CCNNGG 1 cut(s) 88
BssMI GATC 3 cut(s) 982, 1252, 1354
Bst4CI ACNGT 3 cut(s) 101, 586, 790
Bst6I CTCTTC 2 cut(s) 414, 424
BstBAI YACGTR 1 cut(s) 76
BstBI TTCGAA 1 cut(s) 171
BstDEI CTNAG 4 cut(s) 918, 1118, 1406, 1562
BstF5I GGATG 3 cut(s) 649, 717, 1042
BstFNI CGCG 1 cut(s) 745
BstHHI GCGC 1 cut(s) 520
BstKTI GATC 3 cut(s) 985, 1255, 1357
BstMAI GTCTC 4 cut(s) 231, 492, 1407, 1622
BstMBI GATC 3 cut(s) 982, 1252, 1354
BstSFI CTRYAG 2 cut(s) 187, 1104
BstSLI GKGCMC 1 cut(s) 52
BstUI CGCG 1 cut(s) 745
BstV1I GCAGC 2 cut(s) 246, 279
BstV2I GAAGAC 2 cut(s) 180, 1172
Bsu36I CCTNAGG 1 cut(s) 1118
BsuRI GGCC 2 cut(s) 964, 1673
BtrI CACGTC 1 cut(s) 1616
BtsCI GGATG 3 cut(s) 649, 717, 1042
BtsI GCAGTG 1 cut(s) 840
BtsIMutI CAGTG 4 cut(s) 786, 840, 941, 1787
BveI ACCTGC 1 cut(s) 1740
CciI TCATGA 1 cut(s) 1207
CfoI GCGC 1 cut(s) 520
Cfr13I GGNCC 3 cut(s) 111, 962, 1557
Csp6I GTAC 4 cut(s) 77, 692, 1396, 1678
CspCI CAANNNNNGTGG 2 cut(s) 550, 585
CviAII CATG 5 cut(s) 640, 902, 1208, 1258, 1358
CviQI GTAC 4 cut(s) 77, 692, 1396, 1678
DdeI CTNAG 4 cut(s) 918, 1118, 1406, 1562
DpnI GATC 3 cut(s) 984, 1254, 1356
DpnII GATC 3 cut(s) 982, 1252, 1354
DraI TTTAAA 1 cut(s) 205
EaeI YGGCCR 1 cut(s) 1671
Eam1104I CTCTTC 2 cut(s) 414, 424
EarI CTCTTC 2 cut(s) 414, 424
Eco47I GGWCC 2 cut(s) 111, 1557
Eco57I CTGAAG 3 cut(s) 1184, 1335, 1395
Eco81I CCTNAGG 1 cut(s) 1118
Eco88I CYCGRG 1 cut(s) 89
EcoO109I RGGNCCY 1 cut(s) 1557
Esp3I CGTCTC 1 cut(s) 1622
FaeI CATG 5 cut(s) 643, 905, 1211, 1261, 1361
FaqI GGGAC 3 cut(s) 106, 1543, 1662
FatI CATG 5 cut(s) 639, 901, 1207, 1257, 1357
FbaI TGATCA 1 cut(s) 1354
FblI GTMKAC 1 cut(s) 1696
Fnu4HI GCNGC 4 cut(s) 260, 293, 393, 1671
FokI GGATG 3 cut(s) 656, 704, 1029
Fsp4HI GCNGC 4 cut(s) 260, 293, 393, 1671
FspBI CTAG 4 cut(s) 164, 450, 632, 1304
GlaI GCGC 1 cut(s) 519
GluI GCNGC 4 cut(s) 260, 293, 393, 1671
GsaI CCCAGC 1 cut(s) 461
GsuI CTGGAG 2 cut(s) 323, 965
HaeIII GGCC 2 cut(s) 964, 1673
HapII CCGG 1 cut(s) 1586
HhaI GCGC 1 cut(s) 520
Hin1II CATG 5 cut(s) 643, 905, 1211, 1261, 1361
Hin6I GCGC 1 cut(s) 518
HinP1I GCGC 1 cut(s) 518
HincII GTYRAC 3 cut(s) 793, 1144, 1192
HindII GTYRAC 3 cut(s) 793, 1144, 1192
HindIII AAGCTT 2 cut(s) 17, 1067
HinfI GANTC 9 cut(s) 5, 118, 332, 404, 473, 485, 835, 1113, 1508
HpaII CCGG 1 cut(s) 1586
HphI GGTGA 2 cut(s) 759, 1031
Hpy166II GTNNAC 9 cut(s) 50, 767, 786, 793, 1039, 1144, 1192, 1697, 1787
Hpy188I TCNGA 6 cut(s) 484, 895, 997, 1328, 1409, 1704
Hpy8I GTNNAC 9 cut(s) 50, 767, 786, 793, 1039, 1144, 1192, 1697, 1787
HpyAV CCTTC 3 cut(s) 94, 562, 1370
HpyCH4III ACNGT 3 cut(s) 101, 586, 790
HpyCH4IV ACGT 4 cut(s) 75, 853, 1169, 1615
HpyF3I CTNAG 4 cut(s) 918, 1118, 1406, 1562
HpySE526I ACGT 4 cut(s) 75, 853, 1169, 1615
Hsp92II CATG 5 cut(s) 643, 905, 1211, 1261, 1361
HspAI GCGC 1 cut(s) 518
Ksp22I TGATCA 1 cut(s) 1354
Kzo9I GATC 3 cut(s) 982, 1252, 1354
LguI GCTCTTC 1 cut(s) 424
LmnI GCTCC 1 cut(s) 1237
Lsp1109I GCAGC 2 cut(s) 246, 279
LweI GCATC 2 cut(s) 304, 1761
MaeI CTAG 4 cut(s) 164, 450, 632, 1304
MaeII ACGT 4 cut(s) 75, 853, 1169, 1615
MaeIII GTNAC 7 cut(s) 71, 218, 333, 539, 746, 912, 1611
MalI GATC 3 cut(s) 984, 1254, 1356
MboI GATC 3 cut(s) 982, 1252, 1354
MfeI CAATTG 2 cut(s) 1362, 1716
MhlI GDGCHC 2 cut(s) 52, 1215
MlyI GAGTC 3 cut(s) 341, 494, 1517
MroXI GAANNNNTTC 1 cut(s) 1004
MseI TTAA 7 cut(s) 204, 399, 512, 1172, 1227, 1446, 1685
MslI CAYNNNNRTG 4 cut(s) 300, 660, 779, 801
MspI CCGG 1 cut(s) 1586
MunI CAATTG 2 cut(s) 1362, 1716
Mva1269I GAATGC 1 cut(s) 650
MvnI CGCG 1 cut(s) 745
NdeII GATC 3 cut(s) 982, 1252, 1354
NlaIII CATG 5 cut(s) 643, 905, 1211, 1261, 1361
NlaIV GGNNCC 2 cut(s) 156, 1559
NmuCI GTSAC 4 cut(s) 71, 333, 539, 1611
NspV TTCGAA 1 cut(s) 171
PagI TCATGA 1 cut(s) 1207
PciSI GCTCTTC 1 cut(s) 424
PctI GAATGC 1 cut(s) 650
PdmI GAANNNNTTC 1 cut(s) 1004
PfeI GAWTC 6 cut(s) 5, 118, 404, 473, 835, 1113
PkrI GCNGC 4 cut(s) 261, 294, 394, 1672
PleI GAGTC 3 cut(s) 340, 493, 1516
PpsI GAGTC 3 cut(s) 340, 493, 1516
Ppu21I YACGTR 1 cut(s) 76
PpuMI RGGWCCY 1 cut(s) 1557
PsiI TTATAA 1 cut(s) 1274
Psp5II RGGWCCY 1 cut(s) 1557
PspFI CCCAGC 1 cut(s) 457
PspN4I GGNNCC 2 cut(s) 156, 1559
PspPI GGNCC 3 cut(s) 111, 962, 1557
PspPPI RGGWCCY 1 cut(s) 1557
PsrI GAACNNNNNNTAC 2 cut(s) 1566, 1598
RsaI GTAC 4 cut(s) 78, 693, 1397, 1679
RsaNI GTAC 4 cut(s) 77, 692, 1396, 1678
RseI CAYNNNNRTG 4 cut(s) 300, 660, 779, 801
SapI GCTCTTC 1 cut(s) 424
SaqAI TTAA 7 cut(s) 204, 399, 512, 1172, 1227, 1446, 1685
SatI GCNGC 4 cut(s) 260, 293, 393, 1671
Sau3AI GATC 3 cut(s) 982, 1252, 1354
Sau96I GGNCC 3 cut(s) 111, 962, 1557
ScaI AGTACT 1 cut(s) 1679
SchI GAGTC 3 cut(s) 341, 494, 1517
SduI GDGCHC 2 cut(s) 52, 1215
SfaNI GCATC 2 cut(s) 304, 1761
SfcI CTRYAG 2 cut(s) 187, 1104
SfuI TTCGAA 1 cut(s) 171
SinI GGWCC 2 cut(s) 111, 1557
SmiMI CAYNNNNRTG 4 cut(s) 300, 660, 779, 801
SmlI CTYRAG 5 cut(s) 277, 489, 1016, 1514, 1619
SmoI CTYRAG 5 cut(s) 277, 489, 1016, 1514, 1619
SsiI CCGC 2 cut(s) 393, 1670
SspMI CTAG 4 cut(s) 164, 450, 632, 1304
TaaI ACNGT 3 cut(s) 101, 586, 790
TaiI ACGT 4 cut(s) 78, 856, 1172, 1618
TaqI TCGA 4 cut(s) 171, 882, 1422, 1812
TatI WGTACW 1 cut(s) 1677
TauI GCSGC 2 cut(s) 395, 1673
TfiI GAWTC 6 cut(s) 5, 118, 404, 473, 835, 1113
Tru1I TTAA 7 cut(s) 204, 399, 512, 1172, 1227, 1446, 1685
Tru9I TTAA 7 cut(s) 204, 399, 512, 1172, 1227, 1446, 1685
TscAI CASTG 4 cut(s) 793, 847, 948, 1794
TseFI GTSAC 4 cut(s) 71, 333, 539, 1611
TseI GCWGC 2 cut(s) 259, 292
Tsp45I GTSAC 4 cut(s) 71, 333, 539, 1611
TspDTI ATGAA 5 cut(s) 75, 188, 543, 628, 660
TspRI CASTG 4 cut(s) 793, 847, 948, 1794
VneI GTGCAC 1 cut(s) 48
VpaK11BI GGWCC 2 cut(s) 111, 1557
XapI RAATTY 9 cut(s) 211, 344, 566, 725, 967, 1276, 1380, 1763, 1805
XbaI TCTAGA 2 cut(s) 163, 631
XcmI CCANNNNNNNNNTGG 1 cut(s) 1049
XmiI GTMKAC 1 cut(s) 1696
XmnI GAANNNNTTC 1 cut(s) 1004
XspI CTAG 4 cut(s) 164, 450, 632, 1304
ZrmI AGTACT 1 cut(s) 1679
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.