AT1G78840

F-box FBD LRR-repeat protein At1g16930-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000062
Physical Location & Seq
Reverse (-)
29639290 .. 29641018
1729 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G78840.1

Sequence Viewer

Length: 1320 bp
ATGGAAAACAAAGATTTGATTAGCCAATTATTGCCGGACCACGTACTGCATGAGATACTCCTAAAACTTGCGACGAAAGATTCTGTTAAAACCAGTATCTTGTCCACGAGATGGAGATATATTTGGCAACGTGTTCCTGGATTGGACCTTAACCAAACTAACTTCAGATACAAGGGGTTAAAGGGTTTTGTCAACAGGTTTCTAGATTTGGATAAGAAATCACTCATATACCAATTGAAGTTGGAATTTGACGGCAGGAAGTATGAGACTGAAGGATCCCTTTTCAACAAGTGGGTCGACTCAGTGGTTACCCGTGGAGTTCAGCATCTTGTGAACAATTATTGTCCCATAAAACTTCCGGGAAGCATTTCTATGTGTGAAACATTGGTACACTTGAAGCTGGTCGAGGTAGGCATTGATAGTTTTGACTCCGTTTCTCTACCTCGTCTTGAGACTATGCATTTACTATCGGTTTGGTTTTCGAGCGAAGCGGCTCTAGAGAGGCTTATCTCATCCTCCCCAGTTCTTCAAGTTTTGTACATTGAAAAAGTTTGGAATGTGGAAGTTATACGAGTGCGGTCTCAGACACTATATAGCTTGAGAATGCGTATTTGGAAAAGAGATTTAGATTGGAACAAAGATTTAACAAAAATTGGGCTAGTGATTGATGCTCCTAGGCTTAAGTCTCTGAATCTTCAAATCCACCGGTTTAAAGACCTTGTGCTGAATAGTGTATGTTCTCCGCTCAAAGTGGATATTAGTATCTCTAAAGGAGAGTTTAATCCTATTAACTCATTGACGATGAAAACATTGCGTACATTTATTGCTTGGATATCAAATGTCACAAATCTTGCACTCAATTACTGTTGTCTAGAGGCTATGTATGCTTACTCTAGCTCGGAACCATTGCCTCAGTTCTCTAACTTAACCCATTTGGAAGTTTCGATGGACTCCTCTTGTTTAAAGTTGTTACCAACGTTTCTCGCAAGCTGTCCAAACCTAAAATCTCTAGAGTTGTGGGTTCACGATCATCGTCTAGATATATTGGATATCTCAAGATCAACTATGCCTAAGTGTCTGCTAATATCGCTCAAGTTTGTTACGATATACAGCACAGCTATGATATCCAGCTCGGTTGAGAATCAGGTCGAAACCGAGCTTGTCAAATACATCCTGGGGAATGCAGCAGTTGTCAAGGAGCTTACTCTTCGATTCATTTTATGGGCAGAAGAACACAGGTTTCAACTTAGCAAGCAAATCCTTGCGTTTCCAAAGCTTTCTTCTGCTTGTCAAGTCTTTCTTCATTCGTCGTTTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

439

Amino Acids

50.51

Weight (kDa)

8.89

Isoelectric Point (pI)

39.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 10 - 45 1.1e-06 F-box domain
LRR_At5g56370 PF24758 96 - 232 7.5e-15 FBD-associated F-box protein At5g56370, LRR repeats
LRR_2 PF07723 150 - 174 1.5e-07 Leucine Rich Repeat
FBD PF08387 354 - 403 1.3e-08 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 111
AccBSI CCGCTC 1 cut(s) 745
AccI GTMKAC 1 cut(s) 297
AciI CCGC 3 cut(s) 491, 577, 743
AclI AACGTT 1 cut(s) 977
AclWI GGATC 2 cut(s) 270, 283
AcsI RAATTY 1 cut(s) 245
AcuI CTGAAG 2 cut(s) 148, 291
AfaI GTAC 4 cut(s) 45, 390, 539, 817
AfiI CCNNNNNNNGG 1 cut(s) 111
AflII CTTAAG 1 cut(s) 680
AflIII ACRYGT 1 cut(s) 130
AgeI ACCGGT 1 cut(s) 705
AgsI TTSAA 7 cut(s) 238, 286, 397, 530, 545, 698, 1244
AjnI CCWGG 2 cut(s) 136, 1173
AjuI GAANNNNNNNTTGG 4 cut(s) 595, 627, 1264, 1296
AluBI AGCT 9 cut(s) 400, 597, 897, 990, 1118, 1131, 1159, 1201, 1276
AluI AGCT 9 cut(s) 400, 597, 897, 990, 1118, 1131, 1159, 1201, 1276
Alw26I GTCTC 4 cut(s) 260, 446, 585, 690
AlwI GGATC 2 cut(s) 270, 283
ApeKI GCWGC 1 cut(s) 1184
ApoI RAATTY 1 cut(s) 245
AsiGI ACCGGT 1 cut(s) 705
Asp700I GAANNNNTTC 1 cut(s) 367
AspA2I CCTAGG 1 cut(s) 674
AspS9I GGNCC 2 cut(s) 37, 145
AsuC2I CCSGG 1 cut(s) 360
AvaII GGWCC 2 cut(s) 37, 145
AvrII CCTAGG 1 cut(s) 674
BamHI GGATCC 1 cut(s) 275
BauI CACGAG 1 cut(s) 106
BbvI GCAGC 1 cut(s) 1196
BccI CCATC 2 cut(s) 105, 940
BceAI ACGGC 1 cut(s) 268
BciT130I CCWGG 2 cut(s) 138, 1175
BcnI CCSGG 1 cut(s) 360
BcoDI GTCTC 4 cut(s) 260, 446, 585, 690
BfaI CTAG 8 cut(s) 203, 497, 659, 675, 872, 894, 1010, 1037
BfrI CTTAAG 1 cut(s) 680
BisI GCNGC 2 cut(s) 492, 1185
BlnI CCTAGG 1 cut(s) 674
BlsI GCNGC 2 cut(s) 493, 1186
Bme1390I CCNGG 3 cut(s) 138, 360, 1175
Bme18I GGWCC 2 cut(s) 37, 145
BmgT120I GGNCC 2 cut(s) 37, 145
BmiI GGNNCC 2 cut(s) 277, 903
BmrFI CCNGG 3 cut(s) 138, 360, 1175
BmrI ACTGGG 1 cut(s) 515
BmsI GCATC 2 cut(s) 334, 658
BmuI ACTGGG 1 cut(s) 515
BpuEI CTTGAG 4 cut(s) 470, 619, 1039, 1076
BpuMI CCSGG 1 cut(s) 360
BsaAI YACGTR 1 cut(s) 43
BsaI GGTCTC 1 cut(s) 585
BsaJI CCNNGG 3 cut(s) 313, 674, 1174
BsaWI WCCGGW 1 cut(s) 705
Bsc4I CCNNNNNNNGG 1 cut(s) 111
Bse118I RCCGGY 1 cut(s) 705
Bse1I ACTGG 2 cut(s) 93, 521
Bse3DI GCAATG 2 cut(s) 809, 905
BseBI CCWGG 2 cut(s) 138, 1175
BseDI CCNNGG 3 cut(s) 313, 674, 1174
BseGI GGATG 2 cut(s) 512, 1170
BseLI CCNNNNNNNGG 1 cut(s) 111
BseMI GCAATG 2 cut(s) 809, 905
BseMII CTCAG 3 cut(s) 315, 596, 926
BseNI ACTGG 2 cut(s) 93, 521
BseRI GAGGAG 1 cut(s) 943
BseXI GCAGC 1 cut(s) 1196
BshTI ACCGGT 1 cut(s) 705
BsiSI CCGG 3 cut(s) 35, 359, 706
BslFI GGGAC 1 cut(s) 330
BslI CCNNNNNNNGG 1 cut(s) 111
BsmAI GTCTC 4 cut(s) 260, 446, 585, 690
BsmFI GGGAC 1 cut(s) 330
BsmI GAATGC 2 cut(s) 609, 1186
Bso31I GGTCTC 1 cut(s) 585
Bsp1407I TGTACA 1 cut(s) 537
Bsp143I GATC 3 cut(s) 275, 1027, 1058
BspACI CCGC 3 cut(s) 491, 577, 743
BspCNI CTCAG 3 cut(s) 314, 595, 925
BspLI GGNNCC 2 cut(s) 277, 903
BspPI GGATC 2 cut(s) 270, 283
BspTI CTTAAG 1 cut(s) 680
BspTNI GGTCTC 1 cut(s) 585
BsrBI CCGCTC 1 cut(s) 745
BsrDI GCAATG 2 cut(s) 809, 905
BsrFI RCCGGY 1 cut(s) 705
BsrGI TGTACA 1 cut(s) 537
BsrI ACTGG 2 cut(s) 93, 521
BssAI RCCGGY 1 cut(s) 705
BssECI CCNNGG 3 cut(s) 313, 674, 1174
BssMI GATC 3 cut(s) 275, 1027, 1058
BssSI CACGAG 1 cut(s) 106
BssT1I CCWWGG 1 cut(s) 674
Bst2BI CACGAG 1 cut(s) 106
Bst2UI CCWGG 2 cut(s) 138, 1175
Bst4CI ACNGT 1 cut(s) 866
Bst6I CTCTTC 1 cut(s) 1212
BstAFI CTTAAG 1 cut(s) 680
BstAUI TGTACA 1 cut(s) 537
BstBAI YACGTR 1 cut(s) 43
BstC8I GCNNGC 2 cut(s) 988, 1253
BstDEI CTNAG 5 cut(s) 301, 582, 912, 1071, 1247
BstDSI CCRYGG 1 cut(s) 313
BstEII GGTNACC 1 cut(s) 307
BstF5I GGATG 2 cut(s) 512, 1170
BstKTI GATC 3 cut(s) 278, 1030, 1061
BstMAI GTCTC 4 cut(s) 260, 446, 585, 690
BstMBI GATC 3 cut(s) 275, 1027, 1058
BstMWI GCNNNNNNNGC 2 cut(s) 884, 1087
BstNI CCWGG 2 cut(s) 138, 1175
BstPI GGTNACC 1 cut(s) 307
BstSCI CCNGG 3 cut(s) 136, 358, 1173
BstV1I GCAGC 1 cut(s) 1196
BstX2I RGATCY 1 cut(s) 275
BstYI RGATCY 1 cut(s) 275
BtgI CCRYGG 1 cut(s) 313
BtsCI GGATG 2 cut(s) 512, 1170
BtsIMutI CAGTG 1 cut(s) 309
Cac8I GCNNGC 2 cut(s) 988, 1253
Cfr10I RCCGGY 1 cut(s) 705
Cfr13I GGNCC 2 cut(s) 37, 145
Csp6I GTAC 4 cut(s) 44, 389, 538, 816
CspAI ACCGGT 1 cut(s) 705
CviAII CATG 1 cut(s) 50
CviQI GTAC 4 cut(s) 44, 389, 538, 816
DdeI CTNAG 5 cut(s) 301, 582, 912, 1071, 1247
DpnI GATC 3 cut(s) 277, 1029, 1060
DpnII GATC 3 cut(s) 275, 1027, 1058
DraI TTTAAA 2 cut(s) 712, 963
Eam1104I CTCTTC 1 cut(s) 1212
EarI CTCTTC 1 cut(s) 1212
Eco130I CCWWGG 1 cut(s) 674
Eco31I GGTCTC 1 cut(s) 585
Eco32I GATATC 3 cut(s) 834, 1051, 1125
Eco47I GGWCC 2 cut(s) 37, 145
Eco57I CTGAAG 2 cut(s) 148, 291
Eco91I GGTNACC 1 cut(s) 307
EcoO65I GGTNACC 1 cut(s) 307
EcoRII CCWGG 2 cut(s) 136, 1173
EcoRV GATATC 3 cut(s) 834, 1051, 1125
EcoT14I CCWWGG 1 cut(s) 674
EcoT22I ATGCAT 1 cut(s) 462
ErhI CCWWGG 1 cut(s) 674
FaeI CATG 1 cut(s) 53
FalI AAGNNNNNCTT 4 cut(s) 264, 296, 1284, 1316
FaqI GGGAC 1 cut(s) 330
FatI CATG 1 cut(s) 49
FblI GTMKAC 1 cut(s) 297
Fnu4HI GCNGC 2 cut(s) 492, 1185
FokI GGATG 2 cut(s) 499, 1157
Fsp4HI GCNGC 2 cut(s) 492, 1185
FspBI CTAG 8 cut(s) 203, 497, 659, 675, 872, 894, 1010, 1037
GluI GCNGC 2 cut(s) 492, 1185
HapII CCGG 3 cut(s) 35, 359, 706
Hin1II CATG 1 cut(s) 53
HincII GTYRAC 2 cut(s) 193, 298
HindII GTYRAC 2 cut(s) 193, 298
HindIII AAGCTT 1 cut(s) 1274
HinfI GANTC 7 cut(s) 80, 299, 428, 691, 950, 1141, 1212
HpaII CCGG 3 cut(s) 35, 359, 706
Hpy166II GTNNAC 6 cut(s) 105, 193, 298, 334, 391, 1024
Hpy188I TCNGA 4 cut(s) 167, 585, 690, 901
Hpy188III TCNNGA 8 cut(s) 203, 449, 497, 872, 1010, 1025, 1037, 1056
Hpy8I GTNNAC 6 cut(s) 105, 193, 298, 334, 391, 1024
Hpy99I CGWCG 2 cut(s) 76, 1312
HpyAV CCTTC 1 cut(s) 266
HpyCH4III ACNGT 1 cut(s) 866
HpyCH4IV ACGT 3 cut(s) 42, 130, 977
HpyCH4V TGCA 4 cut(s) 49, 460, 854, 1184
HpyF10VI GCNNNNNNNGC 2 cut(s) 884, 1087
HpyF3I CTNAG 5 cut(s) 301, 582, 912, 1071, 1247
HpySE526I ACGT 3 cut(s) 42, 130, 977
Hsp92II CATG 1 cut(s) 53
Kzo9I GATC 3 cut(s) 275, 1027, 1058
LmnI GCTCC 2 cut(s) 676, 1198
Lsp1109I GCAGC 1 cut(s) 1196
LweI GCATC 2 cut(s) 334, 658
MaeI CTAG 8 cut(s) 203, 497, 659, 675, 872, 894, 1010, 1037
MaeII ACGT 3 cut(s) 42, 130, 977
MaeIII GTNAC 4 cut(s) 307, 841, 969, 1099
MalI GATC 3 cut(s) 277, 1029, 1060
MbiI CCGCTC 1 cut(s) 745
MboI GATC 3 cut(s) 275, 1027, 1058
MboII GAAGA 6 cut(s) 518, 686, 1199, 1241, 1272, 1292
MfeI CAATTG 1 cut(s) 233
MflI RGATCY 1 cut(s) 275
MluCI AATT 6 cut(s) 26, 233, 245, 337, 651, 859
MlyI GAGTC 3 cut(s) 293, 422, 944
MmeI TCCRAC 1 cut(s) 222
MnlI CCTC 7 cut(s) 400, 453, 495, 526, 868, 921, 964
Mph1103I ATGCAT 1 cut(s) 462
MroXI GAANNNNTTC 1 cut(s) 367
MslI CAYNNNNRTG 2 cut(s) 371, 1118
MspCI CTTAAG 1 cut(s) 680
MspI CCGG 3 cut(s) 35, 359, 706
MspR9I CCNGG 3 cut(s) 138, 360, 1175
MunI CAATTG 1 cut(s) 233
Mva1269I GAATGC 2 cut(s) 609, 1186
MvaI CCWGG 2 cut(s) 138, 1175
MwoI GCNNNNNNNGC 2 cut(s) 884, 1087
NciI CCSGG 1 cut(s) 360
NdeII GATC 3 cut(s) 275, 1027, 1058
NlaIII CATG 1 cut(s) 53
NlaIV GGNNCC 2 cut(s) 277, 903
NmuCI GTSAC 1 cut(s) 841
NsiI ATGCAT 1 cut(s) 462
PctI GAATGC 2 cut(s) 609, 1186
PdmI GAANNNNTTC 1 cut(s) 367
PfeI GAWTC 4 cut(s) 80, 691, 1141, 1212
PflMI CCANNNNNTGG 1 cut(s) 111
PfoI TCCNGGA 2 cut(s) 136, 358
PinAI ACCGGT 1 cut(s) 705
PkrI GCNGC 2 cut(s) 493, 1186
PleI GAGTC 3 cut(s) 293, 422, 944
PpsI GAGTC 3 cut(s) 293, 422, 944
Ppu21I YACGTR 1 cut(s) 43
Psp1406I AACGTT 1 cut(s) 977
Psp6I CCWGG 2 cut(s) 136, 1173
PspEI GGTNACC 1 cut(s) 307
PspGI CCWGG 2 cut(s) 136, 1173
PspN4I GGNNCC 2 cut(s) 277, 903
PspPI GGNCC 2 cut(s) 37, 145
PsuI RGATCY 1 cut(s) 275
RsaI GTAC 4 cut(s) 45, 390, 539, 817
RsaNI GTAC 4 cut(s) 44, 389, 538, 816
RseI CAYNNNNRTG 2 cut(s) 371, 1118
SalI GTCGAC 1 cut(s) 296
SatI GCNGC 2 cut(s) 492, 1185
Sau3AI GATC 3 cut(s) 275, 1027, 1058
Sau96I GGNCC 2 cut(s) 37, 145
SchI GAGTC 3 cut(s) 293, 422, 944
ScrFI CCNGG 3 cut(s) 138, 360, 1175
SfaNI GCATC 2 cut(s) 334, 658
SinI GGWCC 2 cut(s) 37, 145
SmiMI CAYNNNNRTG 2 cut(s) 371, 1118
SmlI CTYRAG 5 cut(s) 449, 598, 680, 1054, 1091
SmoI CTYRAG 5 cut(s) 449, 598, 680, 1054, 1091
Sse9I AATT 6 cut(s) 26, 233, 245, 337, 651, 859
SsiI CCGC 3 cut(s) 491, 577, 743
SspMI CTAG 8 cut(s) 203, 497, 659, 675, 872, 894, 1010, 1037
StyD4I CCNGG 3 cut(s) 136, 358, 1173
StyI CCWWGG 1 cut(s) 674
TaaI ACNGT 1 cut(s) 866
TaiI ACGT 3 cut(s) 45, 133, 980
TaqI TCGA 6 cut(s) 297, 405, 482, 944, 1149, 1210
TasI AATT 6 cut(s) 26, 233, 245, 337, 651, 859
TatI WGTACW 1 cut(s) 537
TauI GCSGC 1 cut(s) 494
TfiI GAWTC 4 cut(s) 80, 691, 1141, 1212
TscAI CASTG 1 cut(s) 309
TseFI GTSAC 1 cut(s) 841
TseI GCWGC 1 cut(s) 1184
Tsp45I GTSAC 1 cut(s) 841
TspDTI ATGAA 3 cut(s) 818, 1204, 1292
TspGWI ACGGA 1 cut(s) 421
TspRI CASTG 1 cut(s) 309
Van91I CCANNNNNTGG 1 cut(s) 111
Vha464I CTTAAG 1 cut(s) 680
VpaK11BI GGWCC 2 cut(s) 37, 145
XapI RAATTY 1 cut(s) 245
XbaI TCTAGA 5 cut(s) 202, 496, 871, 1009, 1036
XmaJI CCTAGG 1 cut(s) 674
XmiI GTMKAC 1 cut(s) 297
XmnI GAANNNNTTC 1 cut(s) 367
XspI CTAG 8 cut(s) 203, 497, 659, 675, 872, 894, 1010, 1037
Zsp2I ATGCAT 1 cut(s) 462
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.