FvH4_1g00860

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000062
Physical Location & Seq
Forward (+)
422313 .. 429219
6907 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g00860.t8

Sequence Viewer

Length: 1437 bp
ATGGGTTCACATTCAAAGCTCAAAGTAGGAGGAGATGGTGAAGACAAGATTAGTCAATTACCAGATGCAGTTCTGTCTCACATGCTCTCCTTCTTGCCAACCAAACATGCTGTGAGGACCAGCATTCTCTCTACAAGGTGGAAGAACATATGGGCTTCTGTTCCCACTCTAGACTTGGAACACTACTACTGTGATGAACGTAGGTCTCTTCATGCGGGGTTTGTGTCATCTATTGATCGTGTGCTTTACTGTGAATCATCAGACATTCAAAGATTTCGTCTCCATTATTACTGCCTTTCTGAGGATTTATCTCGTATTGATGGTTGGATCCGCACCGCTATTCGCCGTAATGTTGTTGAACTTGACCTTTGTGTTTGGGTACGGGGGGACAAGGTAGAAAAGATTGAGTTGCCTACAACTATCTTTCTGTGCAAAACATTGAAATTGAATCTGGAATCAAATTGTTTCATCTATGCTCCTCCTGAGTCGGGGTGTTTCCCCAATCTCAAGGTCCTCCATATCGGAGTCGATTGTCCTGATAAGGAGTTTATGGAAAAGCTTTTTACATTCTTCCCTTTACTTGAAGACTTGTCTATAGATGGAAGATTGTCAAGTGATATAAGTGGTACTTTCAAGCTTTTTGTGCCTGAACTAAAGAGGTTAAGAATAGACATTGACTCTGATCTGACTTTTGAGGACCCTTATGAGTACTACTTCTCTATCAATGCCCCAAAGCTTGAATTCGTTAACCTCAAAATGGATTTTTTGCCGAGCATTGTACTTGACAATGCAAAGTCCCTGGTGAAAGCCGTTTTGAGTTTCTCTCACCATGATGCCATTGAACACGAGCACTATGATGACCGTGCAACCACATTGCTGGCAGCAATTTCAAATGTTCAACATCTATCTCTTTCAGTTCATTCTTTGGATGCTTCTTGTATACCTGCTTTTGATAATCTGATCCATTTGAAGCTGGTTCTTCATGACTGCCATCACTGGGAAGTGCTGGCAGAGCTTCTCCATAGAACACCTAATCTAGAACGTCTTGTCTTGGAACATAATGGAGACGTGGACTGTGACTCAGAGCGCGAATTCGACTCACACGAGGAAAGATATTTCGCAAACAATCCAAACTCTGAGAATGAAGAAACTTCAGAGGATGAAGAAAACTACAAAGGATACTTGGAGCATCCTTGGTGGGAGTGTGAAAAGACTGCACCTGTTTGTTTGTTGTCACATCTCAAGATTATCGTCTTAAGGGGTTTCGGGGGAAGCAATGGTGAGAAGGAAGTGGCAAAGTATTTATTGAAGAATGGTAAAGTTTTGAAGAAGATGACGATTTATACGGGTGATTTTTTCTACTCGAAAGAGAAGTTTCACAATGCTTGTGCACTCTTTCGAAAGGGTTCGAAGACTTGTCGGGTTAAATTTATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

479

Amino Acids

55.06

Weight (kDa)

5.75

Isoelectric Point (pI)

40.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 17 - 55 2.1e-06 F-box domain
LRR_At5g56370 PF24758 106 - 202 5.2e-06 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 952
AccI GTMKAC 1 cut(s) 940
AccII CGCG 1 cut(s) 1089
AciI CCGC 3 cut(s) 215, 331, 336
AclWI GGATC 3 cut(s) 322, 335, 955
AcsI RAATTY 3 cut(s) 740, 1091, 1427
AcuI CTGAAG 1 cut(s) 1137
AfaI GTAC 4 cut(s) 381, 628, 710, 780
AfiI CCNNNNNNNGG 4 cut(s) 301, 488, 757, 997
AflII CTTAAG 1 cut(s) 1255
AjiI CACGTC 1 cut(s) 1069
AjnI CCWGG 1 cut(s) 798
AluBI AGCT 6 cut(s) 19, 559, 637, 736, 973, 1015
AluI AGCT 6 cut(s) 19, 559, 637, 736, 973, 1015
Alw21I GWGCWC 2 cut(s) 852, 1393
Alw26I GTCTC 4 cut(s) 81, 210, 284, 1059
Alw44I GTGCAC 1 cut(s) 1389
AlwI GGATC 3 cut(s) 322, 335, 955
ApaLI GTGCAC 1 cut(s) 1389
ApeKI GCWGC 1 cut(s) 881
ApoI RAATTY 3 cut(s) 740, 1091, 1427
ArsI GACNNNNNNTTYG 2 cut(s) 262, 294
Asp700I GAANNNNTTC 1 cut(s) 1405
AspLEI GCGC 1 cut(s) 1089
AspS9I GGNCC 3 cut(s) 117, 511, 697
AsuHPI GGTGA 5 cut(s) 50, 814, 818, 1292, 1361
AsuII TTCGAA 2 cut(s) 1399, 1409
AvaII GGWCC 3 cut(s) 117, 511, 697
BaeGI GKGCMC 1 cut(s) 1393
BamHI GGATCC 1 cut(s) 327
BauI CACGAG 2 cut(s) 845, 1103
BbsI GAAGAC 3 cut(s) 48, 591, 1418
Bbv12I GWGCWC 2 cut(s) 852, 1393
BbvI GCAGC 1 cut(s) 893
BccI CCATC 4 cut(s) 29, 314, 593, 999
BceAI ACGGC 2 cut(s) 330, 794
BciT130I CCWGG 1 cut(s) 800
BciVI GTATCC 1 cut(s) 1172
BcoDI GTCTC 4 cut(s) 81, 210, 284, 1059
BfaI CTAG 3 cut(s) 170, 1037, 1435
BfmI CTRYAG 1 cut(s) 594
BfrI CTTAAG 1 cut(s) 1255
BfuAI ACCTGC 1 cut(s) 952
BfuI GTATCC 1 cut(s) 1172
BisI GCNGC 1 cut(s) 882
BlsI GCNGC 1 cut(s) 883
BmcAI AGTACT 1 cut(s) 710
Bme1390I CCNGG 1 cut(s) 800
Bme18I GGWCC 3 cut(s) 117, 511, 697
BmgBI CACGTC 1 cut(s) 1069
BmgT120I GGNCC 3 cut(s) 117, 511, 697
BmiI GGNNCC 2 cut(s) 329, 699
BmrFI CCNGG 1 cut(s) 800
BmrI ACTGGG 1 cut(s) 1006
BmsI GCATC 4 cut(s) 55, 823, 919, 1198
BmuI ACTGGG 1 cut(s) 1006
BpiI GAAGAC 3 cut(s) 48, 591, 1418
BplI GAGNNNNNCTC 2 cut(s) 808, 840
Bpu14I TTCGAA 2 cut(s) 1399, 1409
BpuEI CTTGAG 2 cut(s) 491, 1226
BsaI GGTCTC 1 cut(s) 210
BsaJI CCNNGG 2 cut(s) 798, 1193
BsaXI ACNNNNNCTCC 2 cut(s) 71, 101
Bsc4I CCNNNNNNNGG 4 cut(s) 301, 488, 757, 997
Bse1I ACTGG 1 cut(s) 1001
Bse3DI GCAATG 2 cut(s) 872, 1282
BseBI CCWGG 1 cut(s) 800
BseDI CCNNGG 2 cut(s) 798, 1193
BseGI GGATG 3 cut(s) 934, 1165, 1189
BseLI CCNNNNNNNGG 4 cut(s) 301, 488, 757, 997
BseMI GCAATG 2 cut(s) 872, 1282
BseMII CTCAG 4 cut(s) 291, 474, 1095, 1128
BseNI ACTGG 1 cut(s) 1001
BseRI GAGGAG 2 cut(s) 45, 468
BseSI GKGCMC 1 cut(s) 1393
BseXI GCAGC 1 cut(s) 893
BsgI GTGCAG 1 cut(s) 1200
Bsh1236I CGCG 1 cut(s) 1089
BsiHKAI GWGCWC 2 cut(s) 852, 1393
BslFI GGGAC 2 cut(s) 401, 781
BslI CCNNNNNNNGG 4 cut(s) 301, 488, 757, 997
BsmAI GTCTC 4 cut(s) 81, 210, 284, 1059
BsmBI CGTCTC 2 cut(s) 284, 1059
BsmFI GGGAC 2 cut(s) 401, 781
BsmI GAATGC 1 cut(s) 123
Bso31I GGTCTC 1 cut(s) 210
Bsp119I TTCGAA 2 cut(s) 1399, 1409
Bsp1286I GDGCHC 2 cut(s) 852, 1393
Bsp143I GATC 4 cut(s) 235, 327, 682, 960
BspACI CCGC 3 cut(s) 215, 331, 336
BspCNI CTCAG 4 cut(s) 292, 475, 1094, 1129
BspFNI CGCG 1 cut(s) 1089
BspHI TCATGA 1 cut(s) 982
BspLI GGNNCC 2 cut(s) 329, 699
BspMI ACCTGC 1 cut(s) 952
BspPI GGATC 3 cut(s) 322, 335, 955
BspT104I TTCGAA 2 cut(s) 1399, 1409
BspTI CTTAAG 1 cut(s) 1255
BspTNI GGTCTC 1 cut(s) 210
BsrDI GCAATG 2 cut(s) 872, 1282
BsrI ACTGG 1 cut(s) 1001
BssECI CCNNGG 2 cut(s) 798, 1193
BssMI GATC 4 cut(s) 235, 327, 682, 960
BssNAI GTATAC 1 cut(s) 941
BssSI CACGAG 2 cut(s) 845, 1103
BssT1I CCWWGG 1 cut(s) 1193
Bst1107I GTATAC 1 cut(s) 941
Bst2BI CACGAG 2 cut(s) 845, 1103
Bst2UI CCWGG 1 cut(s) 800
Bst4CI ACNGT 4 cut(s) 191, 251, 863, 1076
Bst6I CTCTTC 1 cut(s) 213
BstAFI CTTAAG 1 cut(s) 1255
BstBI TTCGAA 2 cut(s) 1399, 1409
BstC8I GCNNGC 2 cut(s) 879, 1008
BstDEI CTNAG 4 cut(s) 300, 483, 1081, 1137
BstENI CCTNNNNNAGG 1 cut(s) 299
BstF5I GGATG 3 cut(s) 934, 1165, 1189
BstFNI CGCG 1 cut(s) 1089
BstHHI GCGC 1 cut(s) 1089
BstKTI GATC 4 cut(s) 238, 330, 685, 963
BstMAI GTCTC 4 cut(s) 81, 210, 284, 1059
BstMBI GATC 4 cut(s) 235, 327, 682, 960
BstMWI GCNNNNNNNGC 2 cut(s) 643, 1012
BstNI CCWGG 1 cut(s) 800
BstNSI RCATGY 2 cut(s) 85, 110
BstSCI CCNGG 1 cut(s) 798
BstSFI CTRYAG 1 cut(s) 594
BstSLI GKGCMC 1 cut(s) 1393
BstUI CGCG 1 cut(s) 1089
BstV1I GCAGC 1 cut(s) 893
BstV2I GAAGAC 3 cut(s) 48, 591, 1418
BstX2I RGATCY 1 cut(s) 327
BstXI CCANNNNNNTGG 1 cut(s) 877
BstYI RGATCY 1 cut(s) 327
BstZ17I GTATAC 1 cut(s) 941
BsuI GTATCC 1 cut(s) 1172
BtrI CACGTC 1 cut(s) 1069
BtsCI GGATG 3 cut(s) 934, 1165, 1189
BtsIMutI CAGTG 1 cut(s) 994
BveI ACCTGC 1 cut(s) 952
Cac8I GCNNGC 2 cut(s) 879, 1008
CciI TCATGA 1 cut(s) 982
CfoI GCGC 1 cut(s) 1089
Cfr13I GGNCC 3 cut(s) 117, 511, 697
Csp6I GTAC 4 cut(s) 380, 627, 709, 779
CviAII CATG 5 cut(s) 82, 107, 212, 830, 983
CviJI RGCY 8 cut(s) 19, 155, 559, 637, 736, 809, 973, 1015
CviKI_1 RGCY 8 cut(s) 19, 155, 559, 637, 736, 809, 973, 1015
CviQI GTAC 4 cut(s) 380, 627, 709, 779
DdeI CTNAG 4 cut(s) 300, 483, 1081, 1137
DpnI GATC 4 cut(s) 237, 329, 684, 962
DpnII GATC 4 cut(s) 235, 327, 682, 960
Eam1104I CTCTTC 1 cut(s) 213
EarI CTCTTC 1 cut(s) 213
Eco130I CCWWGG 1 cut(s) 1193
Eco31I GGTCTC 1 cut(s) 210
Eco47I GGWCC 3 cut(s) 117, 511, 697
Eco57I CTGAAG 1 cut(s) 1137
EcoNI CCTNNNNNAGG 1 cut(s) 299
EcoO109I RGGNCCY 2 cut(s) 511, 697
EcoRI GAATTC 2 cut(s) 740, 1091
EcoRII CCWGG 1 cut(s) 798
EcoT14I CCWWGG 1 cut(s) 1193
ErhI CCWWGG 1 cut(s) 1193
Esp3I CGTCTC 2 cut(s) 284, 1059
FaeI CATG 5 cut(s) 85, 110, 215, 833, 986
FalI AAGNNNNNCTT 2 cut(s) 613, 645
FaqI GGGAC 2 cut(s) 401, 781
FatI CATG 5 cut(s) 81, 106, 211, 829, 982
FauI CCCGC 1 cut(s) 208
FauNDI CATATG 1 cut(s) 149
FblI GTMKAC 1 cut(s) 940
Fnu4HI GCNGC 1 cut(s) 882
FokI GGATG 3 cut(s) 941, 1172, 1176
Fsp4HI GCNGC 1 cut(s) 882
FspBI CTAG 3 cut(s) 170, 1037, 1435
GlaI GCGC 1 cut(s) 1088
GluI GCNGC 1 cut(s) 882
HhaI GCGC 1 cut(s) 1089
Hin1II CATG 5 cut(s) 85, 110, 215, 833, 986
Hin6I GCGC 1 cut(s) 1087
HinP1I GCGC 1 cut(s) 1087
HincII GTYRAC 1 cut(s) 748
HindII GTYRAC 1 cut(s) 748
HindIII AAGCTT 3 cut(s) 557, 635, 734
HinfI GANTC 8 cut(s) 254, 448, 455, 485, 525, 677, 1079, 1097
HpaI GTTAAC 1 cut(s) 748
HphI GGTGA 5 cut(s) 50, 814, 818, 1292, 1361
Hpy166II GTNNAC 5 cut(s) 8, 748, 941, 1072, 1391
Hpy188I TCNGA 9 cut(s) 262, 301, 524, 682, 687, 960, 1084, 1138, 1156
Hpy188III TCNNGA 7 cut(s) 170, 452, 482, 536, 983, 1037, 1243
Hpy8I GTNNAC 5 cut(s) 8, 748, 941, 1072, 1391
HpyAV CCTTC 2 cut(s) 100, 1279
HpyCH4III ACNGT 4 cut(s) 191, 251, 863, 1076
HpyCH4IV ACGT 3 cut(s) 199, 1042, 1068
HpyCH4V TGCA 6 cut(s) 68, 432, 791, 866, 1217, 1391
HpyF10VI GCNNNNNNNGC 2 cut(s) 643, 1012
HpyF3I CTNAG 4 cut(s) 300, 483, 1081, 1137
HpySE526I ACGT 3 cut(s) 199, 1042, 1068
Hsp92II CATG 5 cut(s) 85, 110, 215, 833, 986
HspAI GCGC 1 cut(s) 1087
KspAI GTTAAC 1 cut(s) 748
Kzo9I GATC 4 cut(s) 235, 327, 682, 960
LmnI GCTCC 2 cut(s) 481, 1186
Lsp1109I GCAGC 1 cut(s) 893
LweI GCATC 4 cut(s) 55, 823, 919, 1198
MaeI CTAG 3 cut(s) 170, 1037, 1435
MaeII ACGT 3 cut(s) 199, 1042, 1068
MaeIII GTNAC 2 cut(s) 1076, 1233
MalI GATC 4 cut(s) 237, 329, 684, 962
MboI GATC 4 cut(s) 235, 327, 682, 960
MflI RGATCY 1 cut(s) 327
MhlI GDGCHC 2 cut(s) 852, 1393
MluCI AATT 7 cut(s) 56, 443, 460, 740, 885, 1091, 1427
MlyI GAGTC 5 cut(s) 494, 534, 671, 1073, 1091
MmeI TCCRAC 1 cut(s) 305
MroXI GAANNNNTTC 1 cut(s) 1405
MseI TTAA 4 cut(s) 662, 747, 1256, 1425
MslI CAYNNNNRTG 2 cut(s) 831, 855
MspCI CTTAAG 1 cut(s) 1255
MspR9I CCNGG 1 cut(s) 800
Mva1269I GAATGC 1 cut(s) 123
MvaI CCWGG 1 cut(s) 800
MvnI CGCG 1 cut(s) 1089
MwoI GCNNNNNNNGC 2 cut(s) 643, 1012
NdeI CATATG 1 cut(s) 149
NdeII GATC 4 cut(s) 235, 327, 682, 960
NlaIII CATG 5 cut(s) 85, 110, 215, 833, 986
NlaIV GGNNCC 2 cut(s) 329, 699
NmeAIII GCCGAG 1 cut(s) 795
NmuCI GTSAC 2 cut(s) 1076, 1233
NspI RCATGY 2 cut(s) 85, 110
NspV TTCGAA 2 cut(s) 1399, 1409
PagI TCATGA 1 cut(s) 982
PcsI WCGNNNNNNNCGW 1 cut(s) 1101
PctI GAATGC 1 cut(s) 123
PdmI GAANNNNTTC 1 cut(s) 1405
PfeI GAWTC 3 cut(s) 254, 448, 455
PkrI GCNGC 1 cut(s) 883
PleI GAGTC 5 cut(s) 493, 533, 671, 1073, 1091
PpsI GAGTC 5 cut(s) 493, 533, 671, 1073, 1091
PpuMI RGGWCCY 2 cut(s) 511, 697
Psp5II RGGWCCY 2 cut(s) 511, 697
Psp6I CCWGG 1 cut(s) 798
PspGI CCWGG 1 cut(s) 798
PspN4I GGNNCC 2 cut(s) 329, 699
PspPI GGNCC 3 cut(s) 117, 511, 697
PspPPI RGGWCCY 2 cut(s) 511, 697
PsuI RGATCY 1 cut(s) 327
RsaI GTAC 4 cut(s) 381, 628, 710, 780
RsaNI GTAC 4 cut(s) 380, 627, 709, 779
RseI CAYNNNNRTG 2 cut(s) 831, 855
SaqAI TTAA 4 cut(s) 662, 747, 1256, 1425
SatI GCNGC 1 cut(s) 882
Sau3AI GATC 4 cut(s) 235, 327, 682, 960
Sau96I GGNCC 3 cut(s) 117, 511, 697
ScaI AGTACT 1 cut(s) 710
SchI GAGTC 5 cut(s) 494, 534, 671, 1073, 1091
ScrFI CCNGG 1 cut(s) 800
SduI GDGCHC 2 cut(s) 852, 1393
SfaNI GCATC 4 cut(s) 55, 823, 919, 1198
SfcI CTRYAG 1 cut(s) 594
SfuI TTCGAA 2 cut(s) 1399, 1409
SinI GGWCC 3 cut(s) 117, 511, 697
SmiMI CAYNNNNRTG 2 cut(s) 831, 855
SmlI CTYRAG 3 cut(s) 506, 1241, 1255
SmoI CTYRAG 3 cut(s) 506, 1241, 1255
Sse9I AATT 7 cut(s) 56, 443, 460, 740, 885, 1091, 1427
SsiI CCGC 3 cut(s) 215, 331, 336
SspMI CTAG 3 cut(s) 170, 1037, 1435
StyD4I CCNGG 1 cut(s) 798
StyI CCWWGG 1 cut(s) 1193
TaaI ACNGT 4 cut(s) 191, 251, 863, 1076
TaiI ACGT 3 cut(s) 202, 1045, 1071
TaqI TCGA 5 cut(s) 528, 1095, 1364, 1399, 1409
TasI AATT 7 cut(s) 56, 443, 460, 740, 885, 1091, 1427
TatI WGTACW 2 cut(s) 708, 778
TfiI GAWTC 3 cut(s) 254, 448, 455
Tru1I TTAA 4 cut(s) 662, 747, 1256, 1425
Tru9I TTAA 4 cut(s) 662, 747, 1256, 1425
TscAI CASTG 1 cut(s) 1001
TseFI GTSAC 2 cut(s) 1076, 1233
TseI GCWGC 1 cut(s) 881
Tsp45I GTSAC 2 cut(s) 1076, 1233
TspDTI ATGAA 7 cut(s) 200, 210, 457, 908, 971, 1158, 1176
TspRI CASTG 1 cut(s) 1001
Vha464I CTTAAG 1 cut(s) 1255
VneI GTGCAC 1 cut(s) 1389
VpaK11BI GGWCC 3 cut(s) 117, 511, 697
XagI CCTNNNNNAGG 1 cut(s) 299
XapI RAATTY 3 cut(s) 740, 1091, 1427
XbaI TCTAGA 2 cut(s) 169, 1036
XceI RCATGY 2 cut(s) 85, 110
XcmI CCANNNNNNNNNTGG 1 cut(s) 172
XmiI GTMKAC 1 cut(s) 940
XmnI GAANNNNTTC 1 cut(s) 1405
XspI CTAG 3 cut(s) 170, 1037, 1435
ZrmI AGTACT 1 cut(s) 710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.