Rorug05G0107300

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000062
Physical Location & Seq
Reverse (-)
9507356 .. 9509792
2437 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0107300.1

Sequence Viewer

Length: 1218 bp
ATGCAACGAGTTCGATTGTCCTCTCAACAGGCGCCTGTACTCAAGCTAGGGGATTCTCAGATCACATTATCTCCAAAATTTAGGCTAGCGGTTATCCAATCTTCTTTGATGGATCCATCGTCGGAACTAGAGTTATCACTTAGGGGAGAACCCCTCATTCCTGGTCTACCTGATGATGTGGCGCTTAACTGTCTCCTTCGGCTTCCTGTGGAAAGCCACACAGCAAGCAAAGCTGTATGCAAGCGCTGGCATCTACTGCTTGGTAGTAAAGAGCGGTTTTTCACTCGTAGAAAAGAAGTAGGGTTTAAAGACCCGTGGCTTTTTGTCTTTGCATTCCACAAGTGCACTGGAAAGATTCAGTGGCAGGTTCTTGATCTCACTCATTTCTCGTGGCACACAATCCCTGCCATGCCTTGCAAAGACAAAGTTTGTCCCCATGGGTTCAGATGTGTTGCAATTCCCCATGAGGGCACTCTCTTTGTTTGTGGTGGTATGGTCTCTGATGTGGATTGTCCGCTGGATTTGGTCCTGAAATATGAAATGCAGAAGAATCGATGGACTGTGGTGAACCAGATGGTGAGTGCCAGGTCTTTTTTTGCAAGCGGAGTGATTGATGGGATGATTTATGTGGCTGGAGGAAACAGTGCAGATCTTTTTGAGCTCGACTCCGCTGAGGTTTTGGACCCTGCTGAAGGGAGTTGGCGTTCCATTGCGAGCATGGGAACAAATATGTCCTCTTATGATGCAGCAGTACTCGATGGAAAGCTTCTTGTTACGGAGGGCTGGTTGTGGCCTTTCTATGTTTCTCCTAGGGGTCAGGTTTATGATCCAAGAACTGATAATTGGGAGAGTATGGCTGTTGGACTCAGAGAGGGATGGACAGGTTCAAGTGTGGTGATTTACGGTCATTTGTTTGTGGTCTCAGAGCTTGAAAGAATGAAGCTTAAGGTTTATGACGCGGATACCGATTCCTGGGAACCAATAGAAGGCCTTCCTTTACCTGAGCAGATATGTAAACCCTTTGCAGTGAATTCTTGTGACTGCACAATATATGTCGTTGGTAGGAACCTTCATGTTGCTGTTGGTAACATCTCAAGGGTTAGCCGTAAAGGCTCTTCTGAGAACAAGTGGCACTTCAGTGTTCGATGGCATGTGGTTGATGCGCCAGATAATTTGTCTGACTTCACACCTTCAAGCTCACAGGTCCTCTTTGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

405

Amino Acids

45.29

Weight (kDa)

6.14

Isoelectric Point (pI)

46.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kelch_KLHDC2_KLHL20_DRC7 PF24681 122 - 287 9.6e-10 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Kelch_FKB95 PF25210 160 - 338 7.5e-19 FKB95, Kelch-repeats domain
Beta-prop_Calicin PF13964 161 - 284 1.3e-08 Calicin, beta-propeller domain
Kelch_1 PF01344 195 - 241 4.7e-10 Kelch motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 355
AccB1I GGYRCC 1 cut(s) 31
AccBSI CCGCTC 1 cut(s) 274
AccI GTMKAC 1 cut(s) 166
AccII CGCG 1 cut(s) 959
AciI CCGC 6 cut(s) 89, 274, 515, 603, 669, 959
AclWI GGATC 3 cut(s) 107, 120, 821
AcsI RAATTY 2 cut(s) 77, 1030
AcuI CTGAAG 2 cut(s) 711, 1120
AcyI GRCGYC 1 cut(s) 32
AfaI GTAC 2 cut(s) 39, 753
AfeI AGCGCT 1 cut(s) 245
AfiI CCNNNNNNNGG 4 cut(s) 467, 692, 972, 986
AflII CTTAAG 1 cut(s) 944
AgsI TTSAA 3 cut(s) 888, 932, 1194
AjnI CCWGG 3 cut(s) 160, 584, 971
AjuI GAANNNNNNNTTGG 2 cut(s) 826, 858
AleI CACNNNNGTG 1 cut(s) 1137
AloI GAACNNNNNNTCC 2 cut(s) 688, 720
AluBI AGCT 7 cut(s) 46, 233, 661, 766, 928, 943, 1197
AluI AGCT 7 cut(s) 46, 233, 661, 766, 928, 943, 1197
Alw21I GWGCWC 2 cut(s) 347, 663
Alw26I GTCTC 3 cut(s) 197, 502, 925
Alw44I GTGCAC 1 cut(s) 343
AlwI GGATC 3 cut(s) 107, 120, 821
Aor51HI AGCGCT 1 cut(s) 245
AoxI GGCC 2 cut(s) 791, 988
ApaLI GTGCAC 1 cut(s) 343
ApeKI GCWGC 1 cut(s) 746
ApoI RAATTY 2 cut(s) 77, 1030
Asp700I GAANNNNTTC 1 cut(s) 990
AspA2I CCTAGG 1 cut(s) 809
AspLEI GCGC 4 cut(s) 34, 184, 246, 1165
AspS9I GGNCC 3 cut(s) 526, 682, 1204
AsuHPI GGTGA 3 cut(s) 577, 589, 907
AsuNHI GCTAGC 1 cut(s) 85
AvaII GGWCC 3 cut(s) 526, 682, 1204
AvrII CCTAGG 1 cut(s) 809
BaeGI GKGCMC 2 cut(s) 347, 473
BamHI GGATCC 1 cut(s) 112
BanI GGYRCC 1 cut(s) 31
BanII GRGCYC 1 cut(s) 663
BarI GAAGNNNNNNTAC 2 cut(s) 1099, 1131
BauI CACGAG 1 cut(s) 388
Bbv12I GWGCWC 2 cut(s) 347, 663
BbvCI CCTCAGC 1 cut(s) 672
BbvI GCAGC 1 cut(s) 758
BccI CCATC 8 cut(s) 103, 124, 549, 568, 608, 752, 870, 1140
BceAI ACGGC 1 cut(s) 1089
BcgI CGANNNNNNTGC 3 cut(s) 27, 533, 567
BciT130I CCWGG 3 cut(s) 162, 586, 973
BciVI GTATCC 1 cut(s) 955
BcoDI GTCTC 3 cut(s) 197, 502, 925
BfaI CTAG 5 cut(s) 47, 86, 128, 810, 1216
BfoI RGCGCY 3 cut(s) 35, 185, 247
BfrI CTTAAG 1 cut(s) 944
BfuAI ACCTGC 1 cut(s) 355
BfuI GTATCC 1 cut(s) 955
BglI GCCNNNNNGGC 1 cut(s) 1110
BglII AGATCT 1 cut(s) 649
BisI GCNGC 1 cut(s) 747
BlnI CCTAGG 1 cut(s) 809
BlsI GCNGC 1 cut(s) 748
BmcAI AGTACT 1 cut(s) 753
Bme1390I CCNGG 3 cut(s) 162, 586, 973
Bme18I GGWCC 3 cut(s) 526, 682, 1204
BmgT120I GGNCC 3 cut(s) 526, 682, 1204
BmiI GGNNCC 5 cut(s) 33, 114, 684, 978, 1067
BmrFI CCNGG 3 cut(s) 162, 586, 973
BmsI GCATC 3 cut(s) 259, 733, 1150
BmtI GCTAGC 1 cut(s) 89
BplI GAGNNNNNCTC 4 cut(s) 138, 170, 650, 682
BpmI CTGGAG 1 cut(s) 654
Bpu10I CCTNAGC 2 cut(s) 672, 1002
BpuEI CTTGAG 2 cut(s) 26, 1078
Bsa29I ATCGAT 1 cut(s) 553
BsaHI GRCGYC 1 cut(s) 32
BsaI GGTCTC 2 cut(s) 502, 925
BsaJI CCNNGG 4 cut(s) 314, 436, 809, 972
BsaXI ACNNNNNCTCC 6 cut(s) 55, 85, 688, 718, 770, 800
Bsc4I CCNNNNNNNGG 4 cut(s) 467, 692, 972, 986
Bse1I ACTGG 1 cut(s) 352
Bse3DI GCAATG 1 cut(s) 708
BseBI CCWGG 3 cut(s) 162, 586, 973
BseCI ATCGAT 1 cut(s) 553
BseDI CCNNGG 4 cut(s) 314, 436, 809, 972
BseGI GGATG 2 cut(s) 624, 881
BseLI CCNNNNNNNGG 4 cut(s) 467, 692, 972, 986
BseMI GCAATG 1 cut(s) 708
BseMII CTCAG 6 cut(s) 71, 663, 880, 936, 993, 1110
BseNI ACTGG 1 cut(s) 352
BseSI GKGCMC 2 cut(s) 347, 473
BseXI GCAGC 1 cut(s) 758
BsgI GTGCAG 2 cut(s) 666, 1027
Bsh1236I CGCG 1 cut(s) 959
BshFI GGCC 2 cut(s) 793, 990
BshNI GGYRCC 1 cut(s) 31
BshVI ATCGAT 1 cut(s) 553
BsiHKAI GWGCWC 2 cut(s) 347, 663
BslFI GGGAC 1 cut(s) 417
BslI CCNNNNNNNGG 4 cut(s) 467, 692, 972, 986
BsmAI GTCTC 3 cut(s) 197, 502, 925
BsmFI GGGAC 1 cut(s) 417
BsmI GAATGC 1 cut(s) 332
BsnI GGCC 2 cut(s) 793, 990
Bso31I GGTCTC 2 cut(s) 502, 925
Bsp1286I GDGCHC 3 cut(s) 347, 473, 663
Bsp143I GATC 5 cut(s) 60, 112, 373, 649, 826
Bsp19I CCATGG 1 cut(s) 436
BspACI CCGC 6 cut(s) 89, 274, 515, 603, 669, 959
BspANI GGCC 2 cut(s) 793, 990
BspCNI CTCAG 6 cut(s) 70, 664, 879, 935, 994, 1111
BspDI ATCGAT 1 cut(s) 553
BspFNI CGCG 1 cut(s) 959
BspLI GGNNCC 5 cut(s) 33, 114, 684, 978, 1067
BspMI ACCTGC 1 cut(s) 355
BspOI GCTAGC 1 cut(s) 89
BspPI GGATC 3 cut(s) 107, 120, 821
BspQI GCTCTTC 1 cut(s) 1120
BspT107I GGYRCC 1 cut(s) 31
BspTI CTTAAG 1 cut(s) 944
BspTNI GGTCTC 2 cut(s) 502, 925
BsrBI CCGCTC 1 cut(s) 274
BsrDI GCAATG 1 cut(s) 708
BsrI ACTGG 1 cut(s) 352
BssECI CCNNGG 4 cut(s) 314, 436, 809, 972
BssMI GATC 5 cut(s) 60, 112, 373, 649, 826
BssNI GRCGYC 1 cut(s) 32
BssSI CACGAG 1 cut(s) 388
BssT1I CCWWGG 2 cut(s) 436, 809
Bst2BI CACGAG 1 cut(s) 388
Bst2UI CCWGG 3 cut(s) 162, 586, 973
Bst4CI ACNGT 4 cut(s) 191, 562, 644, 905
Bst6I CTCTTC 1 cut(s) 1120
BstACI GRCGYC 1 cut(s) 32
BstAFI CTTAAG 1 cut(s) 944
BstAPI GCANNNNNTGC 1 cut(s) 256
BstC8I GCNNGC 6 cut(s) 87, 226, 242, 248, 601, 715
BstDEI CTNAG 7 cut(s) 57, 140, 672, 866, 922, 1002, 1119
BstDSI CCRYGG 2 cut(s) 314, 436
BstENI CCTNNNNNAGG 1 cut(s) 690
BstF5I GGATG 2 cut(s) 624, 881
BstFNI CGCG 1 cut(s) 959
BstH2I RGCGCY 3 cut(s) 35, 185, 247
BstHHI GCGC 4 cut(s) 34, 184, 246, 1165
BstKTI GATC 5 cut(s) 63, 115, 376, 652, 829
BstMAI GTCTC 3 cut(s) 197, 502, 925
BstMBI GATC 5 cut(s) 60, 112, 373, 649, 826
BstMWI GCNNNNNNNGC 3 cut(s) 230, 256, 1110
BstNI CCWGG 3 cut(s) 162, 586, 973
BstNSI RCATGY 1 cut(s) 1154
BstSCI CCNGG 3 cut(s) 160, 584, 971
BstSLI GKGCMC 2 cut(s) 347, 473
BstUI CGCG 1 cut(s) 959
BstV1I GCAGC 1 cut(s) 758
BstX2I RGATCY 2 cut(s) 112, 649
BstYI RGATCY 2 cut(s) 112, 649
Bsu15I ATCGAT 1 cut(s) 553
BsuI GTATCC 1 cut(s) 955
BsuRI GGCC 2 cut(s) 793, 990
BsuTUI ATCGAT 1 cut(s) 553
BtgI CCRYGG 2 cut(s) 314, 436
BtsCI GGATG 2 cut(s) 624, 881
BtsI GCAGTG 1 cut(s) 1032
BtsIMutI CAGTG 5 cut(s) 345, 365, 649, 1032, 1144
BveI ACCTGC 1 cut(s) 355
Cac8I GCNNGC 6 cut(s) 87, 226, 242, 248, 601, 715
CfoI GCGC 4 cut(s) 34, 184, 246, 1165
Cfr13I GGNCC 3 cut(s) 526, 682, 1204
ClaI ATCGAT 1 cut(s) 553
CseI GACGC 1 cut(s) 965
Csp6I GTAC 2 cut(s) 38, 752
CviAII CATG 6 cut(s) 409, 437, 464, 718, 1073, 1151
CviQI GTAC 2 cut(s) 38, 752
DdeI CTNAG 7 cut(s) 57, 140, 672, 866, 922, 1002, 1119
DinI GGCGCC 1 cut(s) 33
DpnI GATC 5 cut(s) 62, 114, 375, 651, 828
DpnII GATC 5 cut(s) 60, 112, 373, 649, 826
DraI TTTAAA 1 cut(s) 307
Eam1104I CTCTTC 1 cut(s) 1120
EarI CTCTTC 1 cut(s) 1120
Ecl136II GAGCTC 1 cut(s) 661
Eco130I CCWWGG 2 cut(s) 436, 809
Eco147I AGGCCT 1 cut(s) 990
Eco24I GRGCYC 1 cut(s) 663
Eco31I GGTCTC 2 cut(s) 502, 925
Eco47I GGWCC 3 cut(s) 526, 682, 1204
Eco47III AGCGCT 1 cut(s) 245
Eco53kI GAGCTC 1 cut(s) 661
Eco57I CTGAAG 2 cut(s) 711, 1120
EcoICRI GAGCTC 1 cut(s) 661
EcoNI CCTNNNNNAGG 1 cut(s) 690
EcoO109I RGGNCCY 1 cut(s) 1204
EcoRI GAATTC 1 cut(s) 1030
EcoRII CCWGG 3 cut(s) 160, 584, 971
EcoT14I CCWWGG 2 cut(s) 436, 809
EcoT38I GRGCYC 1 cut(s) 663
EgeI GGCGCC 1 cut(s) 33
EheI GGCGCC 1 cut(s) 33
ErhI CCWWGG 2 cut(s) 436, 809
FaeI CATG 6 cut(s) 412, 440, 467, 721, 1076, 1154
FalI AAGNNNNNCTT 2 cut(s) 1118, 1150
FaqI GGGAC 1 cut(s) 417
FatI CATG 6 cut(s) 408, 436, 463, 717, 1072, 1150
FblI GTMKAC 1 cut(s) 166
Fnu4HI GCNGC 1 cut(s) 747
FokI GGATG 2 cut(s) 631, 888
FriOI GRGCYC 1 cut(s) 663
Fsp4HI GCNGC 1 cut(s) 747
FspBI CTAG 5 cut(s) 47, 86, 128, 810, 1216
GlaI GCGC 4 cut(s) 33, 183, 245, 1164
GluI GCNGC 1 cut(s) 747
GsuI CTGGAG 1 cut(s) 654
HaeII RGCGCY 3 cut(s) 35, 185, 247
HaeIII GGCC 2 cut(s) 793, 990
HgaI GACGC 1 cut(s) 965
HhaI GCGC 4 cut(s) 34, 184, 246, 1165
Hin1I GRCGYC 1 cut(s) 32
Hin1II CATG 6 cut(s) 412, 440, 467, 721, 1076, 1154
Hin6I GCGC 4 cut(s) 32, 182, 244, 1163
HinP1I GCGC 4 cut(s) 32, 182, 244, 1163
HindIII AAGCTT 2 cut(s) 764, 941
HinfI GANTC 6 cut(s) 53, 355, 550, 665, 864, 968
HphI GGTGA 3 cut(s) 577, 589, 907
Hpy166II GTNNAC 4 cut(s) 167, 345, 568, 1016
Hpy188I TCNGA 8 cut(s) 60, 124, 446, 502, 869, 925, 1120, 1180
Hpy188III TCNNGA 2 cut(s) 371, 529
Hpy8I GTNNAC 4 cut(s) 167, 345, 568, 1016
Hpy99I CGWCG 1 cut(s) 124
HpyAV CCTTC 6 cut(s) 206, 686, 980, 1001, 1079, 1200
HpyCH4III ACNGT 4 cut(s) 191, 562, 644, 905
HpyF10VI GCNNNNNNNGC 3 cut(s) 230, 256, 1110
HpyF3I CTNAG 7 cut(s) 57, 140, 672, 866, 922, 1002, 1119
Hsp92I GRCGYC 1 cut(s) 32
Hsp92II CATG 6 cut(s) 412, 440, 467, 721, 1076, 1154
HspAI GCGC 4 cut(s) 32, 182, 244, 1163
KasI GGCGCC 1 cut(s) 31
Kzo9I GATC 5 cut(s) 60, 112, 373, 649, 826
LguI GCTCTTC 1 cut(s) 1120
Lsp1109I GCAGC 1 cut(s) 758
LweI GCATC 3 cut(s) 259, 733, 1150
MaeI CTAG 5 cut(s) 47, 86, 128, 810, 1216
MaeIII GTNAC 3 cut(s) 772, 1037, 1085
MalI GATC 5 cut(s) 62, 114, 375, 651, 828
MbiI CCGCTC 1 cut(s) 274
MboI GATC 5 cut(s) 60, 112, 373, 649, 826
MboII GAAGA 3 cut(s) 93, 559, 1107
MflI RGATCY 2 cut(s) 112, 649
MhlI GDGCHC 3 cut(s) 347, 473, 663
MluCI AATT 5 cut(s) 77, 456, 841, 1030, 1171
Mly113I GGCGCC 1 cut(s) 32
MlyI GAGTC 2 cut(s) 659, 858
MmeI TCCRAC 2 cut(s) 102, 841
MnlI CCTC 9 cut(s) 31, 164, 460, 629, 667, 745, 772, 865, 1217
MroXI GAANNNNTTC 1 cut(s) 990
MseI TTAA 3 cut(s) 186, 306, 945
MslI CAYNNNNRTG 1 cut(s) 1137
MspA1I CMGCKG 2 cut(s) 517, 671
MspCI CTTAAG 1 cut(s) 944
MspR9I CCNGG 3 cut(s) 162, 586, 973
Mva1269I GAATGC 1 cut(s) 332
MvaI CCWGG 3 cut(s) 162, 586, 973
MvnI CGCG 1 cut(s) 959
MwoI GCNNNNNNNGC 3 cut(s) 230, 256, 1110
NarI GGCGCC 1 cut(s) 32
NcoI CCATGG 1 cut(s) 436
NdeII GATC 5 cut(s) 60, 112, 373, 649, 826
NheI GCTAGC 1 cut(s) 85
NlaIII CATG 6 cut(s) 412, 440, 467, 721, 1076, 1154
NlaIV GGNNCC 5 cut(s) 33, 114, 684, 978, 1067
NmuCI GTSAC 1 cut(s) 1037
NspI RCATGY 1 cut(s) 1154
OliI CACNNNNGTG 1 cut(s) 1137
PceI AGGCCT 1 cut(s) 990
PciSI GCTCTTC 1 cut(s) 1120
PcsI WCGNNNNNNNCGW 1 cut(s) 963
PctI GAATGC 1 cut(s) 332
PdmI GAANNNNTTC 1 cut(s) 990
PfeI GAWTC 4 cut(s) 53, 355, 550, 968
PkrI GCNGC 1 cut(s) 748
PleI GAGTC 2 cut(s) 659, 858
PluTI GGCGCC 1 cut(s) 35
PpsI GAGTC 2 cut(s) 659, 858
PpuMI RGGWCCY 1 cut(s) 1204
Psp124BI GAGCTC 1 cut(s) 663
Psp5II RGGWCCY 1 cut(s) 1204
Psp6I CCWGG 3 cut(s) 160, 584, 971
PspGI CCWGG 3 cut(s) 160, 584, 971
PspN4I GGNNCC 5 cut(s) 33, 114, 684, 978, 1067
PspPI GGNCC 3 cut(s) 526, 682, 1204
PspPPI RGGWCCY 1 cut(s) 1204
PsuI RGATCY 2 cut(s) 112, 649
RsaI GTAC 2 cut(s) 39, 753
RsaNI GTAC 2 cut(s) 38, 752
RseI CAYNNNNRTG 1 cut(s) 1137
SacI GAGCTC 1 cut(s) 663
SapI GCTCTTC 1 cut(s) 1120
SaqAI TTAA 3 cut(s) 186, 306, 945
SatI GCNGC 1 cut(s) 747
Sau3AI GATC 5 cut(s) 60, 112, 373, 649, 826
Sau96I GGNCC 3 cut(s) 526, 682, 1204
ScaI AGTACT 1 cut(s) 753
SchI GAGTC 2 cut(s) 659, 858
ScrFI CCNGG 3 cut(s) 162, 586, 973
SduI GDGCHC 3 cut(s) 347, 473, 663
SfaNI GCATC 3 cut(s) 259, 733, 1150
SfoI GGCGCC 1 cut(s) 33
SinI GGWCC 3 cut(s) 526, 682, 1204
SmiMI CAYNNNNRTG 1 cut(s) 1137
SmlI CTYRAG 3 cut(s) 41, 944, 1093
SmoI CTYRAG 3 cut(s) 41, 944, 1093
Sse9I AATT 5 cut(s) 77, 456, 841, 1030, 1171
SseBI AGGCCT 1 cut(s) 990
SsiI CCGC 6 cut(s) 89, 274, 515, 603, 669, 959
SspDI GGCGCC 1 cut(s) 31
SspMI CTAG 5 cut(s) 47, 86, 128, 810, 1216
SstI GAGCTC 1 cut(s) 663
StuI AGGCCT 1 cut(s) 990
StyD4I CCNGG 3 cut(s) 160, 584, 971
StyI CCWWGG 2 cut(s) 436, 809
TaaI ACNGT 4 cut(s) 191, 562, 644, 905
TaqI TCGA 5 cut(s) 13, 553, 663, 756, 1144
TasI AATT 5 cut(s) 77, 456, 841, 1030, 1171
TatI WGTACW 2 cut(s) 37, 751
TfiI GAWTC 4 cut(s) 53, 355, 550, 968
Tru1I TTAA 3 cut(s) 186, 306, 945
Tru9I TTAA 3 cut(s) 186, 306, 945
TscAI CASTG 5 cut(s) 352, 365, 649, 1032, 1144
TseFI GTSAC 1 cut(s) 1037
TseI GCWGC 1 cut(s) 746
Tsp45I GTSAC 1 cut(s) 1037
TspDTI ATGAA 3 cut(s) 552, 953, 1061
TspGWI ACGGA 1 cut(s) 791
TspRI CASTG 5 cut(s) 352, 365, 649, 1032, 1144
Vha464I CTTAAG 1 cut(s) 944
VneI GTGCAC 1 cut(s) 343
VpaK11BI GGWCC 3 cut(s) 526, 682, 1204
XagI CCTNNNNNAGG 1 cut(s) 690
XapI RAATTY 2 cut(s) 77, 1030
XceI RCATGY 1 cut(s) 1154
XcmI CCANNNNNNNNNTGG 2 cut(s) 344, 715
XmaJI CCTAGG 1 cut(s) 809
XmiI GTMKAC 1 cut(s) 166
XmnI GAANNNNTTC 1 cut(s) 990
XspI CTAG 5 cut(s) 47, 86, 128, 810, 1216
ZrmI AGTACT 1 cut(s) 753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.