Rh7DG445200

domain in FBox and BRCT domain containing plant proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000062
Physical Location & Seq
Reverse (-)
63170628 .. 63172273
1646 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG445200.1

Sequence Viewer

Length: 1347 bp
ATGGCTTCGAATTCCAAGAGTCAATTACGAGTTACAGATAGAATCAGTGACTTACCAGATTCACTTCTTTGTCACATCCTTTCCTTTATTCCAACAAAGTACTCTGTAAGCACCAGCATTTTGTCTGCAAGGTGGAAGAGAGTCTGGGCCTCTGTTCCCTGTCTAGAGTTTTATGACGGACTTTTTCTGGACTTTGAAAGTTTTGTGTTGTTTGTTAGTCGTGTACTTTACTTTCATAACTCATCAAACATTCAAAAGTTCAAACTAGAATGCTACAATGCTGAGTGTTTCTTTCATATTGATGGTTGGATTCGCACTGCCATTATGCATAATCTTGTTGAACTTGATCTTTGTGTTGAAAAAGATGGATCACATTCAGAGGACGAGTGTCTCGAGTTGCCTAAGAGCCTTTTCATGTGCAAAACACTGGTTGTTTTGAAACTGCAGTCAACTTTTGTCATCAATACTCCTACTTCATGGTGTTTGTCATGTCTCAAGGTTCTGTTCATTACAGTTTATCATCCTGATAATGACCCGATGGAAAAGCTTTTGCCTGGCTGCCCTGCACTTGAAGATTTGGCTATATCTGGAACTGTGGGAGAAGGTTATTTGAATTTCAACATCTCTGCGCTTGAACTTAAGAAGTTAAGAATCAATCTTGACACTGTAGAAGCTTATAGTTTGGCTGATTATAATGATCTCAACATTTTTGTTAGAGCTCCAAAGCTCGAATACTTTGGTCTCAAGCAGACCGCTTTGTCAAATTGTGTTTTGGAGAATTCGAAGTCTTTAGTCAAAGCCACTATTGATCTCAATTACCACACAGCAACTGAACATTCTGGCTTTGCTGGCCGTGCGACTGCACTTTTGGCACAAATTTGCAATGTCAAATCTTTGTCCCTTGCAGCACATGGTTTGGATGAGAATTGTGATCTGCCTGTTTTTGGTAATTTGAACCAATTGAGACTGGTTCTTCATCGTTGCTGTTCTTGGTGGGCAGAGTTGCTGAAGAGATCACCTAATCTAGAATCTCTTGTCTTAGAACACGACGTCTATAATTGTGATGGAATAGCGGATTATGGTTTTGAAAAGATGGAGCTACTTTGGCATCCTCCTGAGTTGGTGCCAAATTGTTTGTTGTCACACGTCAAGACTATCTGTATCAAAAGATTCCTGGGAAGGGACGACGACTTTGAAGTGGCAAAATATTTGTTAAAGAATGCTAAAGTTTTGAATAGCATGAAAATTTACACAGGTGACTTTTTTGTGTGTACAAAGGAGGATATGTTGGAGAAACTTTTAATGTTTGAAAGGGGTTCTAAGACATGTCAAGTTGAAATTGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

448

Amino Acids

50.87

Weight (kDa)

5.66

Isoelectric Point (pI)

38.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 54 3e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 76 - 418 2.2e-10 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 100 - 252 3.2e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 372 - 416 6e-14 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 693
AasI GACNNNNNNGTC 1 cut(s) 757
AatII GACGTC 1 cut(s) 1053
AccB1I GGYRCC 1 cut(s) 1123
AciI CCGC 2 cut(s) 753, 1073
AclWI GGATC 1 cut(s) 376
AcoI YGGCCR 1 cut(s) 850
AcsI RAATTY 5 cut(s) 10, 613, 778, 876, 1245
AcuI CTGAAG 1 cut(s) 1028
AcyI GRCGYC 1 cut(s) 1050
AfaI GTAC 3 cut(s) 101, 225, 1273
AfiI CCNNNNNNNGG 2 cut(s) 944, 1180
AflII CTTAAG 1 cut(s) 638
AflIII ACRYGT 2 cut(s) 1144, 1325
AjiI CACGTC 1 cut(s) 1147
AjnI CCWGG 2 cut(s) 553, 1173
AluBI AGCT 5 cut(s) 547, 674, 719, 727, 1099
AluI AGCT 5 cut(s) 547, 674, 719, 727, 1099
Alw21I GWGCWC 1 cut(s) 721
Alw26I GTCTC 4 cut(s) 395, 497, 746, 958
AlwI GGATC 1 cut(s) 376
AlwNI CAGNNNCTG 1 cut(s) 830
Ama87I CYCGRG 1 cut(s) 392
AoxI GGCC 2 cut(s) 147, 850
ApeKI GCWGC 2 cut(s) 558, 905
ApoI RAATTY 5 cut(s) 10, 613, 778, 876, 1245
ArsI GACNNNNNNTTYG 4 cut(s) 850, 882, 1175, 1207
AspLEI GCGC 1 cut(s) 631
AspS9I GGNCC 1 cut(s) 147
AsuHPI GGTGA 2 cut(s) 1008, 1268
AsuII TTCGAA 2 cut(s) 8, 782
AvaI CYCGRG 1 cut(s) 392
BanI GGYRCC 1 cut(s) 1123
BanII GRGCYC 1 cut(s) 721
Bbv12I GWGCWC 1 cut(s) 721
BbvI GCAGC 2 cut(s) 545, 917
BccI CCATC 5 cut(s) 296, 359, 532, 1058, 1087
BceAI ACGGC 1 cut(s) 837
BciT130I CCWGG 2 cut(s) 555, 1175
BcoDI GTCTC 4 cut(s) 395, 497, 746, 958
BfaI CTAG 3 cut(s) 164, 266, 1025
BfmI CTRYAG 2 cut(s) 443, 666
BfrI CTTAAG 1 cut(s) 638
BisI GCNGC 2 cut(s) 559, 906
BlsI GCNGC 2 cut(s) 560, 907
BmcAI AGTACT 1 cut(s) 101
Bme1390I CCNGG 2 cut(s) 555, 1175
BmeT110I CYCGRG 1 cut(s) 392
BmgBI CACGTC 1 cut(s) 1147
BmgT120I GGNCC 1 cut(s) 147
BmiI GGNNCC 1 cut(s) 1125
BmrFI CCNGG 2 cut(s) 555, 1175
BmsI GCATC 1 cut(s) 1117
BoxI GACNNNNGTC 1 cut(s) 387
Bpu14I TTCGAA 2 cut(s) 8, 782
BpuEI CTTGAG 2 cut(s) 479, 728
BsaHI GRCGYC 1 cut(s) 1050
BsaI GGTCTC 1 cut(s) 746
BsaJI CCNNGG 1 cut(s) 1174
BsaXI ACNNNNNCTCC 2 cut(s) 1271, 1301
Bsc4I CCNNNNNNNGG 2 cut(s) 944, 1180
Bse1I ACTGG 2 cut(s) 432, 972
Bse3DI GCAATG 1 cut(s) 889
BseBI CCWGG 2 cut(s) 555, 1175
BseDI CCNNGG 1 cut(s) 1174
BseGI GGATG 4 cut(s) 75, 520, 925, 1108
BseLI CCNNNNNNNGG 2 cut(s) 944, 1180
BseMI GCAATG 1 cut(s) 889
BseMII CTCAG 2 cut(s) 273, 1107
BseNI ACTGG 2 cut(s) 432, 972
BseXI GCAGC 2 cut(s) 545, 917
BsgI GTGCAG 2 cut(s) 549, 846
BshFI GGCC 2 cut(s) 149, 852
BshNI GGYRCC 1 cut(s) 1123
BsiHKAI GWGCWC 1 cut(s) 721
BsiHKCI CYCGRG 1 cut(s) 392
BslFI GGGAC 2 cut(s) 883, 1196
BslI CCNNNNNNNGG 2 cut(s) 944, 1180
BsmAI GTCTC 4 cut(s) 395, 497, 746, 958
BsmFI GGGAC 2 cut(s) 883, 1196
BsmI GAATGC 2 cut(s) 275, 1225
BsnI GGCC 2 cut(s) 149, 852
Bso31I GGTCTC 1 cut(s) 746
BsoBI CYCGRG 1 cut(s) 392
Bsp119I TTCGAA 2 cut(s) 8, 782
Bsp1286I GDGCHC 1 cut(s) 721
Bsp1407I TGTACA 1 cut(s) 1271
Bsp143I GATC 6 cut(s) 346, 368, 697, 808, 931, 1013
BspACI CCGC 2 cut(s) 753, 1073
BspANI GGCC 2 cut(s) 149, 852
BspCNI CTCAG 2 cut(s) 274, 1108
BspLI GGNNCC 1 cut(s) 1125
BspMAI CTGCAG 1 cut(s) 447
BspPI GGATC 1 cut(s) 376
BspT104I TTCGAA 2 cut(s) 8, 782
BspT107I GGYRCC 1 cut(s) 1123
BspTI CTTAAG 1 cut(s) 638
BspTNI GGTCTC 1 cut(s) 746
BsrDI GCAATG 1 cut(s) 889
BsrGI TGTACA 1 cut(s) 1271
BsrI ACTGG 2 cut(s) 432, 972
BssECI CCNNGG 1 cut(s) 1174
BssMI GATC 6 cut(s) 346, 368, 697, 808, 931, 1013
BssNI GRCGYC 1 cut(s) 1050
Bst2UI CCWGG 2 cut(s) 555, 1175
Bst4CI ACNGT 3 cut(s) 514, 595, 667
Bst6I CTCTTC 2 cut(s) 131, 1004
BstACI GRCGYC 1 cut(s) 1050
BstAFI CTTAAG 1 cut(s) 638
BstAUI TGTACA 1 cut(s) 1271
BstBI TTCGAA 2 cut(s) 8, 782
BstC8I GCNNGC 1 cut(s) 850
BstDEI CTNAG 5 cut(s) 282, 402, 1039, 1116, 1320
BstF5I GGATG 4 cut(s) 75, 520, 925, 1108
BstHHI GCGC 1 cut(s) 631
BstKTI GATC 6 cut(s) 349, 371, 700, 811, 934, 1016
BstMAI GTCTC 4 cut(s) 395, 497, 746, 958
BstMBI GATC 6 cut(s) 346, 368, 697, 808, 931, 1013
BstMWI GCNNNNNNNGC 4 cut(s) 849, 854, 869, 1105
BstNI CCWGG 2 cut(s) 555, 1175
BstNSI RCATGY 1 cut(s) 1329
BstPAI GACNNNNGTC 1 cut(s) 387
BstSCI CCNGG 2 cut(s) 553, 1173
BstSFI CTRYAG 2 cut(s) 443, 666
BstV1I GCAGC 2 cut(s) 545, 917
BsuRI GGCC 2 cut(s) 149, 852
BtrI CACGTC 1 cut(s) 1147
BtsCI GGATG 4 cut(s) 75, 520, 925, 1108
BtsI GCAGTG 1 cut(s) 315
BtsIMutI CAGTG 4 cut(s) 52, 315, 425, 663
Cac8I GCNNGC 1 cut(s) 850
CaiI CAGNNNCTG 1 cut(s) 830
CfoI GCGC 1 cut(s) 631
Cfr13I GGNCC 1 cut(s) 147
Csp6I GTAC 3 cut(s) 100, 224, 1272
CviAII CATG 6 cut(s) 415, 477, 489, 911, 1240, 1326
CviQI GTAC 3 cut(s) 100, 224, 1272
DdeI CTNAG 5 cut(s) 282, 402, 1039, 1116, 1320
DpnI GATC 6 cut(s) 348, 370, 699, 810, 933, 1015
DpnII GATC 6 cut(s) 346, 368, 697, 808, 931, 1013
DrdI GACNNNNNNGTC 1 cut(s) 757
DseDI GACNNNNNNGTC 1 cut(s) 757
EaeI YGGCCR 1 cut(s) 850
Eam1104I CTCTTC 2 cut(s) 131, 1004
EarI CTCTTC 2 cut(s) 131, 1004
Ecl136II GAGCTC 1 cut(s) 719
Eco24I GRGCYC 1 cut(s) 721
Eco31I GGTCTC 1 cut(s) 746
Eco53kI GAGCTC 1 cut(s) 719
Eco57I CTGAAG 1 cut(s) 1028
Eco88I CYCGRG 1 cut(s) 392
EcoICRI GAGCTC 1 cut(s) 719
EcoRI GAATTC 2 cut(s) 10, 778
EcoRII CCWGG 2 cut(s) 553, 1173
EcoT22I ATGCAT 1 cut(s) 330
EcoT38I GRGCYC 1 cut(s) 721
FaeI CATG 6 cut(s) 418, 480, 492, 914, 1243, 1329
FaqI GGGAC 2 cut(s) 883, 1196
FatI CATG 6 cut(s) 414, 476, 488, 910, 1239, 1325
Fnu4HI GCNGC 2 cut(s) 559, 906
FokI GGATG 4 cut(s) 62, 507, 932, 1095
FriOI GRGCYC 1 cut(s) 721
Fsp4HI GCNGC 2 cut(s) 559, 906
FspBI CTAG 3 cut(s) 164, 266, 1025
GlaI GCGC 1 cut(s) 630
GluI GCNGC 2 cut(s) 559, 906
HaeIII GGCC 2 cut(s) 149, 852
HhaI GCGC 1 cut(s) 631
Hin1I GRCGYC 1 cut(s) 1050
Hin1II CATG 6 cut(s) 418, 480, 492, 914, 1243, 1329
Hin6I GCGC 1 cut(s) 629
HinP1I GCGC 1 cut(s) 629
HincII GTYRAC 1 cut(s) 450
HindII GTYRAC 1 cut(s) 450
HindIII AAGCTT 2 cut(s) 545, 672
HinfI GANTC 8 cut(s) 19, 42, 59, 141, 310, 651, 1028, 1170
HphI GGTGA 2 cut(s) 1008, 1268
Hpy166II GTNNAC 3 cut(s) 224, 450, 1272
Hpy188I TCNGA 1 cut(s) 379
Hpy188III TCNNGA 9 cut(s) 164, 188, 392, 524, 588, 659, 1025, 1115, 1150
Hpy8I GTNNAC 3 cut(s) 224, 450, 1272
Hpy99I CGWCG 2 cut(s) 1052, 1190
HpyAV CCTTC 2 cut(s) 596, 1173
HpyCH4III ACNGT 3 cut(s) 514, 595, 667
HpyCH4IV ACGT 2 cut(s) 1050, 1146
HpyCH4V TGCA 8 cut(s) 128, 328, 420, 445, 566, 863, 882, 905
HpyF10VI GCNNNNNNNGC 4 cut(s) 849, 854, 869, 1105
HpyF3I CTNAG 5 cut(s) 282, 402, 1039, 1116, 1320
HpySE526I ACGT 2 cut(s) 1050, 1146
Hsp92I GRCGYC 1 cut(s) 1050
Hsp92II CATG 6 cut(s) 418, 480, 492, 914, 1243, 1329
HspAI GCGC 1 cut(s) 629
Kzo9I GATC 6 cut(s) 346, 368, 697, 808, 931, 1013
LmnI GCTCC 2 cut(s) 724, 1096
Lsp1109I GCAGC 2 cut(s) 545, 917
LweI GCATC 1 cut(s) 1117
MaeI CTAG 3 cut(s) 164, 266, 1025
MaeII ACGT 2 cut(s) 1050, 1146
MaeIII GTNAC 5 cut(s) 31, 47, 71, 1140, 1256
MalI GATC 6 cut(s) 348, 370, 699, 810, 933, 1015
MboI GATC 6 cut(s) 346, 368, 697, 808, 931, 1013
MboII GAAGA 4 cut(s) 148, 584, 965, 1021
MfeI CAATTG 1 cut(s) 959
MhlI GDGCHC 1 cut(s) 721
MlyI GAGTC 2 cut(s) 28, 150
MmeI TCCRAC 3 cut(s) 116, 287, 1269
MnlI CCTC 4 cut(s) 160, 373, 1122, 1273
Mph1103I ATGCAT 1 cut(s) 330
MseI TTAA 4 cut(s) 639, 647, 1214, 1301
MslI CAYNNNNRTG 1 cut(s) 300
MspCI CTTAAG 1 cut(s) 638
MspR9I CCNGG 2 cut(s) 555, 1175
MunI CAATTG 1 cut(s) 959
Mva1269I GAATGC 2 cut(s) 275, 1225
MvaI CCWGG 2 cut(s) 555, 1175
MwoI GCNNNNNNNGC 4 cut(s) 849, 854, 869, 1105
NdeII GATC 6 cut(s) 346, 368, 697, 808, 931, 1013
NlaIII CATG 6 cut(s) 418, 480, 492, 914, 1243, 1329
NlaIV GGNNCC 1 cut(s) 1125
NmuCI GTSAC 4 cut(s) 47, 71, 1140, 1256
NsiI ATGCAT 1 cut(s) 330
NspI RCATGY 1 cut(s) 1329
NspV TTCGAA 2 cut(s) 8, 782
PaeR7I CTCGAG 1 cut(s) 392
PciI ACATGT 1 cut(s) 1325
PcsI WCGNNNNNNNCGW 1 cut(s) 390
PctI GAATGC 2 cut(s) 275, 1225
PfeI GAWTC 6 cut(s) 42, 59, 310, 651, 1028, 1170
PkrI GCNGC 2 cut(s) 560, 907
PleI GAGTC 2 cut(s) 27, 149
PpsI GAGTC 2 cut(s) 27, 149
PscI ACATGT 1 cut(s) 1325
PshAI GACNNNNGTC 1 cut(s) 387
PsiI TTATAA 1 cut(s) 693
Psp124BI GAGCTC 1 cut(s) 721
Psp6I CCWGG 2 cut(s) 553, 1173
PspGI CCWGG 2 cut(s) 553, 1173
PspN4I GGNNCC 1 cut(s) 1125
PspPI GGNCC 1 cut(s) 147
PstI CTGCAG 1 cut(s) 447
PstNI CAGNNNCTG 1 cut(s) 830
RsaI GTAC 3 cut(s) 101, 225, 1273
RsaNI GTAC 3 cut(s) 100, 224, 1272
RseI CAYNNNNRTG 1 cut(s) 300
SacI GAGCTC 1 cut(s) 721
SaqAI TTAA 4 cut(s) 639, 647, 1214, 1301
SatI GCNGC 2 cut(s) 559, 906
Sau3AI GATC 6 cut(s) 346, 368, 697, 808, 931, 1013
Sau96I GGNCC 1 cut(s) 147
ScaI AGTACT 1 cut(s) 101
SchI GAGTC 2 cut(s) 28, 150
ScrFI CCNGG 2 cut(s) 555, 1175
SduI GDGCHC 1 cut(s) 721
SfaNI GCATC 1 cut(s) 1117
SfcI CTRYAG 2 cut(s) 443, 666
Sfr274I CTCGAG 1 cut(s) 392
SfuI TTCGAA 2 cut(s) 8, 782
SlaI CTCGAG 1 cut(s) 392
SmiMI CAYNNNNRTG 1 cut(s) 300
SmlI CTYRAG 4 cut(s) 392, 494, 638, 743
SmoI CTYRAG 4 cut(s) 392, 494, 638, 743
SsiI CCGC 2 cut(s) 753, 1073
SspI AATATT 1 cut(s) 1208
SspMI CTAG 3 cut(s) 164, 266, 1025
SstI GAGCTC 1 cut(s) 721
StyD4I CCNGG 2 cut(s) 553, 1173
TaaI ACNGT 3 cut(s) 514, 595, 667
TaiI ACGT 2 cut(s) 1053, 1149
TaqI TCGA 4 cut(s) 8, 393, 729, 782
TatI WGTACW 3 cut(s) 99, 223, 1271
TfiI GAWTC 6 cut(s) 42, 59, 310, 651, 1028, 1170
Tru1I TTAA 4 cut(s) 639, 647, 1214, 1301
Tru9I TTAA 4 cut(s) 639, 647, 1214, 1301
TscAI CASTG 4 cut(s) 52, 322, 432, 670
TseFI GTSAC 4 cut(s) 47, 71, 1140, 1256
TseI GCWGC 2 cut(s) 558, 905
Tsp45I GTSAC 4 cut(s) 47, 71, 1140, 1256
TspDTI ATGAA 7 cut(s) 224, 284, 403, 465, 496, 965, 1256
TspGWI ACGGA 1 cut(s) 192
TspRI CASTG 4 cut(s) 52, 322, 432, 670
Vha464I CTTAAG 1 cut(s) 638
XapI RAATTY 5 cut(s) 10, 613, 778, 876, 1245
XbaI TCTAGA 2 cut(s) 163, 1024
XceI RCATGY 1 cut(s) 1329
XhoI CTCGAG 1 cut(s) 392
XspI CTAG 3 cut(s) 164, 266, 1025
ZraI GACGTC 1 cut(s) 1051
ZrmI AGTACT 1 cut(s) 101
Zsp2I ATGCAT 1 cut(s) 330
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.