AT1G60400

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000062
Physical Location & Seq
Forward (+)
22254405 .. 22255798
1394 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G60400.1

Sequence Viewer

Length: 1212 bp
ATGGTTAGAACCTCTATCAAAAGCATAGGCTCGGGGATAGATAGGTTAAGCGCTTTACCAGAGCATTTGTTGTGTCGTATACTCTCTGAACTCTCCACCAAGGATTCGGTTCGCACGAGTGTTTTGTCTAAGCATTGGAGAAATCTTTGGTTACATGTTCCTGTTTTGGAATTGGAAACCAGTGATTTTCCAGATAATCTGGTCTTTAGGGAGTTCATTGATAGATTTGTCGGATTTGACAAAGAGATAGACTTAAAGAGTTTCGATATATTTTATGATGTTAATGTCCTCTGGTATGATGATTTTCTGTGGATGATCGATGATGTGGTTAAGCGTAGAGTTTGTGATCTAATGGTTACCAATAACCCGTATGTTGTTAATGAAAAGTTAGTTAAAATGCCTATATCCCTTTATTCATGTGCAACATTGGTGAATTTAAACCTCTCTTTTGTTGCCATGAATAATCTACCGTCAGAATCGGTTTGTTTACCTCGTGTCAAGACCTTATATTTACATGGGGTTAAACTTGATGGCGATTCCATTCTGGGGACTCTCGTATCAAGTTGTTCGGTTCTCGAAGATTTAACCGTGGTTACGCATCCTGGTGACTATGAGAAGGTCGTATGTTTTCGCTCTCAATCAGTAAAAAGCTTCACAATAGAGTCTCAGTGTGAGTATAAAGACCCCAATGTTGAGATTGATTGTCCTAGGCTTGAGTATATGTGTATTAGGGAATACCAATCTGAAAGCTTTGTAGTACACAGTATTGGTCCCTATGCAAAGGTAGACGTCGATATTTTCTTTGAAGTTGAGTATGAAGATCCACTGGCGATATCTATGATCAGAAATTTTCTCACCGGGATATCCAAAGTCCGTGAAATGACCATCTCAAGTCGAACGTTAGAGGTCATCCGTGGCTATCACTCCATGGTGAAAGCATTACCTCAATTTTCCAACTTGTCTAGCTTGGATGCTTTGTTAGTCGAATCATATTGGGAACTCTTACCAGTCTTTCTTGGTTGTTGCATCAATCTAAATTCACTCGTCGTGGAACTTGATGGCCTTTCCGAGATAGAGGAGTTTAAAGTTTCACCACTGCTTCAAGATTCCCTATCTGCTCGTGGGTTTGTTCAGCAGAAGACACCAGTTTCAGTCACAAAGACATCAAGTGAAAGGAAAATAGCAGCATATTTTGTGAAGAAAAGTGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

403

Amino Acids

45.86

Weight (kDa)

5.13

Isoelectric Point (pI)

42.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 16 - 55 1.3e-08 F-box domain
LRR_At5g56370 PF24758 108 - 245 8.8e-13 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 792
AccI GTMKAC 2 cut(s) 79, 786
AclI AACGTT 1 cut(s) 899
AclWI GGATC 1 cut(s) 815
AcsI RAATTY 3 cut(s) 433, 847, 1036
AcyI GRCGYC 1 cut(s) 789
AfaI GTAC 1 cut(s) 759
AfeI AGCGCT 1 cut(s) 52
AfiI CCNNNNNNNGG 1 cut(s) 546
AflIII ACRYGT 1 cut(s) 154
AgsI TTSAA 2 cut(s) 806, 1103
AjnI CCWGG 1 cut(s) 601
AluBI AGCT 3 cut(s) 651, 750, 966
AluI AGCT 3 cut(s) 651, 750, 966
Alw26I GTCTC 1 cut(s) 669
AlwI GGATC 1 cut(s) 815
Ama87I CYCGRG 1 cut(s) 31
Aor51HI AGCGCT 1 cut(s) 52
AoxI GGCC 1 cut(s) 1060
ApeKI GCWGC 1 cut(s) 1184
ApoI RAATTY 3 cut(s) 433, 847, 1036
AspA2I CCTAGG 1 cut(s) 707
AspLEI GCGC 1 cut(s) 53
AspS9I GGNCC 1 cut(s) 770
AsuC2I CCSGG 1 cut(s) 859
AsuHPI GGTGA 5 cut(s) 442, 617, 847, 943, 1083
AvaI CYCGRG 1 cut(s) 31
AvaII GGWCC 1 cut(s) 770
AvrII CCTAGG 1 cut(s) 707
BaeI ACNNNNGTAYC 2 cut(s) 540, 573
BauI CACGAG 3 cut(s) 115, 492, 1119
BbsI GAAGAC 1 cut(s) 1145
BbvI GCAGC 1 cut(s) 1196
BccI CCATC 3 cut(s) 524, 893, 1052
BciT130I CCWGG 1 cut(s) 603
BclI TGATCA 1 cut(s) 840
BcnI CCSGG 1 cut(s) 859
BcoDI GTCTC 1 cut(s) 669
BfaI CTAG 2 cut(s) 708, 963
BfoI RGCGCY 1 cut(s) 54
BisI GCNGC 1 cut(s) 1185
BlnI CCTAGG 1 cut(s) 707
BlsI GCNGC 1 cut(s) 1186
Bme1390I CCNGG 2 cut(s) 603, 859
Bme18I GGWCC 1 cut(s) 770
BmeT110I CYCGRG 1 cut(s) 31
BmgT120I GGNCC 1 cut(s) 770
BmiI GGNNCC 1 cut(s) 772
BmrFI CCNGG 2 cut(s) 603, 859
BmsI GCATC 3 cut(s) 607, 961, 1035
BpiI GAAGAC 1 cut(s) 1145
BpuEI CTTGAG 2 cut(s) 734, 874
BpuMI CCSGG 1 cut(s) 859
Bsa29I ATCGAT 1 cut(s) 318
BsaHI GRCGYC 1 cut(s) 789
BsaJI CCNNGG 5 cut(s) 99, 588, 707, 913, 927
Bsc4I CCNNNNNNNGG 1 cut(s) 546
Bse1I ACTGG 4 cut(s) 180, 831, 1007, 1145
BseBI CCWGG 1 cut(s) 603
BseCI ATCGAT 1 cut(s) 318
BseDI CCNNGG 5 cut(s) 99, 588, 707, 913, 927
BseGI GGATG 4 cut(s) 318, 598, 909, 976
BseLI CCNNNNNNNGG 1 cut(s) 546
BseMII CTCAG 1 cut(s) 680
BseNI ACTGG 4 cut(s) 180, 831, 1007, 1145
BseRI GAGGAG 1 cut(s) 1091
BseXI GCAGC 1 cut(s) 1196
BshFI GGCC 1 cut(s) 1062
BshVI ATCGAT 1 cut(s) 318
BsiHKCI CYCGRG 1 cut(s) 31
BsiSI CCGG 1 cut(s) 858
BslFI GGGAC 2 cut(s) 562, 756
BslI CCNNNNNNNGG 1 cut(s) 546
BsmAI GTCTC 1 cut(s) 669
BsmFI GGGAC 2 cut(s) 562, 756
BsnI GGCC 1 cut(s) 1062
BsoBI CYCGRG 1 cut(s) 31
Bsp143I GATC 4 cut(s) 315, 346, 820, 840
Bsp19I CCATGG 1 cut(s) 927
BspANI GGCC 1 cut(s) 1062
BspCNI CTCAG 1 cut(s) 679
BspDI ATCGAT 1 cut(s) 318
BspLI GGNNCC 1 cut(s) 772
BspPI GGATC 1 cut(s) 815
BsrI ACTGG 4 cut(s) 180, 831, 1007, 1145
BssECI CCNNGG 5 cut(s) 99, 588, 707, 913, 927
BssMI GATC 4 cut(s) 315, 346, 820, 840
BssNAI GTATAC 1 cut(s) 80
BssNI GRCGYC 1 cut(s) 789
BssSI CACGAG 3 cut(s) 115, 492, 1119
BssT1I CCWWGG 3 cut(s) 99, 707, 927
Bst1107I GTATAC 1 cut(s) 80
Bst2BI CACGAG 3 cut(s) 115, 492, 1119
Bst2UI CCWGG 1 cut(s) 603
Bst4CI ACNGT 3 cut(s) 471, 589, 764
BstACI GRCGYC 1 cut(s) 789
BstDEI CTNAG 2 cut(s) 129, 666
BstDSI CCRYGG 3 cut(s) 588, 913, 927
BstEII GGTNACC 1 cut(s) 355
BstF5I GGATG 4 cut(s) 318, 598, 909, 976
BstH2I RGCGCY 1 cut(s) 54
BstHHI GCGC 1 cut(s) 53
BstKTI GATC 4 cut(s) 318, 349, 823, 843
BstMAI GTCTC 1 cut(s) 669
BstMBI GATC 4 cut(s) 315, 346, 820, 840
BstNI CCWGG 1 cut(s) 603
BstNSI RCATGY 1 cut(s) 158
BstPI GGTNACC 1 cut(s) 355
BstSCI CCNGG 2 cut(s) 601, 857
BstV1I GCAGC 1 cut(s) 1196
BstV2I GAAGAC 1 cut(s) 1145
BstX2I RGATCY 1 cut(s) 820
BstYI RGATCY 1 cut(s) 820
BstZ17I GTATAC 1 cut(s) 80
Bsu15I ATCGAT 1 cut(s) 318
BsuRI GGCC 1 cut(s) 1062
BsuTUI ATCGAT 1 cut(s) 318
BtgI CCRYGG 3 cut(s) 588, 913, 927
BtsCI GGATG 4 cut(s) 318, 598, 909, 976
BtsI GCAGTG 1 cut(s) 1094
BtsIMutI CAGTG 4 cut(s) 187, 674, 824, 1094
CfoI GCGC 1 cut(s) 53
Cfr13I GGNCC 1 cut(s) 770
ClaI ATCGAT 1 cut(s) 318
Csp6I GTAC 1 cut(s) 758
CviAII CATG 5 cut(s) 155, 417, 457, 515, 928
CviJI RGCY 8 cut(s) 30, 651, 712, 750, 918, 966, 1062, 1209
CviKI_1 RGCY 8 cut(s) 30, 651, 712, 750, 918, 966, 1062, 1209
CviQI GTAC 1 cut(s) 758
DdeI CTNAG 2 cut(s) 129, 666
DpnI GATC 4 cut(s) 317, 348, 822, 842
DpnII GATC 4 cut(s) 315, 346, 820, 840
DraI TTTAAA 2 cut(s) 438, 1084
Eco130I CCWWGG 3 cut(s) 99, 707, 927
Eco32I GATATC 2 cut(s) 834, 864
Eco47I GGWCC 1 cut(s) 770
Eco47III AGCGCT 1 cut(s) 52
Eco88I CYCGRG 1 cut(s) 31
Eco91I GGTNACC 1 cut(s) 355
EcoO65I GGTNACC 1 cut(s) 355
EcoRII CCWGG 1 cut(s) 601
EcoRV GATATC 2 cut(s) 834, 864
EcoT14I CCWWGG 3 cut(s) 99, 707, 927
ErhI CCWWGG 3 cut(s) 99, 707, 927
FaeI CATG 5 cut(s) 158, 420, 460, 518, 931
FaqI GGGAC 2 cut(s) 562, 756
FatI CATG 5 cut(s) 154, 416, 456, 514, 927
FbaI TGATCA 1 cut(s) 840
FblI GTMKAC 2 cut(s) 79, 786
Fnu4HI GCNGC 1 cut(s) 1185
FokI GGATG 4 cut(s) 325, 585, 896, 983
Fsp4HI GCNGC 1 cut(s) 1185
FspBI CTAG 2 cut(s) 708, 963
GlaI GCGC 1 cut(s) 52
GluI GCNGC 1 cut(s) 1185
HaeII RGCGCY 1 cut(s) 54
HaeIII GGCC 1 cut(s) 1062
HapII CCGG 1 cut(s) 858
HhaI GCGC 1 cut(s) 53
Hin1I GRCGYC 1 cut(s) 789
Hin1II CATG 5 cut(s) 158, 420, 460, 518, 931
Hin6I GCGC 1 cut(s) 51
HinP1I GCGC 1 cut(s) 51
HindIII AAGCTT 2 cut(s) 649, 748
HinfI GANTC 7 cut(s) 104, 476, 536, 550, 662, 986, 1106
HpaII CCGG 1 cut(s) 858
HphI GGTGA 5 cut(s) 442, 617, 847, 943, 1083
Hpy166II GTNNAC 4 cut(s) 80, 488, 760, 787
Hpy188I TCNGA 6 cut(s) 88, 233, 475, 745, 845, 1069
Hpy188III TCNNGA 4 cut(s) 191, 499, 575, 1103
Hpy8I GTNNAC 4 cut(s) 80, 488, 760, 787
Hpy99I CGWCG 2 cut(s) 794, 1049
HpyAV CCTTC 1 cut(s) 610
HpyCH4III ACNGT 3 cut(s) 471, 589, 764
HpyCH4IV ACGT 2 cut(s) 789, 899
HpyCH4V TGCA 3 cut(s) 422, 779, 1026
HpyF3I CTNAG 2 cut(s) 129, 666
HpySE526I ACGT 2 cut(s) 789, 899
Hsp92I GRCGYC 1 cut(s) 789
Hsp92II CATG 5 cut(s) 158, 420, 460, 518, 931
HspAI GCGC 1 cut(s) 51
Ksp22I TGATCA 1 cut(s) 840
Kzo9I GATC 4 cut(s) 315, 346, 820, 840
Lsp1109I GCAGC 1 cut(s) 1196
LweI GCATC 3 cut(s) 607, 961, 1035
MaeI CTAG 2 cut(s) 708, 963
MaeII ACGT 2 cut(s) 789, 899
MaeIII GTNAC 5 cut(s) 150, 355, 592, 605, 1153
MalI GATC 4 cut(s) 317, 348, 822, 842
MboI GATC 4 cut(s) 315, 346, 820, 840
MboII GAAGA 4 cut(s) 590, 830, 1150, 1210
MflI RGATCY 1 cut(s) 820
MluCI AATT 5 cut(s) 170, 433, 847, 947, 1036
MlyI GAGTC 2 cut(s) 544, 671
MmeI TCCRAC 2 cut(s) 211, 978
MnlI CCTC 7 cut(s) 22, 299, 452, 501, 898, 954, 1069
MslI CAYNNNNRTG 1 cut(s) 603
MspI CCGG 1 cut(s) 858
MspR9I CCNGG 2 cut(s) 603, 859
MvaI CCWGG 1 cut(s) 603
NciI CCSGG 1 cut(s) 859
NcoI CCATGG 1 cut(s) 927
NdeII GATC 4 cut(s) 315, 346, 820, 840
NlaIII CATG 5 cut(s) 158, 420, 460, 518, 931
NlaIV GGNNCC 1 cut(s) 772
NmuCI GTSAC 2 cut(s) 605, 1153
NspI RCATGY 1 cut(s) 158
PciI ACATGT 1 cut(s) 154
PcsI WCGNNNNNNNCGW 1 cut(s) 113
PfeI GAWTC 5 cut(s) 104, 476, 536, 986, 1106
PkrI GCNGC 1 cut(s) 1186
PleI GAGTC 2 cut(s) 544, 670
PpsI GAGTC 2 cut(s) 544, 670
PscI ACATGT 1 cut(s) 154
Psp1406I AACGTT 1 cut(s) 899
Psp6I CCWGG 1 cut(s) 601
PspEI GGTNACC 1 cut(s) 355
PspGI CCWGG 1 cut(s) 601
PspN4I GGNNCC 1 cut(s) 772
PspPI GGNCC 1 cut(s) 770
PsuI RGATCY 1 cut(s) 820
RsaI GTAC 1 cut(s) 759
RsaNI GTAC 1 cut(s) 758
RseI CAYNNNNRTG 1 cut(s) 603
SatI GCNGC 1 cut(s) 1185
Sau3AI GATC 4 cut(s) 315, 346, 820, 840
Sau96I GGNCC 1 cut(s) 770
SchI GAGTC 2 cut(s) 544, 671
ScrFI CCNGG 2 cut(s) 603, 859
SfaNI GCATC 3 cut(s) 607, 961, 1035
SinI GGWCC 1 cut(s) 770
SmiMI CAYNNNNRTG 1 cut(s) 603
SmlI CTYRAG 2 cut(s) 713, 889
SmoI CTYRAG 2 cut(s) 713, 889
Sse9I AATT 5 cut(s) 170, 433, 847, 947, 1036
SspMI CTAG 2 cut(s) 708, 963
StyD4I CCNGG 2 cut(s) 601, 857
StyI CCWWGG 3 cut(s) 99, 707, 927
TaaI ACNGT 3 cut(s) 471, 589, 764
TaiI ACGT 2 cut(s) 792, 902
TaqI TCGA 6 cut(s) 264, 318, 576, 792, 895, 984
TasI AATT 5 cut(s) 170, 433, 847, 947, 1036
TatI WGTACW 1 cut(s) 757
TfiI GAWTC 5 cut(s) 104, 476, 536, 986, 1106
TscAI CASTG 4 cut(s) 187, 674, 831, 1101
TseFI GTSAC 2 cut(s) 605, 1153
TseI GCWGC 1 cut(s) 1184
Tsp45I GTSAC 2 cut(s) 605, 1153
TspDTI ATGAA 5 cut(s) 205, 396, 405, 473, 831
TspGWI ACGGA 2 cut(s) 863, 902
TspRI CASTG 4 cut(s) 187, 674, 831, 1101
VpaK11BI GGWCC 1 cut(s) 770
XapI RAATTY 3 cut(s) 433, 847, 1036
XceI RCATGY 1 cut(s) 158
XmaJI CCTAGG 1 cut(s) 707
XmiI GTMKAC 2 cut(s) 79, 786
XspI CTAG 2 cut(s) 708, 963
ZraI GACGTC 1 cut(s) 790
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.