Rh4DG208800

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0000062
Physical Location & Seq
Forward (+)
40292992 .. 40294071
1080 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG208800.1

Sequence Viewer

Length: 1080 bp
ATGAGGCATAAAATAGTTGAACTTGATCTTCATATATTTGATCAGAATGGTCCTAGAAGGTTGGGAGACCTTCAATTGCCTGTGAGCCTTTTCACATGCAAAACTCTTGTGGCTTTGAAGGTGTGTTCGAATTGTATGAACCTTGCTCCTCCTCCTTCGGCATCAACATGTTTTCCAAGTCTCAAGTCCCTCCGCTATACACTTAGTTGGCCTGATAGTGCCTCAATGTTCGAAATGCTCGCTTCCAAGTGTCCTGTACTTGAAGACTTGACCATCGATACATTTACATTTGGAAATCCCTATACTCTAAATATCCCTGCAGCAGGATTGAAAACGTTTAGAATTCTAGGTGTCTTAATGGATGCGGATAAGTACAGTTTTTCTATCAATGCCCCAAAGCTTGAAAACCTTGTCGTCTCAGGTCAAGTTGGTTTATCAAATTACTACTTTTCGAACAATGCAAAAGCCATGGTCAAAGCTGAGATCCATTTAATCCATGGTGATAGCGGAGGGAATATTTATCATGTTGAAAGGGCACCTCCTTTGCTAGAAGGAGTCTCTGGTGTTAAATATTTGTCTCTTTTAACTCCTGTGTTTTCGGCACGTTCTCTGCCTTCCTTCGATAATTTGAAGCATTTGAAGGTTGGCCTGTTTCGTTGCTCTTATTGGGGATATGTAATCGAGCTGCTCAAGAGATCACCAAATCTGGAAGATATTGTTTTGGATATTTGGACTTGGACATGGGGTAAACAAGAATATGTGAAAGGGTACCGGCCCTTCAATCCACCAGAGGTTGTTCCTATTTGTGTTTCCTCGCACCTCAGGACCATTTCTATCATTAATTTCATGGGATATGATGATGAGTTTGAAGTGGTCAAATATTTGTTGCAGTATAGTGAAGTTCTTAGGAGGTTAACTATTTCAACCCGTGAGAGTTATCTTTTTACTACTCGAAGAATGACAGCAGAGAAGTTGCATAAGAAAGCTTTGAAGTTTCAAAAATGCTCCAAGACTTGTGAGATTGAAATAATTATCAACTCCGAGACTGACCGGCACAAAAACTGTAGTTGTCATTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

359

Amino Acids

40.78

Weight (kDa)

8.75

Isoelectric Point (pI)

44.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 4 - 323 6.8e-10 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 7 - 144 7.4e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 263 - 307 2.6e-10 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 768
AccB1I GGYRCC 2 cut(s) 535, 768
AciI CCGC 3 cut(s) 193, 365, 507
AclI AACGTT 1 cut(s) 335
AclWI GGATC 1 cut(s) 478
AcsI RAATTY 1 cut(s) 342
AfaI GTAC 3 cut(s) 258, 374, 770
AfiI CCNNNNNNNGG 1 cut(s) 323
AflIII ACRYGT 1 cut(s) 167
AluBI AGCT 4 cut(s) 400, 479, 685, 986
AluI AGCT 4 cut(s) 400, 479, 685, 986
Alw26I GTCTC 6 cut(s) 60, 185, 421, 562, 582, 1037
AlwI GGATC 1 cut(s) 478
AoxI GGCC 3 cut(s) 209, 646, 773
ApeKI GCWGC 2 cut(s) 320, 685
ApoI RAATTY 1 cut(s) 342
AseI ATTAAT 1 cut(s) 840
Asp718I GGTACC 1 cut(s) 768
AspS9I GGNCC 3 cut(s) 50, 774, 825
AsuHPI GGTGA 2 cut(s) 512, 690
AsuII TTCGAA 3 cut(s) 128, 231, 452
AvaII GGWCC 2 cut(s) 50, 825
AxyI CCTNAGG 1 cut(s) 821
BaeGI GKGCMC 1 cut(s) 538
BanI GGYRCC 2 cut(s) 535, 768
BarI GAAGNNNNNNTAC 2 cut(s) 761, 793
BbsI GAAGAC 1 cut(s) 270
BbvI GCAGC 2 cut(s) 332, 672
BccI CCATC 1 cut(s) 281
BclI TGATCA 1 cut(s) 40
BcoDI GTCTC 6 cut(s) 60, 185, 421, 562, 582, 1037
BfaI CTAG 3 cut(s) 54, 347, 548
BfmI CTRYAG 2 cut(s) 318, 1063
BisI GCNGC 2 cut(s) 321, 686
BlsI GCNGC 2 cut(s) 322, 687
Bme18I GGWCC 2 cut(s) 50, 825
BmgT120I GGNCC 3 cut(s) 50, 774, 825
BmiI GGNNCC 2 cut(s) 537, 770
BmsI GCATC 2 cut(s) 170, 352
BpiI GAAGAC 1 cut(s) 270
Bpu14I TTCGAA 3 cut(s) 128, 231, 452
BpuEI CTTGAG 2 cut(s) 167, 674
Bsa29I ATCGAT 1 cut(s) 276
BsaI GGTCTC 1 cut(s) 60
BsaJI CCNNGG 2 cut(s) 468, 496
Bsc4I CCNNNNNNNGG 1 cut(s) 323
Bse118I RCCGGY 2 cut(s) 771, 1050
Bse21I CCTNAGG 1 cut(s) 821
BseCI ATCGAT 1 cut(s) 276
BseDI CCNNGG 2 cut(s) 468, 496
BseGI GGATG 1 cut(s) 367
BseLI CCNNNNNNNGG 1 cut(s) 323
BseMII CTCAG 3 cut(s) 432, 471, 835
BseRI GAGGAG 2 cut(s) 138, 141
BseSI GKGCMC 1 cut(s) 538
BseXI GCAGC 2 cut(s) 332, 672
BshFI GGCC 3 cut(s) 211, 648, 775
BshNI GGYRCC 2 cut(s) 535, 768
BshVI ATCGAT 1 cut(s) 276
BsiSI CCGG 2 cut(s) 772, 1051
BslFI GGGAC 1 cut(s) 172
BslI CCNNNNNNNGG 1 cut(s) 323
BsmAI GTCTC 6 cut(s) 60, 185, 421, 562, 582, 1037
BsmBI CGTCTC 1 cut(s) 421
BsmFI GGGAC 1 cut(s) 172
BsnI GGCC 3 cut(s) 211, 648, 775
Bso31I GGTCTC 1 cut(s) 60
Bsp119I TTCGAA 3 cut(s) 128, 231, 452
Bsp1286I GDGCHC 1 cut(s) 538
Bsp143I GATC 4 cut(s) 25, 40, 483, 695
Bsp19I CCATGG 2 cut(s) 468, 496
BspACI CCGC 3 cut(s) 193, 365, 507
BspANI GGCC 3 cut(s) 211, 648, 775
BspCNI CTCAG 3 cut(s) 431, 472, 834
BspDI ATCGAT 1 cut(s) 276
BspLI GGNNCC 2 cut(s) 537, 770
BspMAI CTGCAG 1 cut(s) 322
BspPI GGATC 1 cut(s) 478
BspT104I TTCGAA 3 cut(s) 128, 231, 452
BspT107I GGYRCC 2 cut(s) 535, 768
BspTNI GGTCTC 1 cut(s) 60
BsrFI RCCGGY 2 cut(s) 771, 1050
BssAI RCCGGY 2 cut(s) 771, 1050
BssECI CCNNGG 2 cut(s) 468, 496
BssMI GATC 4 cut(s) 25, 40, 483, 695
BssT1I CCWWGG 2 cut(s) 468, 496
Bst4CI ACNGT 2 cut(s) 377, 1064
BstBI TTCGAA 3 cut(s) 128, 231, 452
BstC8I GCNNGC 1 cut(s) 240
BstDEI CTNAG 5 cut(s) 203, 418, 480, 821, 905
BstDSI CCRYGG 2 cut(s) 468, 496
BstENI CCTNNNNNAGG 1 cut(s) 321
BstF5I GGATG 1 cut(s) 367
BstKTI GATC 4 cut(s) 28, 43, 486, 698
BstMAI GTCTC 6 cut(s) 60, 185, 421, 562, 582, 1037
BstMBI GATC 4 cut(s) 25, 40, 483, 695
BstNSI RCATGY 2 cut(s) 99, 171
BstSFI CTRYAG 2 cut(s) 318, 1063
BstSLI GKGCMC 1 cut(s) 538
BstV1I GCAGC 2 cut(s) 332, 672
BstV2I GAAGAC 1 cut(s) 270
BstX2I RGATCY 1 cut(s) 483
BstYI RGATCY 1 cut(s) 483
Bsu15I ATCGAT 1 cut(s) 276
Bsu36I CCTNAGG 1 cut(s) 821
BsuRI GGCC 3 cut(s) 211, 648, 775
BsuTUI ATCGAT 1 cut(s) 276
BtgI CCRYGG 2 cut(s) 468, 496
BtsCI GGATG 1 cut(s) 367
Cac8I GCNNGC 1 cut(s) 240
Cfr10I RCCGGY 2 cut(s) 771, 1050
Cfr13I GGNCC 3 cut(s) 50, 774, 825
ClaI ATCGAT 1 cut(s) 276
Csp6I GTAC 3 cut(s) 257, 373, 769
CviAII CATG 7 cut(s) 96, 168, 469, 497, 524, 741, 847
CviQI GTAC 3 cut(s) 257, 373, 769
DdeI CTNAG 5 cut(s) 203, 418, 480, 821, 905
DpnI GATC 4 cut(s) 27, 42, 485, 697
DpnII GATC 4 cut(s) 25, 40, 483, 695
Eco130I CCWWGG 2 cut(s) 468, 496
Eco31I GGTCTC 1 cut(s) 60
Eco47I GGWCC 2 cut(s) 50, 825
Eco81I CCTNAGG 1 cut(s) 821
EcoNI CCTNNNNNAGG 1 cut(s) 321
EcoRI GAATTC 1 cut(s) 342
EcoT14I CCWWGG 2 cut(s) 468, 496
ErhI CCWWGG 2 cut(s) 468, 496
Esp3I CGTCTC 1 cut(s) 421
FaeI CATG 7 cut(s) 99, 171, 472, 500, 527, 744, 850
FaqI GGGAC 1 cut(s) 172
FatI CATG 7 cut(s) 95, 167, 468, 496, 523, 740, 846
FbaI TGATCA 1 cut(s) 40
Fnu4HI GCNGC 2 cut(s) 321, 686
FokI GGATG 1 cut(s) 374
Fsp4HI GCNGC 2 cut(s) 321, 686
FspBI CTAG 3 cut(s) 54, 347, 548
GluI GCNGC 2 cut(s) 321, 686
HaeIII GGCC 3 cut(s) 211, 648, 775
HapII CCGG 2 cut(s) 772, 1051
Hin1II CATG 7 cut(s) 99, 171, 472, 500, 527, 744, 850
HincII GTYRAC 1 cut(s) 915
HindII GTYRAC 1 cut(s) 915
HindIII AAGCTT 2 cut(s) 398, 984
HinfI GANTC 1 cut(s) 555
HpaI GTTAAC 1 cut(s) 915
HpaII CCGG 2 cut(s) 772, 1051
HphI GGTGA 2 cut(s) 512, 690
Hpy166II GTNNAC 2 cut(s) 749, 915
Hpy188I TCNGA 2 cut(s) 45, 1042
Hpy188III TCNNGA 3 cut(s) 691, 707, 823
Hpy8I GTNNAC 2 cut(s) 749, 915
HpyAV CCTTC 9 cut(s) 51, 80, 112, 165, 545, 624, 628, 634, 787
HpyCH4III ACNGT 2 cut(s) 377, 1064
HpyCH4IV ACGT 2 cut(s) 335, 604
HpyCH4V TGCA 5 cut(s) 99, 320, 461, 889, 976
HpyF3I CTNAG 5 cut(s) 203, 418, 480, 821, 905
HpySE526I ACGT 2 cut(s) 335, 604
Hsp92II CATG 7 cut(s) 99, 171, 472, 500, 527, 744, 850
KpnI GGTACC 1 cut(s) 772
Ksp22I TGATCA 1 cut(s) 40
KspAI GTTAAC 1 cut(s) 915
Kzo9I GATC 4 cut(s) 25, 40, 483, 695
LmnI GCTCC 2 cut(s) 151, 1010
Lsp1109I GCAGC 2 cut(s) 332, 672
LweI GCATC 2 cut(s) 170, 352
MaeI CTAG 3 cut(s) 54, 347, 548
MaeII ACGT 2 cut(s) 335, 604
MalI GATC 4 cut(s) 27, 42, 485, 697
MboI GATC 4 cut(s) 25, 40, 483, 695
MboII GAAGA 4 cut(s) 20, 275, 722, 966
MfeI CAATTG 1 cut(s) 74
MflI RGATCY 1 cut(s) 483
MhlI GDGCHC 1 cut(s) 538
MluCI AATT 7 cut(s) 74, 130, 342, 439, 625, 841, 1029
MlyI GAGTC 1 cut(s) 564
MseI TTAA 6 cut(s) 356, 491, 567, 584, 840, 914
MslI CAYNNNNRTG 1 cut(s) 166
MspI CCGG 2 cut(s) 772, 1051
MunI CAATTG 1 cut(s) 74
NcoI CCATGG 2 cut(s) 468, 496
NdeII GATC 4 cut(s) 25, 40, 483, 695
NlaIII CATG 7 cut(s) 99, 171, 472, 500, 527, 744, 850
NlaIV GGNNCC 2 cut(s) 537, 770
NspI RCATGY 2 cut(s) 99, 171
NspV TTCGAA 3 cut(s) 128, 231, 452
PciI ACATGT 1 cut(s) 167
PkrI GCNGC 2 cut(s) 322, 687
PleI GAGTC 1 cut(s) 563
PpsI GAGTC 1 cut(s) 563
PscI ACATGT 1 cut(s) 167
PshBI ATTAAT 1 cut(s) 840
Psp1406I AACGTT 1 cut(s) 335
PspN4I GGNNCC 2 cut(s) 537, 770
PspPI GGNCC 3 cut(s) 50, 774, 825
PstI CTGCAG 1 cut(s) 322
PsuI RGATCY 1 cut(s) 483
RsaI GTAC 3 cut(s) 258, 374, 770
RsaNI GTAC 3 cut(s) 257, 373, 769
RseI CAYNNNNRTG 1 cut(s) 166
SaqAI TTAA 6 cut(s) 356, 491, 567, 584, 840, 914
SatI GCNGC 2 cut(s) 321, 686
Sau3AI GATC 4 cut(s) 25, 40, 483, 695
Sau96I GGNCC 3 cut(s) 50, 774, 825
SchI GAGTC 1 cut(s) 564
SduI GDGCHC 1 cut(s) 538
SfaNI GCATC 2 cut(s) 170, 352
SfcI CTRYAG 2 cut(s) 318, 1063
SfuI TTCGAA 3 cut(s) 128, 231, 452
SinI GGWCC 2 cut(s) 50, 825
SmiMI CAYNNNNRTG 1 cut(s) 166
SmlI CTYRAG 2 cut(s) 182, 689
SmoI CTYRAG 2 cut(s) 182, 689
Sse9I AATT 7 cut(s) 74, 130, 342, 439, 625, 841, 1029
SsiI CCGC 3 cut(s) 193, 365, 507
SspI AATATT 3 cut(s) 517, 572, 881
SspMI CTAG 3 cut(s) 54, 347, 548
StyI CCWWGG 2 cut(s) 468, 496
TaaI ACNGT 2 cut(s) 377, 1064
TaiI ACGT 2 cut(s) 338, 607
TaqI TCGA 7 cut(s) 128, 231, 276, 452, 621, 681, 952
TasI AATT 7 cut(s) 74, 130, 342, 439, 625, 841, 1029
TatI WGTACW 2 cut(s) 256, 372
Tru1I TTAA 6 cut(s) 356, 491, 567, 584, 840, 914
Tru9I TTAA 6 cut(s) 356, 491, 567, 584, 840, 914
TseI GCWGC 2 cut(s) 320, 685
TspDTI ATGAA 3 cut(s) 20, 152, 835
VpaK11BI GGWCC 2 cut(s) 50, 825
VspI ATTAAT 1 cut(s) 840
XagI CCTNNNNNAGG 1 cut(s) 321
XapI RAATTY 1 cut(s) 342
XceI RCATGY 2 cut(s) 99, 171
XcmI CCANNNNNNNNNTGG 1 cut(s) 494
XspI CTAG 3 cut(s) 54, 347, 548
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.