Rw5G018220

F-box LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000062
Physical Location & Seq
Forward (+)
23572501 .. 23577852
5352 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G018220.1

Sequence Viewer

Length: 1230 bp
ATGGCTATGTGTTTACACCTGCCTCAGACGGTTATGGAGGTGTCGCCAATGGAGGAAAATCCTCGACCTGGAAAACGTGGAACAGCGCATGCATTGAAAAGACAAATAGCGCAACTTCAAACTCCGACTCACTCTCAGGGCTTCACTACATTTTCCGGGTCCGTCTCGGAATCTCTTCTAGGTAGTACCAATGGATTCTCAATCAAAGGTATATGGGCCTTTAGTCCCAATCTGGACTTCCGCGATAGATTTACGAAGAACAAAGCTGGTTTTGTGGATTTTGTTGAGAGGGTACTTATCTTCCGTGACTTGGATATTCAAAAGTTTCGTCTCGAATGTTCCAATGTTGGGGATTTCTCTCGTATCTATAGCTGGATTCGTACTGCAGTTAGGCATAACGTTGTTGAAGTTGATCTTAATTTTGGATCCAAAAGAGACCAGGTTTATGAGTTGCCAGACAGCCTTTTTATGTGTAAATCACTGGAGGTGTTGAAGGTGGTATCGGGATATTTGTTCAATGCGTATAAAGATGAAAATGAATATCACAGCGAAGATGAAGATGAAGCTCCTGAATGCATTGATGTCTACAACTTCTTCATTAATGCCCCAAAGCTTGAAACCATTGATATCCATACCGATATCTTGTCAAATTTTTTCTTTGAAAATGCAGCATCACTAATGAAAGCCAATATTAATCTCACTGACCATGATTCAAGTGAACGGCGTACCTTTGCTAATTGTGCAACTGCACTTCTGGCAGCAGTTTCCAATGTTAAGGATTTGTCTCTTTCAGCTCATTGTTTCAAGGCTTGTTATCTCCCCGCTTTTGGTAACTTAAGCAAATTGAAGCTGGTTTTTCAAGATTGCCATCACCTGGAATTGCTGTTACCAGAGTTTCTCACCAGATCACCTAAACTGGAATCTCTCATCATAGATCATTTTGAGTATGCTTGTGGAGAACATACCAACAACCGTCGTTGGAGTCAACCAAAGAAGGTGCCTAATTGTTTGCTAGGAGCTCCTGATGAAATGAAAATGGCAAAGTATTTATTGATGACCGGTAAAGTTCTGGAAACAGTGACTGTTTCAACTACAACTGACAGGGATCTTCTTTCTGTATATGCAACAGAGGAGGAATTACAGAAGACATTCTGTACCTTTCAAAAGGGTTCAAAGACTTGTGTGGTTAAATTCTTCAAAGACAAAGTTCGTAGGTCCCTAGACTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

409

Amino Acids

46.63

Weight (kDa)

6.2

Isoelectric Point (pI)

41.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 27
Acc36I ACCTGC 1 cut(s) 27
AccB1I GGYRCC 1 cut(s) 997
AccB7I CCANNNNNTGG 1 cut(s) 874
AccI GTMKAC 1 cut(s) 585
AccII CGCG 1 cut(s) 243
AciI CCGC 2 cut(s) 241, 822
AclI AACGTT 1 cut(s) 399
AclWI GGATC 3 cut(s) 420, 433, 1113
AcsI RAATTY 2 cut(s) 649, 1190
AfaI GTAC 5 cut(s) 187, 294, 382, 727, 1156
AfiI CCNNNNNNNGG 5 cut(s) 68, 310, 348, 827, 874
AflII CTTAAG 1 cut(s) 835
AgeI ACCGGT 1 cut(s) 1058
AjnI CCWGG 3 cut(s) 67, 438, 873
AjuI GAANNNNNNNTTGG 2 cut(s) 221, 253
AluBI AGCT 7 cut(s) 266, 372, 566, 613, 794, 850, 1019
AluI AGCT 7 cut(s) 266, 372, 566, 613, 794, 850, 1019
Alw21I GWGCWC 1 cut(s) 1021
Alw26I GTCTC 4 cut(s) 169, 335, 429, 789
AlwI GGATC 3 cut(s) 420, 433, 1113
AlwNI CAGNNNCTG 1 cut(s) 1082
AoxI GGCC 1 cut(s) 216
ApeKI GCWGC 2 cut(s) 668, 758
ApoI RAATTY 2 cut(s) 649, 1190
ArsI GACNNNNNNTTYG 2 cut(s) 313, 345
AseI ATTAAT 2 cut(s) 600, 693
AsiGI ACCGGT 1 cut(s) 1058
Asp700I GAANNNNTTC 2 cut(s) 174, 1148
AspLEI GCGC 2 cut(s) 88, 112
AspS9I GGNCC 3 cut(s) 159, 216, 1215
AsuC2I CCSGG 1 cut(s) 157
AsuHPI GGTGA 3 cut(s) 863, 892, 900
AvaII GGWCC 2 cut(s) 159, 1215
BamHI GGATCC 1 cut(s) 425
BanI GGYRCC 1 cut(s) 997
BanII GRGCYC 1 cut(s) 1021
BbsI GAAGAC 1 cut(s) 1151
Bbv12I GWGCWC 1 cut(s) 1021
BbvI GCAGC 2 cut(s) 680, 770
BccI CCATC 1 cut(s) 876
BceAI ACGGC 1 cut(s) 737
BciT130I CCWGG 3 cut(s) 69, 440, 875
BcnI CCSGG 1 cut(s) 157
BcoDI GTCTC 4 cut(s) 169, 335, 429, 789
BfaI CTAG 3 cut(s) 179, 1013, 1220
BfmI CTRYAG 2 cut(s) 367, 384
BfrI CTTAAG 1 cut(s) 835
BfuAI ACCTGC 1 cut(s) 27
BisI GCNGC 2 cut(s) 669, 759
BlsI GCNGC 2 cut(s) 670, 760
Bme1390I CCNGG 4 cut(s) 69, 157, 440, 875
Bme18I GGWCC 2 cut(s) 159, 1215
BmgT120I GGNCC 3 cut(s) 159, 216, 1215
BmiI GGNNCC 4 cut(s) 160, 427, 999, 1217
BmrFI CCNGG 4 cut(s) 69, 157, 440, 875
BmsI GCATC 1 cut(s) 680
BpiI GAAGAC 1 cut(s) 1151
BpmI CTGGAG 1 cut(s) 503
BpuMI CCSGG 1 cut(s) 157
BsaBI GATNNNNATC 1 cut(s) 867
BsaI GGTCTC 1 cut(s) 429
BsaWI WCCGGW 1 cut(s) 1058
Bsc4I CCNNNNNNNGG 5 cut(s) 68, 310, 348, 827, 874
Bse118I RCCGGY 1 cut(s) 1058
Bse1I ACTGG 2 cut(s) 486, 921
Bse8I GATNNNNATC 1 cut(s) 867
BseBI CCWGG 3 cut(s) 69, 440, 875
BseJI GATNNNNATC 1 cut(s) 867
BseLI CCNNNNNNNGG 5 cut(s) 68, 310, 348, 827, 874
BseMII CTCAG 2 cut(s) 38, 149
BseNI ACTGG 2 cut(s) 486, 921
BseRI GAGGAG 1 cut(s) 1145
BseXI GCAGC 2 cut(s) 680, 770
BsgI GTGCAG 1 cut(s) 732
Bsh1236I CGCG 1 cut(s) 243
BshFI GGCC 1 cut(s) 218
BshNI GGYRCC 1 cut(s) 997
BshTI ACCGGT 1 cut(s) 1058
BsiHKAI GWGCWC 1 cut(s) 1021
BsiSI CCGG 2 cut(s) 156, 1059
BslFI GGGAC 2 cut(s) 210, 1201
BslI CCNNNNNNNGG 5 cut(s) 68, 310, 348, 827, 874
BsmAI GTCTC 4 cut(s) 169, 335, 429, 789
BsmBI CGTCTC 2 cut(s) 169, 335
BsmFI GGGAC 2 cut(s) 210, 1201
BsmI GAATGC 1 cut(s) 578
BsnI GGCC 1 cut(s) 218
Bso31I GGTCTC 1 cut(s) 429
Bsp1286I GDGCHC 1 cut(s) 1021
Bsp143I GATC 5 cut(s) 412, 425, 905, 934, 1105
BspACI CCGC 2 cut(s) 241, 822
BspANI GGCC 1 cut(s) 218
BspCNI CTCAG 2 cut(s) 37, 148
BspFNI CGCG 1 cut(s) 243
BspLI GGNNCC 4 cut(s) 160, 427, 999, 1217
BspMAI CTGCAG 1 cut(s) 388
BspMI ACCTGC 1 cut(s) 27
BspPI GGATC 3 cut(s) 420, 433, 1113
BspT107I GGYRCC 1 cut(s) 997
BspTI CTTAAG 1 cut(s) 835
BspTNI GGTCTC 1 cut(s) 429
BsrFI RCCGGY 1 cut(s) 1058
BsrI ACTGG 2 cut(s) 486, 921
BssAI RCCGGY 1 cut(s) 1058
BssMI GATC 5 cut(s) 412, 425, 905, 934, 1105
Bst2UI CCWGG 3 cut(s) 69, 440, 875
Bst4CI ACNGT 4 cut(s) 31, 974, 1078, 1084
Bst6I CTCTTC 1 cut(s) 180
BstAFI CTTAAG 1 cut(s) 835
BstC8I GCNNGC 1 cut(s) 90
BstDEI CTNAG 2 cut(s) 24, 135
BstFNI CGCG 1 cut(s) 243
BstHHI GCGC 2 cut(s) 88, 112
BstKTI GATC 5 cut(s) 415, 428, 908, 937, 1108
BstMAI GTCTC 4 cut(s) 169, 335, 429, 789
BstMBI GATC 5 cut(s) 412, 425, 905, 934, 1105
BstMWI GCNNNNNNNGC 2 cut(s) 740, 755
BstNI CCWGG 3 cut(s) 69, 440, 875
BstNSI RCATGY 1 cut(s) 92
BstSCI CCNGG 4 cut(s) 67, 155, 438, 873
BstSFI CTRYAG 2 cut(s) 367, 384
BstUI CGCG 1 cut(s) 243
BstV1I GCAGC 2 cut(s) 680, 770
BstV2I GAAGAC 1 cut(s) 1151
BstX2I RGATCY 2 cut(s) 425, 1105
BstYI RGATCY 2 cut(s) 425, 1105
BsuRI GGCC 1 cut(s) 218
BtsIMutI CAGTG 3 cut(s) 479, 699, 1083
BveI ACCTGC 1 cut(s) 27
Cac8I GCNNGC 1 cut(s) 90
CaiI CAGNNNCTG 1 cut(s) 1082
CfoI GCGC 2 cut(s) 88, 112
Cfr10I RCCGGY 1 cut(s) 1058
Cfr13I GGNCC 3 cut(s) 159, 216, 1215
CsiI ACCWGGT 1 cut(s) 438
Csp6I GTAC 5 cut(s) 186, 293, 381, 726, 1155
CspAI ACCGGT 1 cut(s) 1058
CviAII CATG 2 cut(s) 89, 707
CviQI GTAC 5 cut(s) 186, 293, 381, 726, 1155
DdeI CTNAG 2 cut(s) 24, 135
DpnI GATC 5 cut(s) 414, 427, 907, 936, 1107
DpnII GATC 5 cut(s) 412, 425, 905, 934, 1105
Eam1104I CTCTTC 1 cut(s) 180
EarI CTCTTC 1 cut(s) 180
Ecl136II GAGCTC 1 cut(s) 1019
Eco24I GRGCYC 1 cut(s) 1021
Eco31I GGTCTC 1 cut(s) 429
Eco32I GATATC 2 cut(s) 628, 640
Eco47I GGWCC 2 cut(s) 159, 1215
Eco53kI GAGCTC 1 cut(s) 1019
EcoICRI GAGCTC 1 cut(s) 1019
EcoO109I RGGNCCY 1 cut(s) 1215
EcoRII CCWGG 3 cut(s) 67, 438, 873
EcoRV GATATC 2 cut(s) 628, 640
EcoT22I ATGCAT 2 cut(s) 94, 578
EcoT38I GRGCYC 1 cut(s) 1021
Esp3I CGTCTC 2 cut(s) 169, 335
FaeI CATG 2 cut(s) 92, 710
FalI AAGNNNNNCTT 2 cut(s) 399, 431
FaqI GGGAC 2 cut(s) 210, 1201
FatI CATG 2 cut(s) 88, 706
FauI CCCGC 1 cut(s) 829
FblI GTMKAC 1 cut(s) 585
Fnu4HI GCNGC 2 cut(s) 669, 759
FriOI GRGCYC 1 cut(s) 1021
Fsp4HI GCNGC 2 cut(s) 669, 759
FspBI CTAG 3 cut(s) 179, 1013, 1220
GlaI GCGC 2 cut(s) 87, 111
GluI GCNGC 2 cut(s) 669, 759
GsuI CTGGAG 1 cut(s) 503
HaeIII GGCC 1 cut(s) 218
HapII CCGG 2 cut(s) 156, 1059
HhaI GCGC 2 cut(s) 88, 112
Hin1II CATG 2 cut(s) 92, 710
Hin6I GCGC 2 cut(s) 86, 110
HinP1I GCGC 2 cut(s) 86, 110
HincII GTYRAC 1 cut(s) 986
HindII GTYRAC 1 cut(s) 986
HindIII AAGCTT 1 cut(s) 611
HinfI GANTC 7 cut(s) 127, 170, 195, 376, 710, 920, 982
HpaII CCGG 2 cut(s) 156, 1059
HphI GGTGA 3 cut(s) 863, 892, 900
Hpy166II GTNNAC 4 cut(s) 14, 586, 719, 986
Hpy188I TCNGA 3 cut(s) 27, 126, 169
Hpy188III TCNNGA 7 cut(s) 233, 332, 504, 569, 860, 1022, 1070
Hpy8I GTNNAC 4 cut(s) 14, 586, 719, 986
Hpy99I CGWCG 1 cut(s) 978
HpyAV CCTTC 2 cut(s) 487, 988
HpyCH4III ACNGT 4 cut(s) 31, 974, 1078, 1084
HpyCH4IV ACGT 2 cut(s) 76, 399
HpyCH4V TGCA 7 cut(s) 92, 386, 576, 668, 743, 749, 1124
HpyF10VI GCNNNNNNNGC 2 cut(s) 740, 755
HpyF3I CTNAG 2 cut(s) 24, 135
HpySE526I ACGT 2 cut(s) 76, 399
Hsp92II CATG 2 cut(s) 92, 710
HspAI GCGC 2 cut(s) 86, 110
Kzo9I GATC 5 cut(s) 412, 425, 905, 934, 1105
LmnI GCTCC 3 cut(s) 571, 1016, 1024
Lsp1109I GCAGC 2 cut(s) 680, 770
LweI GCATC 1 cut(s) 680
MabI ACCWGGT 1 cut(s) 438
MaeI CTAG 3 cut(s) 179, 1013, 1220
MaeII ACGT 2 cut(s) 76, 399
MaeIII GTNAC 4 cut(s) 305, 830, 885, 1078
MalI GATC 5 cut(s) 414, 427, 907, 936, 1107
MboI GATC 5 cut(s) 412, 425, 905, 934, 1105
MboII GAAGA 9 cut(s) 167, 268, 292, 563, 569, 586, 1100, 1156, 1186
MflI RGATCY 2 cut(s) 425, 1105
MhlI GDGCHC 1 cut(s) 1021
MluCI AATT 8 cut(s) 418, 649, 736, 842, 878, 1003, 1136, 1190
MlyI GAGTC 2 cut(s) 121, 991
MmeI TCCRAC 2 cut(s) 149, 959
MnlI CCTC 8 cut(s) 31, 33, 46, 72, 282, 478, 1123, 1126
Mph1103I ATGCAT 2 cut(s) 94, 578
MroXI GAANNNNTTC 2 cut(s) 174, 1148
MseI TTAA 7 cut(s) 417, 600, 693, 774, 836, 1188, 1228
MspCI CTTAAG 1 cut(s) 835
MspI CCGG 2 cut(s) 156, 1059
MspR9I CCNGG 4 cut(s) 69, 157, 440, 875
Mva1269I GAATGC 1 cut(s) 578
MvaI CCWGG 3 cut(s) 69, 440, 875
MvnI CGCG 1 cut(s) 243
MwoI GCNNNNNNNGC 2 cut(s) 740, 755
NciI CCSGG 1 cut(s) 157
NdeII GATC 5 cut(s) 412, 425, 905, 934, 1105
NlaIII CATG 2 cut(s) 92, 710
NlaIV GGNNCC 4 cut(s) 160, 427, 999, 1217
NmuCI GTSAC 2 cut(s) 305, 1078
NsiI ATGCAT 2 cut(s) 94, 578
NspI RCATGY 1 cut(s) 92
PaeI GCATGC 1 cut(s) 92
PaqCI CACCTGC 1 cut(s) 27
PctI GAATGC 1 cut(s) 578
PdmI GAANNNNTTC 2 cut(s) 174, 1148
PfeI GAWTC 5 cut(s) 170, 195, 376, 710, 920
PflMI CCANNNNNTGG 1 cut(s) 874
PinAI ACCGGT 1 cut(s) 1058
PkrI GCNGC 2 cut(s) 670, 760
PleI GAGTC 2 cut(s) 121, 990
PpsI GAGTC 2 cut(s) 121, 990
PpuMI RGGWCCY 1 cut(s) 1215
PshBI ATTAAT 2 cut(s) 600, 693
Psp124BI GAGCTC 1 cut(s) 1021
Psp1406I AACGTT 1 cut(s) 399
Psp5II RGGWCCY 1 cut(s) 1215
Psp6I CCWGG 3 cut(s) 67, 438, 873
PspGI CCWGG 3 cut(s) 67, 438, 873
PspN4I GGNNCC 4 cut(s) 160, 427, 999, 1217
PspPI GGNCC 3 cut(s) 159, 216, 1215
PspPPI RGGWCCY 1 cut(s) 1215
PstI CTGCAG 1 cut(s) 388
PstNI CAGNNNCTG 1 cut(s) 1082
PsuI RGATCY 2 cut(s) 425, 1105
RsaI GTAC 5 cut(s) 187, 294, 382, 727, 1156
RsaNI GTAC 5 cut(s) 186, 293, 381, 726, 1155
SacI GAGCTC 1 cut(s) 1021
SaqAI TTAA 7 cut(s) 417, 600, 693, 774, 836, 1188, 1228
SatI GCNGC 2 cut(s) 669, 759
Sau3AI GATC 5 cut(s) 412, 425, 905, 934, 1105
Sau96I GGNCC 3 cut(s) 159, 216, 1215
SchI GAGTC 2 cut(s) 121, 991
ScrFI CCNGG 4 cut(s) 69, 157, 440, 875
SduI GDGCHC 1 cut(s) 1021
SexAI ACCWGGT 1 cut(s) 438
SfaNI GCATC 1 cut(s) 680
SfcI CTRYAG 2 cut(s) 367, 384
SinI GGWCC 2 cut(s) 159, 1215
SmlI CTYRAG 1 cut(s) 835
SmoI CTYRAG 1 cut(s) 835
SphI GCATGC 1 cut(s) 92
Sse9I AATT 8 cut(s) 418, 649, 736, 842, 878, 1003, 1136, 1190
SsiI CCGC 2 cut(s) 241, 822
SspI AATATT 1 cut(s) 691
SspMI CTAG 3 cut(s) 179, 1013, 1220
SstI GAGCTC 1 cut(s) 1021
StyD4I CCNGG 4 cut(s) 67, 155, 438, 873
TaaI ACNGT 4 cut(s) 31, 974, 1078, 1084
TaiI ACGT 2 cut(s) 79, 402
TaqI TCGA 2 cut(s) 64, 333
TasI AATT 8 cut(s) 418, 649, 736, 842, 878, 1003, 1136, 1190
TfiI GAWTC 5 cut(s) 170, 195, 376, 710, 920
Tru1I TTAA 7 cut(s) 417, 600, 693, 774, 836, 1188, 1228
Tru9I TTAA 7 cut(s) 417, 600, 693, 774, 836, 1188, 1228
TscAI CASTG 3 cut(s) 486, 706, 1083
TseFI GTSAC 2 cut(s) 305, 1078
TseI GCWGC 2 cut(s) 668, 758
Tsp45I GTSAC 2 cut(s) 305, 1078
TspDTI ATGAA 8 cut(s) 546, 552, 570, 576, 586, 695, 1041, 1046
TspGWI ACGGA 2 cut(s) 151, 293
TspRI CASTG 3 cut(s) 486, 706, 1083
Van91I CCANNNNNTGG 1 cut(s) 874
Vha464I CTTAAG 1 cut(s) 835
VpaK11BI GGWCC 2 cut(s) 159, 1215
VspI ATTAAT 2 cut(s) 600, 693
XapI RAATTY 2 cut(s) 649, 1190
XceI RCATGY 1 cut(s) 92
XmiI GTMKAC 1 cut(s) 585
XmnI GAANNNNTTC 2 cut(s) 174, 1148
XspI CTAG 3 cut(s) 179, 1013, 1220
Zsp2I ATGCAT 2 cut(s) 94, 578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.