AT4G13985

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0000062
Physical Location & Seq
Reverse (-)
8080118 .. 8081669
1552 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G13985.1

Sequence Viewer

Length: 1380 bp
ATGGAAGAAGACAGGGAGAGCCGCGTTAGTGCGAAGCCATCAGGTGATAGAGTAGATCGGCTGAGAAACTTACCAGATTGCTTGCTTTTTAAGATTCTCTTGAATCTTCCCACCAAGGATGTGGTTAAGTTAAGTGTACTATCACGCCGCTGGAGAAATGTCTGGAGATATGTACCTGGTTTGGACTTGGAATGTGGTGATTTCATGGTGAGGGAGTATTATGATTCATCGGAATTCAACGCTTTGTTGGGTTTCGTTTATAGGTTTCTAGGTTTTAATAGCGAGTCGTGTTTACAAAAGTTTAAGTTAACGGTTAATTGGTATGACGATGTTCAGCTTGAAACTGTTCATTTCACCGAGTGGTTTAACGCTGTTGTTAAGCGGAAAGTTCAACATCTCCATATCCTGGACAAAACTTGGGGGAGAGATGAAGTGGTGATACCCCCAACAGTTTTTACGTGTGGGAGCTTGATATCCTTAAATCTCTATGACGTATACTTGCCTAATCGCGAGTTTGTGTCTTTACCTTCCCTCAAAGTTATCGTTCTAGATGCAGTTGTGTTTGACGAAGATTTCGCTTTCGAAATGCTGGTCTCAGGCTGCCCAGTTCTCGAAAGCTTAAGTGTAAACAAGATTAACTTGAACGACATTTCAGAAAGTGTTCAAGTGTCTTCGCAGTCTCTATTGAGCTTCAGTTATGTTGCAGACGATGATGATTATCTAGAAGTTGTAATTGATGCTCCTAGGCTTCACTATCTAAAGCTCAATGATAAACGAACTGCAAGTTTTATAATGAAAAATCATGGCTCCCTTCTTAAGGCGGATATTGATTTTGTGTTTAACTTAGGTTCCGAATATATGTTCGATCCAAATTATCTACCAACGAGACATATAATTCGTGACTTTCTTGTCGGTTTATCTGGTGTTAAAGATATGATCATCTCTTCGAGTACTCTTCAGGTCATATATGATTACTCAAGATGTGAACAACTACCCTTATTCCGTAATGTATCTTTCTTGCGTGTTGAATTCGCCGACTACAGGTGGGAAATGTTGCCAATCTTTCTTGAGAGCTGCCCGAATCTAAAATCTCTTGTCTTGGGATTTAGTATACCTCCAGGGAAGGAGGGAGCTAATATTTTACCTGGACCCCGGCGGTTTCTAACATCTCTCGAGTATGTTAAGATTGCAAAGCCGATGGCAGCGGAGGCAAGCGAGATAAAACTGAAACTAGTGAGTTACTTTCTAGAGAACTCAACAATCCTCAAGAAACTCACACTATGCTTACGTAACTTCAGAGAGAAGGAAGAATCTGTCATCGTCAAGAAACTCCTTACCATTCCAAGACTCTCTCCTTCATGCCAAGTTTTCGTTCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

459

Amino Acids

52.88

Weight (kDa)

5.84

Isoelectric Point (pI)

43.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 22 - 58 2e-09 F-box domain
LRR_At5g56370 PF24758 119 - 257 4.3e-16 FBD-associated F-box protein At5g56370, LRR repeats
LRR_2 PF07723 177 - 202 3.3e-06 Leucine Rich Repeat
FBD PF08387 384 - 427 3.9e-09 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 791
AasI GACNNNNNNGTC 1 cut(s) 908
AccB7I CCANNNNNTGG 1 cut(s) 406
AccI GTMKAC 2 cut(s) 495, 1111
AccII CGCG 2 cut(s) 24, 510
AciI CCGC 6 cut(s) 22, 148, 382, 821, 1156, 1205
AclWI GGATC 1 cut(s) 860
AcsI RAATTY 2 cut(s) 233, 1028
AcuI CTGAAG 3 cut(s) 676, 941, 1279
AdeI CACNNNGTG 1 cut(s) 360
AfaI GTAC 3 cut(s) 138, 174, 952
AfiI CCNNNNNNNGG 3 cut(s) 406, 817, 1041
AflII CTTAAG 2 cut(s) 619, 815
AflIII ACRYGT 1 cut(s) 458
AgsI TTSAA 7 cut(s) 103, 238, 341, 392, 643, 665, 1028
AhlI ACTAGT 1 cut(s) 1231
AjnI CCWGG 4 cut(s) 175, 405, 1117, 1144
AjuI GAANNNNNNNTTGG 1 cut(s) 1356
AluBI AGCT 7 cut(s) 337, 468, 618, 690, 763, 1074, 1133
AluI AGCT 7 cut(s) 337, 468, 618, 690, 763, 1074, 1133
Alw26I GTCTC 3 cut(s) 598, 684, 880
AlwI GGATC 1 cut(s) 860
Ama87I CYCGRG 1 cut(s) 1172
ApeKI GCWGC 3 cut(s) 600, 1074, 1202
ApoI RAATTY 2 cut(s) 233, 1028
ArsI GACNNNNNNTTYG 6 cut(s) 557, 576, 589, 608, 879, 911
Asp700I GAANNNNTTC 2 cut(s) 345, 660
AspA2I CCTAGG 1 cut(s) 743
AspS9I GGNCC 1 cut(s) 1148
AsuC2I CCSGG 1 cut(s) 1153
AsuHPI GGTGA 5 cut(s) 56, 209, 220, 346, 448
AsuII TTCGAA 1 cut(s) 582
AvaI CYCGRG 1 cut(s) 1172
AvaII GGWCC 1 cut(s) 1148
AvrII CCTAGG 1 cut(s) 743
BarI GAAGNNNNNNTAC 2 cut(s) 423, 455
BbsI GAAGAC 2 cut(s) 15, 663
BbvI GCAGC 3 cut(s) 587, 1061, 1214
BccI CCATC 2 cut(s) 46, 1192
BciT130I CCWGG 4 cut(s) 177, 407, 1119, 1146
BclI TGATCA 1 cut(s) 936
BcnI CCSGG 1 cut(s) 1153
BcoDI GTCTC 3 cut(s) 598, 684, 880
BcuI ACTAGT 1 cut(s) 1231
BfaI CTAG 6 cut(s) 269, 548, 722, 744, 1232, 1247
BfmI CTRYAG 1 cut(s) 1039
BfrI CTTAAG 2 cut(s) 619, 815
BisI GCNGC 5 cut(s) 22, 148, 601, 1075, 1203
BlnI CCTAGG 1 cut(s) 743
BlsI GCNGC 5 cut(s) 23, 149, 602, 1076, 1204
BmcAI AGTACT 1 cut(s) 952
Bme1390I CCNGG 5 cut(s) 177, 407, 1119, 1146, 1153
Bme18I GGWCC 1 cut(s) 1148
BmeT110I CYCGRG 1 cut(s) 1172
BmgT120I GGNCC 1 cut(s) 1148
BmiI GGNNCC 3 cut(s) 808, 850, 1150
BmrFI CCNGG 5 cut(s) 177, 407, 1119, 1146, 1153
BmrI ACTGGG 1 cut(s) 599
BmsI GCATC 2 cut(s) 541, 727
BmuI ACTGGG 1 cut(s) 599
BpiI GAAGAC 2 cut(s) 15, 663
BpmI CTGGAG 3 cut(s) 172, 184, 1101
Bpu14I TTCGAA 1 cut(s) 582
BpuEI CTTGAG 3 cut(s) 961, 1088, 1250
BpuMI CCSGG 1 cut(s) 1153
BsaAI YACGTR 2 cut(s) 459, 1289
BsaBI GATNNNNATC 1 cut(s) 717
BsaI GGTCTC 1 cut(s) 598
BsaJI CCNNGG 4 cut(s) 114, 743, 1118, 1151
Bsc4I CCNNNNNNNGG 3 cut(s) 406, 817, 1041
Bse1I ACTGG 1 cut(s) 605
Bse8I GATNNNNATC 1 cut(s) 717
BseBI CCWGG 4 cut(s) 177, 407, 1119, 1146
BseDI CCNNGG 4 cut(s) 114, 743, 1118, 1151
BseGI GGATG 1 cut(s) 124
BseJI GATNNNNATC 1 cut(s) 717
BseLI CCNNNNNNNGG 3 cut(s) 406, 817, 1041
BseMII CTCAG 2 cut(s) 53, 609
BseNI ACTGG 1 cut(s) 605
BseXI GCAGC 3 cut(s) 587, 1061, 1214
Bsh1236I CGCG 2 cut(s) 24, 510
BsiHKCI CYCGRG 1 cut(s) 1172
BsiSI CCGG 1 cut(s) 1153
BslI CCNNNNNNNGG 3 cut(s) 406, 817, 1041
BsmAI GTCTC 3 cut(s) 598, 684, 880
Bso31I GGTCTC 1 cut(s) 598
BsoBI CYCGRG 1 cut(s) 1172
Bsp119I TTCGAA 1 cut(s) 582
Bsp143I GATC 3 cut(s) 55, 865, 936
Bsp68I TCGCGA 1 cut(s) 510
BspACI CCGC 6 cut(s) 22, 148, 382, 821, 1156, 1205
BspCNI CTCAG 2 cut(s) 54, 608
BspFNI CGCG 2 cut(s) 24, 510
BspLI GGNNCC 3 cut(s) 808, 850, 1150
BspPI GGATC 1 cut(s) 860
BspT104I TTCGAA 1 cut(s) 582
BspTI CTTAAG 2 cut(s) 619, 815
BspTNI GGTCTC 1 cut(s) 598
BsrI ACTGG 1 cut(s) 605
BssECI CCNNGG 4 cut(s) 114, 743, 1118, 1151
BssMI GATC 3 cut(s) 55, 865, 936
BssNAI GTATAC 2 cut(s) 496, 1112
BssT1I CCWWGG 2 cut(s) 114, 743
Bst1107I GTATAC 2 cut(s) 496, 1112
Bst2UI CCWGG 4 cut(s) 177, 407, 1119, 1146
Bst4CI ACNGT 3 cut(s) 313, 346, 451
Bst6I CTCTTC 2 cut(s) 949, 960
BstAFI CTTAAG 2 cut(s) 619, 815
BstBAI YACGTR 2 cut(s) 459, 1289
BstBI TTCGAA 1 cut(s) 582
BstC8I GCNNGC 2 cut(s) 83, 1213
BstDEI CTNAG 3 cut(s) 62, 595, 844
BstENI CCTNNNNNAGG 1 cut(s) 815
BstF5I GGATG 1 cut(s) 124
BstFNI CGCG 2 cut(s) 24, 510
BstKTI GATC 3 cut(s) 58, 868, 939
BstMAI GTCTC 3 cut(s) 598, 684, 880
BstMBI GATC 3 cut(s) 55, 865, 936
BstMWI GCNNNNNNNGC 1 cut(s) 1208
BstNI CCWGG 4 cut(s) 177, 407, 1119, 1146
BstSCI CCNGG 5 cut(s) 175, 405, 1117, 1144, 1151
BstSFI CTRYAG 1 cut(s) 1039
BstSNI TACGTA 1 cut(s) 1289
BstUI CGCG 2 cut(s) 24, 510
BstV1I GCAGC 3 cut(s) 587, 1061, 1214
BstV2I GAAGAC 2 cut(s) 15, 663
BstXI CCANNNNNNTGG 1 cut(s) 121
BstZ17I GTATAC 2 cut(s) 496, 1112
BtsCI GGATG 1 cut(s) 124
BtuMI TCGCGA 1 cut(s) 510
Cac8I GCNNGC 2 cut(s) 83, 1213
Cfr13I GGNCC 1 cut(s) 1148
CsiI ACCWGGT 1 cut(s) 175
Csp6I GTAC 3 cut(s) 137, 173, 951
CviAII CATG 3 cut(s) 205, 803, 1359
CviQI GTAC 3 cut(s) 137, 173, 951
DdeI CTNAG 3 cut(s) 62, 595, 844
DpnI GATC 3 cut(s) 57, 867, 938
DpnII GATC 3 cut(s) 55, 865, 936
DraIII CACNNNGTG 1 cut(s) 360
DrdI GACNNNNNNGTC 1 cut(s) 908
DseDI GACNNNNNNGTC 1 cut(s) 908
Eam1104I CTCTTC 2 cut(s) 949, 960
EarI CTCTTC 2 cut(s) 949, 960
EciI GGCGGA 1 cut(s) 836
Eco105I TACGTA 1 cut(s) 1289
Eco130I CCWWGG 2 cut(s) 114, 743
Eco31I GGTCTC 1 cut(s) 598
Eco32I GATATC 1 cut(s) 474
Eco47I GGWCC 1 cut(s) 1148
Eco57I CTGAAG 3 cut(s) 676, 941, 1279
Eco88I CYCGRG 1 cut(s) 1172
EcoNI CCTNNNNNAGG 1 cut(s) 815
EcoRI GAATTC 2 cut(s) 233, 1028
EcoRII CCWGG 4 cut(s) 175, 405, 1117, 1144
EcoRV GATATC 1 cut(s) 474
EcoT14I CCWWGG 2 cut(s) 114, 743
ErhI CCWWGG 2 cut(s) 114, 743
FaeI CATG 3 cut(s) 208, 806, 1362
FalI AAGNNNNNCTT 4 cut(s) 83, 115, 623, 655
FatI CATG 3 cut(s) 204, 802, 1358
FbaI TGATCA 1 cut(s) 936
FblI GTMKAC 2 cut(s) 495, 1111
Fnu4HI GCNGC 5 cut(s) 22, 148, 601, 1075, 1203
FokI GGATG 1 cut(s) 131
Fsp4HI GCNGC 5 cut(s) 22, 148, 601, 1075, 1203
FspBI CTAG 6 cut(s) 269, 548, 722, 744, 1232, 1247
GluI GCNGC 5 cut(s) 22, 148, 601, 1075, 1203
GsuI CTGGAG 3 cut(s) 172, 184, 1101
HapII CCGG 1 cut(s) 1153
Hin1II CATG 3 cut(s) 208, 806, 1362
HincII GTYRAC 1 cut(s) 309
HindII GTYRAC 1 cut(s) 309
HindIII AAGCTT 1 cut(s) 616
HinfI GANTC 7 cut(s) 94, 103, 224, 284, 1081, 1310, 1347
HpaI GTTAAC 1 cut(s) 309
HpaII CCGG 1 cut(s) 1153
HphI GGTGA 5 cut(s) 56, 209, 220, 346, 448
Hpy166II GTNNAC 7 cut(s) 137, 293, 309, 496, 628, 986, 1112
Hpy188I TCNGA 5 cut(s) 232, 655, 853, 1298, 1379
Hpy8I GTNNAC 7 cut(s) 137, 293, 309, 496, 628, 986, 1112
HpyAV CCTTC 5 cut(s) 537, 821, 1117, 1297, 1365
HpyCH4III ACNGT 3 cut(s) 313, 346, 451
HpyCH4IV ACGT 3 cut(s) 458, 492, 1288
HpyCH4V TGCA 4 cut(s) 554, 704, 782, 1190
HpyF10VI GCNNNNNNNGC 1 cut(s) 1208
HpyF3I CTNAG 3 cut(s) 62, 595, 844
HpySE526I ACGT 3 cut(s) 458, 492, 1288
Hsp92II CATG 3 cut(s) 208, 806, 1362
Ksp22I TGATCA 1 cut(s) 936
KspAI GTTAAC 1 cut(s) 309
Kzo9I GATC 3 cut(s) 55, 865, 936
LmnI GCTCC 4 cut(s) 465, 745, 812, 1130
Lsp1109I GCAGC 3 cut(s) 587, 1061, 1214
LweI GCATC 2 cut(s) 541, 727
MabI ACCWGGT 1 cut(s) 175
MaeI CTAG 6 cut(s) 269, 548, 722, 744, 1232, 1247
MaeII ACGT 3 cut(s) 458, 492, 1288
MaeIII GTNAC 3 cut(s) 899, 1238, 1289
MalI GATC 3 cut(s) 57, 867, 938
MboI GATC 3 cut(s) 55, 865, 936
MboII GAAGA 8 cut(s) 17, 20, 98, 581, 663, 936, 947, 1319
MluCI AATT 6 cut(s) 233, 316, 732, 871, 894, 1028
MlyI GAGTC 2 cut(s) 293, 1341
MnlI CCTC 6 cut(s) 204, 542, 1120, 1125, 1201, 1274
MroXI GAANNNNTTC 2 cut(s) 345, 660
MspA1I CMGCKG 2 cut(s) 150, 1205
MspCI CTTAAG 2 cut(s) 619, 815
MspI CCGG 1 cut(s) 1153
MspR9I CCNGG 5 cut(s) 177, 407, 1119, 1146, 1153
MvaI CCWGG 4 cut(s) 177, 407, 1119, 1146
MvnI CGCG 2 cut(s) 24, 510
MwoI GCNNNNNNNGC 1 cut(s) 1208
NciI CCSGG 1 cut(s) 1153
NdeII GATC 3 cut(s) 55, 865, 936
NlaIII CATG 3 cut(s) 208, 806, 1362
NlaIV GGNNCC 3 cut(s) 808, 850, 1150
NmuCI GTSAC 1 cut(s) 899
NruI TCGCGA 1 cut(s) 510
NspV TTCGAA 1 cut(s) 582
PaeR7I CTCGAG 1 cut(s) 1172
PdmI GAANNNNTTC 2 cut(s) 345, 660
PfeI GAWTC 5 cut(s) 94, 103, 224, 1081, 1310
PflMI CCANNNNNTGG 1 cut(s) 406
PfoI TCCNGGA 1 cut(s) 405
PkrI GCNGC 5 cut(s) 23, 149, 602, 1076, 1204
PleI GAGTC 2 cut(s) 292, 1341
PpsI GAGTC 2 cut(s) 292, 1341
Ppu21I YACGTR 2 cut(s) 459, 1289
PsiI TTATAA 1 cut(s) 791
Psp6I CCWGG 4 cut(s) 175, 405, 1117, 1144
PspGI CCWGG 4 cut(s) 175, 405, 1117, 1144
PspN4I GGNNCC 3 cut(s) 808, 850, 1150
PspPI GGNCC 1 cut(s) 1148
RruI TCGCGA 1 cut(s) 510
RsaI GTAC 3 cut(s) 138, 174, 952
RsaNI GTAC 3 cut(s) 137, 173, 951
SatI GCNGC 5 cut(s) 22, 148, 601, 1075, 1203
Sau3AI GATC 3 cut(s) 55, 865, 936
Sau96I GGNCC 1 cut(s) 1148
ScaI AGTACT 1 cut(s) 952
SchI GAGTC 2 cut(s) 293, 1341
ScrFI CCNGG 5 cut(s) 177, 407, 1119, 1146, 1153
SexAI ACCWGGT 1 cut(s) 175
SfaNI GCATC 2 cut(s) 541, 727
SfcI CTRYAG 1 cut(s) 1039
Sfr274I CTCGAG 1 cut(s) 1172
SfuI TTCGAA 1 cut(s) 582
SinI GGWCC 1 cut(s) 1148
SlaI CTCGAG 1 cut(s) 1172
SmlI CTYRAG 6 cut(s) 619, 815, 976, 1067, 1172, 1265
SmoI CTYRAG 6 cut(s) 619, 815, 976, 1067, 1172, 1265
SnaBI TACGTA 1 cut(s) 1289
SpeI ACTAGT 1 cut(s) 1231
Sse9I AATT 6 cut(s) 233, 316, 732, 871, 894, 1028
SsiI CCGC 6 cut(s) 22, 148, 382, 821, 1156, 1205
SspI AATATT 1 cut(s) 1138
SspMI CTAG 6 cut(s) 269, 548, 722, 744, 1232, 1247
StyD4I CCNGG 5 cut(s) 175, 405, 1117, 1144, 1151
StyI CCWWGG 2 cut(s) 114, 743
TaaI ACNGT 3 cut(s) 313, 346, 451
TaiI ACGT 3 cut(s) 461, 495, 1291
TaqI TCGA 5 cut(s) 582, 612, 864, 947, 1173
TasI AATT 6 cut(s) 233, 316, 732, 871, 894, 1028
TatI WGTACW 2 cut(s) 136, 950
TauI GCSGC 2 cut(s) 24, 150
TfiI GAWTC 5 cut(s) 94, 103, 224, 1081, 1310
TseFI GTSAC 1 cut(s) 899
TseI GCWGC 3 cut(s) 600, 1074, 1202
Tsp45I GTSAC 1 cut(s) 899
TspDTI ATGAA 6 cut(s) 193, 216, 338, 444, 809, 1347
TspGWI ACGGA 1 cut(s) 992
Van91I CCANNNNNTGG 1 cut(s) 406
Vha464I CTTAAG 2 cut(s) 619, 815
VpaK11BI GGWCC 1 cut(s) 1148
XagI CCTNNNNNAGG 1 cut(s) 815
XapI RAATTY 2 cut(s) 233, 1028
XbaI TCTAGA 3 cut(s) 547, 721, 1246
XcmI CCANNNNNNNNNTGG 1 cut(s) 118
XhoI CTCGAG 1 cut(s) 1172
XmaJI CCTAGG 1 cut(s) 743
XmiI GTMKAC 2 cut(s) 495, 1111
XmnI GAANNNNTTC 2 cut(s) 345, 660
XspI CTAG 6 cut(s) 269, 548, 722, 744, 1232, 1247
ZrmI AGTACT 1 cut(s) 952
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.