Prupe.4G158800_v2.0.a1

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000062
Physical Location & Seq
Reverse (-)
9104744 .. 9107679
2936 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G158800.1

Sequence Viewer

Length: 1767 bp
ATGCAAGCATTAAATGAAAGAGACGGTGCATATAAAGCTCGAGTTTTCCTGGAGAAGTTTCACATTTTTCATTTCGTAGTCGCAAGTCGCAACTCGCAACAGAGATGGTCAAAGCGGCGTCGTACCTGTGGTTACAATTTTCTTAGCCTTTCCCGCCGTTTCTCGACAACCGAGCAGTGCTTTTACTATTCGCTCCCACTAGGGCTTTACTCGGCCATCTCAGAACGTTTCAGAGACATAAAGATGGGTTCGAGGGTAAAGGGTCTCTTACTAATGGGTGGGAAGATACCAAATAAGAAGTCAAATCCTCCAGCAAGAGTTGAAGACAAGATCAGTAAATTACCAAATGAAGTACTTTGTCACATCCTTTCGTTCCTTCCAACAAAATATGCTGTGAGGACCAGCATTCTCTCTACAAGATGGAAGAACGTATGGGCTTTTGTTCCCAACCTAGACTTCAAATATGTAGAAGCCAAGTCTTATTTTTTCAACAAAAAGAAAGACAAGTCTACCTCTGCTGGTTTCTTCACGTTTGTTGATCGTGTGATTTGCCTTCGTGGTTCAGCTGATATTAAAAAATTCTGTCTTCATTGTTCCTGTGGTAGTAAGGATTTCGCTGGTATTGATGGTTGGATTCGAACTGCCATCCAGCATAATGTTGTTGAACTTGATCTTTGTTTTGAAACAACAGATAAAGACCTGGCTTTTGAGTTGCCCCAATTCATTTTCATGTGTAAAACACTGGTGGTTTTGAAGTTGAGGTCAAACTGTATTACCAATGCTCCTCCTGCGTCAGGGTGTTTCCCAAGTCTCAAGATTCTCCATGTCAGAGTTGAATATCCTGTTAATGATTCGATGGAAAAGATTTTTTCTTGCTGTCCTGTACTTGAAGATTTGACTATAGATGGACTTTTGACTATAGATGGACTTCTTGGCTCAGATGATGTTTTGAATTTCAAGATATCTGCTCCTGAACTAAAGACGTTAAGATTGATCTTGCCTCATAGAAAATGGGTTGGCGATCATGATCATCAGTACTGTTTTCTTATTAATTGTCCAAAGGTTGAAAACATTGATCTCAAGCAGGATATTTTATCAAAATATTTATTCAAGAATGCAAAATCCCTGGTCAAAGCCAGTCTTAATCTCTTTAGCCATGCTGTGGCGGATCTACAGCCCGACTTTTCTAACCGTGCAAATGCACTTCTGGCTGGAATTTCCAATGTTAAATATCTTTCTCTATCAGCTCATGTTTGGGAAGCTTGTTGTGTCCCTGCTTTTGATAATTTGAACGAATTGAAGCTGGTTCTTCATGATTGCTACAACTGGGATTTGCTAACAGAGTTGCTCAAGAGATCACCTAATCTGGAACATCTATTCTTAGAACATGAAAACGATGAAGAATGTATATGCTCGGACGAAGAATACTCAGAGGATGGATCCTCAAAGGAAGAATACTCGGAGGATGGATGCTCAAATGCTGAAAAATGGAATACCCCAGACTTTGTGCCTATATGTTTGGTGTCACACCTCAAGACTGTCTCCATAAGGGGATTCCAAGGGCACCTGCATGAGAGGGAAGCGGCAAAGTATTTGTTAGAGAATGGTGAAGTTCTGCGTAAGATGACTATTTATACAGGTGATTTTCTGCCTGCAAAAGAGAAGATATACAAGGAATTTTCAATGTTTCAAAGGGGTTCAAGGACTTGCCAGGTAGAATTTATCGAAGAAGCAGGTTCTAGCTTTGACAACGATTATGTTTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

589

Amino Acids

67.38

Weight (kDa)

7.47

Isoelectric Point (pI)

40.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1575
Acc36I ACCTGC 2 cut(s) 1575, 1724
AccB1I GGYRCC 1 cut(s) 1563
AccB7I CCANNNNNTGG 1 cut(s) 1162
AccI GTMKAC 1 cut(s) 509
AciI CCGC 4 cut(s) 115, 154, 1166, 1583
AclI AACGTT 1 cut(s) 226
AclWI GGATC 3 cut(s) 1176, 1434, 1447
AcoI YGGCCR 1 cut(s) 213
AcsI RAATTY 5 cut(s) 578, 952, 1215, 1676, 1718
AcyI GRCGYC 1 cut(s) 118
AfaI GTAC 4 cut(s) 124, 354, 885, 1037
AfiI CCNNNNNNNGG 2 cut(s) 794, 1162
AjnI CCWGG 4 cut(s) 48, 699, 1125, 1710
AjuI GAANNNNNNNTTGG 2 cut(s) 440, 472
AluBI AGCT 6 cut(s) 38, 566, 1247, 1262, 1303, 1743
AluI AGCT 6 cut(s) 38, 566, 1247, 1262, 1303, 1743
Alw26I GTCTC 5 cut(s) 15, 228, 269, 815, 1546
AlwI GGATC 3 cut(s) 1176, 1434, 1447
Ama87I CYCGRG 1 cut(s) 39
AoxI GGCC 1 cut(s) 213
ApoI RAATTY 5 cut(s) 578, 952, 1215, 1676, 1718
ArsI GACNNNNNNTTYG 4 cut(s) 284, 316, 689, 721
AseI ATTAAT 1 cut(s) 1050
AspS9I GGNCC 1 cut(s) 399
AsuHPI GGTGA 3 cut(s) 1350, 1619, 1652
AsuII TTCGAA 1 cut(s) 637
AvaI CYCGRG 1 cut(s) 39
AvaII GGWCC 1 cut(s) 399
BaeGI GKGCMC 1 cut(s) 1566
BamHI GGATCC 1 cut(s) 1439
BanI GGYRCC 1 cut(s) 1563
BbsI GAAGAC 2 cut(s) 330, 578
BceAI ACGGC 1 cut(s) 141
BciT130I CCWGG 4 cut(s) 50, 701, 1127, 1712
BclI TGATCA 1 cut(s) 1027
BcoDI GTCTC 5 cut(s) 15, 228, 269, 815, 1546
BfaI CTAG 3 cut(s) 200, 452, 1740
BfmI CTRYAG 3 cut(s) 900, 918, 1172
BfuAI ACCTGC 2 cut(s) 1575, 1724
BisI GCNGC 2 cut(s) 116, 1584
BlsI GCNGC 2 cut(s) 117, 1585
BmcAI AGTACT 2 cut(s) 354, 1037
Bme1390I CCNGG 4 cut(s) 50, 701, 1127, 1712
Bme18I GGWCC 1 cut(s) 399
BmeT110I CYCGRG 1 cut(s) 39
BmgT120I GGNCC 1 cut(s) 399
BmiI GGNNCC 2 cut(s) 1441, 1565
BmrFI CCNGG 4 cut(s) 50, 701, 1127, 1712
BmrI ACTGGG 1 cut(s) 1336
BmsI GCATC 1 cut(s) 1460
BmuI ACTGGG 1 cut(s) 1336
BpiI GAAGAC 2 cut(s) 330, 578
BpmI CTGGAG 2 cut(s) 71, 294
Bpu14I TTCGAA 1 cut(s) 637
BpuEI CTTGAG 4 cut(s) 797, 1064, 1334, 1517
BsaBI GATNNNNATC 1 cut(s) 1026
BsaHI GRCGYC 1 cut(s) 118
BsaI GGTCTC 1 cut(s) 269
BsaJI CCNNGG 2 cut(s) 1125, 1558
BsaXI ACNNNNNCTCC 2 cut(s) 766, 796
Bsc4I CCNNNNNNNGG 2 cut(s) 794, 1162
Bse1I ACTGG 3 cut(s) 747, 1137, 1331
Bse8I GATNNNNATC 1 cut(s) 1026
BseBI CCWGG 4 cut(s) 50, 701, 1127, 1712
BseDI CCNNGG 2 cut(s) 1125, 1558
BseGI GGATG 5 cut(s) 363, 645, 1441, 1471, 1475
BseJI GATNNNNATC 1 cut(s) 1026
BseLI CCNNNNNNNGG 2 cut(s) 794, 1162
BseMII CTCAG 3 cut(s) 234, 951, 1443
BseNI ACTGG 3 cut(s) 747, 1137, 1331
BseRI GAGGAG 1 cut(s) 774
BseSI GKGCMC 1 cut(s) 1566
BshFI GGCC 1 cut(s) 215
BshNI GGYRCC 1 cut(s) 1563
BsiHKCI CYCGRG 1 cut(s) 39
BslFI GGGAC 1 cut(s) 1256
BslI CCNNNNNNNGG 2 cut(s) 794, 1162
BsmAI GTCTC 5 cut(s) 15, 228, 269, 815, 1546
BsmBI CGTCTC 1 cut(s) 15
BsmFI GGGAC 1 cut(s) 1256
BsmI GAATGC 2 cut(s) 405, 1120
BsnI GGCC 1 cut(s) 215
Bso31I GGTCTC 1 cut(s) 269
BsoBI CYCGRG 1 cut(s) 39
Bsp119I TTCGAA 1 cut(s) 637
Bsp1286I GDGCHC 1 cut(s) 1566
BspACI CCGC 4 cut(s) 115, 154, 1166, 1583
BspANI GGCC 1 cut(s) 215
BspCNI CTCAG 3 cut(s) 233, 950, 1442
BspHI TCATGA 2 cut(s) 1024, 1312
BspLI GGNNCC 2 cut(s) 1441, 1565
BspMI ACCTGC 2 cut(s) 1575, 1724
BspPI GGATC 3 cut(s) 1176, 1434, 1447
BspT104I TTCGAA 1 cut(s) 637
BspT107I GGYRCC 1 cut(s) 1563
BspTNI GGTCTC 1 cut(s) 269
BsrI ACTGG 3 cut(s) 747, 1137, 1331
BssECI CCNNGG 2 cut(s) 1125, 1558
BssNI GRCGYC 1 cut(s) 118
BssT1I CCWWGG 1 cut(s) 1558
Bst2UI CCWGG 4 cut(s) 50, 701, 1127, 1712
Bst4CI ACNGT 5 cut(s) 26, 770, 1040, 1193, 1540
BstACI GRCGYC 1 cut(s) 118
BstBI TTCGAA 1 cut(s) 637
BstC8I GCNNGC 2 cut(s) 6, 1653
BstDEI CTNAG 5 cut(s) 143, 220, 937, 1381, 1429
BstENI CCTNNNNNAGG 1 cut(s) 792
BstF5I GGATG 5 cut(s) 363, 645, 1441, 1471, 1475
BstMAI GTCTC 5 cut(s) 15, 228, 269, 815, 1546
BstMWI GCNNNNNNNGC 4 cut(s) 35, 153, 788, 1208
BstNI CCWGG 4 cut(s) 50, 701, 1127, 1712
BstSCI CCNGG 4 cut(s) 48, 699, 1125, 1710
BstSFI CTRYAG 3 cut(s) 900, 918, 1172
BstSLI GKGCMC 1 cut(s) 1566
BstV2I GAAGAC 2 cut(s) 330, 578
BstX2I RGATCY 2 cut(s) 1168, 1439
BstYI RGATCY 2 cut(s) 1168, 1439
BsuRI GGCC 1 cut(s) 215
BtsCI GGATG 5 cut(s) 363, 645, 1441, 1471, 1475
BtsI GCAGTG 1 cut(s) 182
BtsIMutI CAGTG 2 cut(s) 182, 740
BveI ACCTGC 2 cut(s) 1575, 1724
Cac8I GCNNGC 2 cut(s) 6, 1653
CciI TCATGA 2 cut(s) 1024, 1312
Cfr13I GGNCC 1 cut(s) 399
CseI GACGC 2 cut(s) 107, 780
Csp6I GTAC 4 cut(s) 123, 353, 884, 1036
CviAII CATG 8 cut(s) 730, 824, 1025, 1157, 1250, 1313, 1388, 1571
CviQI GTAC 4 cut(s) 123, 353, 884, 1036
DdeI CTNAG 5 cut(s) 143, 220, 937, 1381, 1429
EaeI YGGCCR 1 cut(s) 213
EciI GGCGGA 1 cut(s) 1181
Eco130I CCWWGG 1 cut(s) 1558
Eco31I GGTCTC 1 cut(s) 269
Eco32I GATATC 1 cut(s) 963
Eco47I GGWCC 1 cut(s) 399
Eco88I CYCGRG 1 cut(s) 39
EcoNI CCTNNNNNAGG 1 cut(s) 792
EcoRII CCWGG 4 cut(s) 48, 699, 1125, 1710
EcoRV GATATC 1 cut(s) 963
EcoT14I CCWWGG 1 cut(s) 1558
ErhI CCWWGG 1 cut(s) 1558
Esp3I CGTCTC 1 cut(s) 15
FaeI CATG 8 cut(s) 733, 827, 1028, 1160, 1253, 1316, 1391, 1574
FalI AAGNNNNNCTT 4 cut(s) 251, 283, 1125, 1157
FaqI GGGAC 1 cut(s) 1256
FatI CATG 8 cut(s) 729, 823, 1024, 1156, 1249, 1312, 1387, 1570
FauI CCCGC 1 cut(s) 161
FbaI TGATCA 1 cut(s) 1027
FblI GTMKAC 1 cut(s) 509
Fnu4HI GCNGC 2 cut(s) 116, 1584
FokI GGATG 5 cut(s) 350, 632, 1448, 1478, 1482
Fsp4HI GCNGC 2 cut(s) 116, 1584
FspBI CTAG 3 cut(s) 200, 452, 1740
GluI GCNGC 2 cut(s) 116, 1584
GsuI CTGGAG 2 cut(s) 71, 294
HaeIII GGCC 1 cut(s) 215
HgaI GACGC 2 cut(s) 107, 780
Hin1I GRCGYC 1 cut(s) 118
Hin1II CATG 8 cut(s) 733, 827, 1028, 1160, 1253, 1316, 1391, 1574
HindIII AAGCTT 1 cut(s) 1260
HinfI GANTC 4 cut(s) 634, 817, 851, 1554
HphI GGTGA 3 cut(s) 1350, 1619, 1652
Hpy166II GTNNAC 2 cut(s) 510, 1762
Hpy188I TCNGA 7 cut(s) 223, 233, 830, 940, 1417, 1432, 1462
Hpy8I GTNNAC 2 cut(s) 510, 1762
Hpy99I CGWCG 1 cut(s) 123
HpyAV CCTTC 2 cut(s) 386, 563
HpyCH4III ACNGT 5 cut(s) 26, 770, 1040, 1193, 1540
HpyCH4IV ACGT 4 cut(s) 226, 429, 530, 983
HpyCH4V TGCA 7 cut(s) 4, 29, 1118, 1196, 1202, 1570, 1655
HpyF10VI GCNNNNNNNGC 4 cut(s) 35, 153, 788, 1208
HpyF3I CTNAG 5 cut(s) 143, 220, 937, 1381, 1429
HpySE526I ACGT 4 cut(s) 226, 429, 530, 983
Hsp92I GRCGYC 1 cut(s) 118
Hsp92II CATG 8 cut(s) 733, 827, 1028, 1160, 1253, 1316, 1391, 1574
Ksp22I TGATCA 1 cut(s) 1027
LmnI GCTCC 3 cut(s) 198, 787, 973
LweI GCATC 1 cut(s) 1460
MaeI CTAG 3 cut(s) 200, 452, 1740
MaeII ACGT 4 cut(s) 226, 429, 530, 983
MaeIII GTNAC 3 cut(s) 131, 359, 1524
MflI RGATCY 2 cut(s) 1168, 1439
MhlI GDGCHC 1 cut(s) 1566
MmeI TCCRAC 2 cut(s) 404, 611
MseI TTAA 7 cut(s) 11, 573, 846, 986, 1050, 1143, 1227
MslI CAYNNNNRTG 3 cut(s) 242, 728, 1569
MspA1I CMGCKG 1 cut(s) 566
MspR9I CCNGG 4 cut(s) 50, 701, 1127, 1712
Mva1269I GAATGC 2 cut(s) 405, 1120
MvaI CCWGG 4 cut(s) 50, 701, 1127, 1712
MwoI GCNNNNNNNGC 4 cut(s) 35, 153, 788, 1208
NlaIII CATG 8 cut(s) 733, 827, 1028, 1160, 1253, 1316, 1391, 1574
NlaIV GGNNCC 2 cut(s) 1441, 1565
NmeAIII GCCGAG 1 cut(s) 191
NmuCI GTSAC 2 cut(s) 359, 1524
NspV TTCGAA 1 cut(s) 637
PaeR7I CTCGAG 1 cut(s) 39
PagI TCATGA 2 cut(s) 1024, 1312
PaqCI CACCTGC 1 cut(s) 1575
PctI GAATGC 2 cut(s) 405, 1120
PfeI GAWTC 4 cut(s) 634, 817, 851, 1554
PflMI CCANNNNNTGG 1 cut(s) 1162
PfoI TCCNGGA 1 cut(s) 48
PkrI GCNGC 2 cut(s) 117, 1585
PshBI ATTAAT 1 cut(s) 1050
Psp1406I AACGTT 1 cut(s) 226
Psp6I CCWGG 4 cut(s) 48, 699, 1125, 1710
PspGI CCWGG 4 cut(s) 48, 699, 1125, 1710
PspN4I GGNNCC 2 cut(s) 1441, 1565
PspPI GGNCC 1 cut(s) 399
PspXI VCTCGAGB 1 cut(s) 39
PsuI RGATCY 2 cut(s) 1168, 1439
PvuII CAGCTG 1 cut(s) 566
RsaI GTAC 4 cut(s) 124, 354, 885, 1037
RsaNI GTAC 4 cut(s) 123, 353, 884, 1036
RseI CAYNNNNRTG 3 cut(s) 242, 728, 1569
SaqAI TTAA 7 cut(s) 11, 573, 846, 986, 1050, 1143, 1227
SatI GCNGC 2 cut(s) 116, 1584
Sau96I GGNCC 1 cut(s) 399
ScaI AGTACT 2 cut(s) 354, 1037
ScrFI CCNGG 4 cut(s) 50, 701, 1127, 1712
SduI GDGCHC 1 cut(s) 1566
SfaNI GCATC 1 cut(s) 1460
SfcI CTRYAG 3 cut(s) 900, 918, 1172
Sfr274I CTCGAG 1 cut(s) 39
SfuI TTCGAA 1 cut(s) 637
SinI GGWCC 1 cut(s) 399
SlaI CTCGAG 1 cut(s) 39
SmiMI CAYNNNNRTG 3 cut(s) 242, 728, 1569
SmlI CTYRAG 5 cut(s) 39, 812, 1079, 1349, 1532
SmoI CTYRAG 5 cut(s) 39, 812, 1079, 1349, 1532
SsiI CCGC 4 cut(s) 115, 154, 1166, 1583
SspI AATATT 1 cut(s) 1103
SspMI CTAG 3 cut(s) 200, 452, 1740
StyD4I CCNGG 4 cut(s) 48, 699, 1125, 1710
StyI CCWWGG 1 cut(s) 1558
TaaI ACNGT 5 cut(s) 26, 770, 1040, 1193, 1540
TaiI ACGT 4 cut(s) 229, 432, 533, 986
TaqI TCGA 6 cut(s) 40, 164, 251, 637, 854, 1725
TatI WGTACW 3 cut(s) 352, 883, 1035
TauI GCSGC 2 cut(s) 118, 1586
TfiI GAWTC 4 cut(s) 634, 817, 851, 1554
Tru1I TTAA 7 cut(s) 11, 573, 846, 986, 1050, 1143, 1227
Tru9I TTAA 7 cut(s) 11, 573, 846, 986, 1050, 1143, 1227
TscAI CASTG 2 cut(s) 182, 747
TseFI GTSAC 2 cut(s) 359, 1524
Tsp45I GTSAC 2 cut(s) 359, 1524
TspDTI ATGAA 9 cut(s) 30, 59, 363, 578, 712, 718, 1301, 1404, 1413
TspRI CASTG 2 cut(s) 182, 747
Van91I CCANNNNNTGG 1 cut(s) 1162
VpaK11BI GGWCC 1 cut(s) 399
VspI ATTAAT 1 cut(s) 1050
XagI CCTNNNNNAGG 1 cut(s) 792
XapI RAATTY 5 cut(s) 578, 952, 1215, 1676, 1718
XhoI CTCGAG 1 cut(s) 39
XmiI GTMKAC 1 cut(s) 509
XspI CTAG 3 cut(s) 200, 452, 1740
ZrmI AGTACT 2 cut(s) 354, 1037
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.