Rmu_sc0005594.1_g000010

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005594.1
OG0000062
Physical Location & Seq
Reverse (-)
58911 .. 61082
2172 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005594.1_g000010.1.cds

Sequence Viewer

Length: 1614 bp
atgacttctaactcaaagcttcaacagagagaaaattacacattaagtgaatttccagatgaaattcttattcatatactttcatattctggaacaacatgtgctgtgaggaccaggattttgtcaaaaagatggaggaccatatgggcctctgttcccaacctagatttcgacagcaaaagttggaatgatgagcttagttttaagagatttgtcaatggtgtactttccttgcgtaacttatttgaaattaacaagtttcgtcttcattgttacgttgaggatttctctgatattaatagatggattaacactgcacttgggggtaatgttgttgaagttgatctttctatcatatcaaatagaggccagatttttgagattccaagcatagttttcacaagccatacactggcggctttgactctaaggtcaaattttattatcaaacctccaatttgtcgtttcccaagcctcaaatttctctatgtccacatttttcatccggacatggtctcgatgatgaatcttttattgaattttcctgtacttgaagaattagttatagatggaaccacgggacaggaagtatggggattggacatcaatgcactaaggctgaagaaaataacaataagattgtgcactgtacctgaacctgaaagtgacaatgaaggcggtgaagaagatggcgtggatgaaggcgatgaggaacatggtgtggatgacgggggtgaggacgaaggcagtgaagaagatagcagtgaagaagatggcagtgaacatctagaacatggtttctatatcaagtccccaaggctggaaatcctaaatcttagtatggatgttctgtcatgttttaaactcagatatgaacattgtttagtcaaagccaatatcgatctctatgatcatactgcaagtgagcaccctaaatttgctatccgtgcatcaggtcttctcaaatctgtttcggaagtgaagtatctgtctctttcagctcattatttgaaagtttcttgtctgccttcttttaataaattgaaggaattgaagctggtttctcaaggttgtcatcgattggaatcactattacttgagattctcgagaggtcacccaatctggaatgttttgtcctagatcatgagctgaagactatctccataatgagatttatgggacttccggaagagatggaagtcatgaagtacttgttgaagacgagtcgagtactaaagagcatgaccatctctatgtcaaggactaattgtggagatgcaaaggagttgcaaaggaatttgctcatgtttccaagaggttcgaaagattgtgaggtcaagcttatgttgatcttgagttcaaggccaagttctggttttcggttggaagctagagctcctctgcttgtagtggagacggttttgacatctgaggaatcgaaaggaacaatgagaagtggaaaaggggagaggttggatgaactaggaaactgcaaactggttggagtggcaactgttgatcccattgatgactttttcattaacaccttccttggcctccctactgaatgccttgcaggcatgaatgccattatttctttgtctacttcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

537

Amino Acids

60.65

Weight (kDa)

5.26

Isoelectric Point (pI)

45.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 430
AccB7I CCANNNNNTGG 2 cut(s) 412, 1373
AccI GTMKAC 1 cut(s) 1604
AccIII TCCGGA 2 cut(s) 505, 1186
AciI CCGC 2 cut(s) 416, 678
AclWI GGATC 1 cut(s) 1514
AcsI RAATTY 7 cut(s) 50, 63, 436, 479, 538, 935, 1297
AcuI CTGAAG 2 cut(s) 641, 1172
AfaI GTAC 5 cut(s) 225, 549, 651, 1211, 1233
AfiI CCNNNNNNNGG 3 cut(s) 412, 820, 1373
AflIII ACRYGT 1 cut(s) 98
AjnI CCWGG 1 cut(s) 113
AjuI GAANNNNNNNTTGG 2 cut(s) 152, 184
AluBI AGCT 8 cut(s) 19, 196, 1001, 1057, 1150, 1342, 1391, 1397
AluI AGCT 8 cut(s) 19, 196, 1001, 1057, 1150, 1342, 1391, 1397
Alw21I GWGCWC 3 cut(s) 647, 930, 1399
Alw26I GTCTC 3 cut(s) 520, 996, 1409
Alw44I GTGCAC 1 cut(s) 643
AlwI GGATC 1 cut(s) 1514
Ama87I CYCGRG 1 cut(s) 1106
Aor13HI TCCGGA 2 cut(s) 505, 1186
AoxI GGCC 4 cut(s) 147, 367, 1364, 1555
ApaLI GTGCAC 1 cut(s) 643
ApoI RAATTY 7 cut(s) 50, 63, 436, 479, 538, 935, 1297
ArsI GACNNNNNNTTYG 2 cut(s) 103, 135
AseI ATTAAT 1 cut(s) 297
AspS9I GGNCC 3 cut(s) 111, 138, 147
AsuHPI GGTGA 3 cut(s) 692, 746, 1107
AsuII TTCGAA 1 cut(s) 1322
AvaI CYCGRG 1 cut(s) 1106
AvaII GGWCC 2 cut(s) 111, 138
BaeGI GKGCMC 1 cut(s) 647
BanII GRGCYC 1 cut(s) 1399
BbsI GAAGAC 4 cut(s) 257, 950, 1160, 1226
Bbv12I GWGCWC 3 cut(s) 647, 930, 1399
BccI CCATC 7 cut(s) 126, 297, 563, 683, 767, 1189, 1256
BciT130I CCWGG 1 cut(s) 115
BclI TGATCA 1 cut(s) 910
BcoDI GTCTC 3 cut(s) 520, 996, 1409
BfaI CTAG 5 cut(s) 164, 788, 1139, 1392, 1484
BglI GCCNNNNNGGC 1 cut(s) 1578
BisI GCNGC 1 cut(s) 417
BlsI GCNGC 1 cut(s) 418
BmcAI AGTACT 2 cut(s) 1211, 1233
Bme1390I CCNGG 1 cut(s) 115
Bme18I GGWCC 2 cut(s) 111, 138
BmeT110I CYCGRG 1 cut(s) 1106
BmgT120I GGNCC 3 cut(s) 111, 138, 147
BmiI GGNNCC 1 cut(s) 574
BmrFI CCNGG 1 cut(s) 115
BmsI GCATC 2 cut(s) 959, 1267
BpiI GAAGAC 4 cut(s) 257, 950, 1160, 1226
BplI GAGNNNNNCTC 2 cut(s) 272, 304
Bpu14I TTCGAA 1 cut(s) 1322
BpuEI CTTGAG 3 cut(s) 1050, 1118, 1375
Bsa29I ATCGAT 2 cut(s) 900, 1078
BsaBI GATNNNNATC 1 cut(s) 1084
BsaI GGTCTC 1 cut(s) 520
BsaJI CCNNGG 3 cut(s) 576, 815, 1552
BsaWI WCCGGW 2 cut(s) 505, 1186
Bsc4I CCNNNNNNNGG 3 cut(s) 412, 820, 1373
Bse1I ACTGG 2 cut(s) 417, 1503
Bse8I GATNNNNATC 1 cut(s) 1084
BseAI TCCGGA 2 cut(s) 505, 1186
BseBI CCWGG 1 cut(s) 115
BseCI ATCGAT 2 cut(s) 900, 1078
BseDI CCNNGG 3 cut(s) 576, 815, 1552
BseGI GGATG 5 cut(s) 502, 703, 730, 850, 1483
BseJI GATNNNNATC 1 cut(s) 1084
BseLI CCNNNNNNNGG 3 cut(s) 412, 820, 1373
BseMII CTCAG 2 cut(s) 880, 1422
BseNI ACTGG 2 cut(s) 417, 1503
BseRI GAGGAG 1 cut(s) 1389
BseSI GKGCMC 1 cut(s) 647
BsgI GTGCAG 1 cut(s) 300
BshFI GGCC 4 cut(s) 149, 369, 1366, 1557
BshVI ATCGAT 2 cut(s) 900, 1078
BsiHKAI GWGCWC 3 cut(s) 647, 930, 1399
BsiHKCI CYCGRG 1 cut(s) 1106
BsiSI CCGG 2 cut(s) 506, 1187
BslFI GGGAC 3 cut(s) 594, 796, 1194
BslI CCNNNNNNNGG 3 cut(s) 412, 820, 1373
BsmAI GTCTC 3 cut(s) 520, 996, 1409
BsmBI CGTCTC 1 cut(s) 1409
BsmFI GGGAC 3 cut(s) 594, 796, 1194
BsmI GAATGC 2 cut(s) 1574, 1591
BsnI GGCC 4 cut(s) 149, 369, 1366, 1557
Bso31I GGTCTC 1 cut(s) 520
BsoBI CYCGRG 1 cut(s) 1106
Bsp119I TTCGAA 1 cut(s) 1322
Bsp1286I GDGCHC 3 cut(s) 647, 930, 1399
Bsp13I TCCGGA 2 cut(s) 505, 1186
Bsp143I GATC 6 cut(s) 343, 901, 910, 1141, 1350, 1519
BspACI CCGC 2 cut(s) 416, 678
BspANI GGCC 4 cut(s) 149, 369, 1366, 1557
BspCNI CTCAG 2 cut(s) 879, 1423
BspDI ATCGAT 2 cut(s) 900, 1078
BspEI TCCGGA 2 cut(s) 505, 1186
BspHI TCATGA 2 cut(s) 1144, 1203
BspLI GGNNCC 1 cut(s) 574
BspPI GGATC 1 cut(s) 1514
BspT104I TTCGAA 1 cut(s) 1322
BspTNI GGTCTC 1 cut(s) 520
BsrI ACTGG 2 cut(s) 417, 1503
BssECI CCNNGG 3 cut(s) 576, 815, 1552
BssMI GATC 6 cut(s) 343, 901, 910, 1141, 1350, 1519
BssT1I CCWWGG 2 cut(s) 815, 1552
Bst2UI CCWGG 1 cut(s) 115
Bst4CI ACNGT 3 cut(s) 649, 1420, 1516
Bst6I CTCTTC 1 cut(s) 1185
BstBI TTCGAA 1 cut(s) 1322
BstC8I GCNNGC 1 cut(s) 1579
BstDEI CTNAG 7 cut(s) 197, 428, 614, 836, 866, 1431, 1611
BstDSI CCRYGG 1 cut(s) 576
BstEII GGTNACC 1 cut(s) 1113
BstF5I GGATG 5 cut(s) 502, 703, 730, 850, 1483
BstKTI GATC 6 cut(s) 346, 904, 913, 1144, 1353, 1522
BstMAI GTCTC 3 cut(s) 520, 996, 1409
BstMBI GATC 6 cut(s) 343, 901, 910, 1141, 1350, 1519
BstMWI GCNNNNNNNGC 2 cut(s) 947, 1578
BstNI CCWGG 1 cut(s) 115
BstNSI RCATGY 1 cut(s) 102
BstPI GGTNACC 1 cut(s) 1113
BstSCI CCNGG 1 cut(s) 113
BstSLI GKGCMC 1 cut(s) 647
BstV2I GAAGAC 4 cut(s) 257, 950, 1160, 1226
Bsu15I ATCGAT 2 cut(s) 900, 1078
BsuRI GGCC 4 cut(s) 149, 369, 1366, 1557
BsuTUI ATCGAT 2 cut(s) 900, 1078
BtgI CCRYGG 1 cut(s) 576
BtgZI GCGATG 1 cut(s) 720
BtsCI GGATG 5 cut(s) 502, 703, 730, 850, 1483
BtsI GCAGTG 4 cut(s) 312, 754, 769, 784
BtsIMutI CAGTG 6 cut(s) 312, 410, 645, 754, 769, 784
Cac8I GCNNGC 1 cut(s) 1579
CciI TCATGA 2 cut(s) 1144, 1203
Cfr13I GGNCC 3 cut(s) 111, 138, 147
ClaI ATCGAT 2 cut(s) 900, 1078
Csp6I GTAC 5 cut(s) 224, 548, 650, 1210, 1232
CviQI GTAC 5 cut(s) 224, 548, 650, 1210, 1232
DdeI CTNAG 7 cut(s) 197, 428, 614, 836, 866, 1431, 1611
DpnI GATC 6 cut(s) 345, 903, 912, 1143, 1352, 1521
DpnII GATC 6 cut(s) 343, 901, 910, 1141, 1350, 1519
DraI TTTAAA 1 cut(s) 862
DrdI GACNNNNNNGTC 1 cut(s) 430
DseDI GACNNNNNNGTC 1 cut(s) 430
Eam1104I CTCTTC 1 cut(s) 1185
EarI CTCTTC 1 cut(s) 1185
Ecl136II GAGCTC 1 cut(s) 1397
Eco130I CCWWGG 2 cut(s) 815, 1552
Eco24I GRGCYC 1 cut(s) 1399
Eco31I GGTCTC 1 cut(s) 520
Eco47I GGWCC 2 cut(s) 111, 138
Eco53kI GAGCTC 1 cut(s) 1397
Eco57I CTGAAG 2 cut(s) 641, 1172
Eco88I CYCGRG 1 cut(s) 1106
Eco91I GGTNACC 1 cut(s) 1113
EcoICRI GAGCTC 1 cut(s) 1397
EcoO65I GGTNACC 1 cut(s) 1113
EcoRII CCWGG 1 cut(s) 113
EcoT14I CCWWGG 2 cut(s) 815, 1552
EcoT38I GRGCYC 1 cut(s) 1399
ErhI CCWWGG 2 cut(s) 815, 1552
Esp3I CGTCTC 1 cut(s) 1409
FalI AAGNNNNNCTT 2 cut(s) 330, 362
FaqI GGGAC 3 cut(s) 594, 796, 1194
FauNDI CATATG 1 cut(s) 143
FbaI TGATCA 1 cut(s) 910
FblI GTMKAC 1 cut(s) 1604
Fnu4HI GCNGC 1 cut(s) 417
FokI GGATG 5 cut(s) 489, 710, 737, 857, 1490
FriOI GRGCYC 1 cut(s) 1399
Fsp4HI GCNGC 1 cut(s) 417
FspBI CTAG 5 cut(s) 164, 788, 1139, 1392, 1484
GluI GCNGC 1 cut(s) 417
HaeIII GGCC 4 cut(s) 149, 369, 1366, 1557
HapII CCGG 2 cut(s) 506, 1187
HindIII AAGCTT 2 cut(s) 17, 1340
HinfI GANTC 7 cut(s) 382, 424, 526, 1085, 1102, 1225, 1436
HpaII CCGG 2 cut(s) 506, 1187
HphI GGTGA 3 cut(s) 692, 746, 1107
Hpy166II GTNNAC 5 cut(s) 224, 493, 645, 782, 1605
Hpy188I TCNGA 4 cut(s) 292, 869, 976, 1432
Hpy8I GTNNAC 5 cut(s) 224, 493, 645, 782, 1605
HpyAV CCTTC 6 cut(s) 668, 695, 737, 1038, 1039, 1558
HpyCH4III ACNGT 3 cut(s) 649, 1420, 1516
HpyCH4IV ACGT 1 cut(s) 276
HpyCH4V TGCA 9 cut(s) 317, 611, 645, 920, 950, 1280, 1291, 1494, 1577
HpyF10VI GCNNNNNNNGC 2 cut(s) 947, 1578
HpyF3I CTNAG 7 cut(s) 197, 428, 614, 836, 866, 1431, 1611
HpySE526I ACGT 1 cut(s) 276
Kpn2I TCCGGA 2 cut(s) 505, 1186
Ksp22I TGATCA 1 cut(s) 910
Kzo9I GATC 6 cut(s) 343, 901, 910, 1141, 1350, 1519
LmnI GCTCC 1 cut(s) 1402
LweI GCATC 2 cut(s) 959, 1267
MaeI CTAG 5 cut(s) 164, 788, 1139, 1392, 1484
MaeII ACGT 1 cut(s) 276
MaeIII GTNAC 4 cut(s) 236, 272, 665, 1113
MalI GATC 6 cut(s) 345, 903, 912, 1143, 1352, 1521
MboI GATC 6 cut(s) 343, 901, 910, 1141, 1350, 1519
MhlI GDGCHC 3 cut(s) 647, 930, 1399
MlyI GAGTC 2 cut(s) 418, 1234
MmeI TCCRAC 4 cut(s) 164, 1365, 1455, 1483
MroI TCCGGA 2 cut(s) 505, 1186
MseI TTAA 8 cut(s) 44, 204, 252, 297, 309, 861, 1035, 1542
MslI CAYNNNNRTG 1 cut(s) 1253
MspI CCGG 2 cut(s) 506, 1187
MspR9I CCNGG 1 cut(s) 115
Mva1269I GAATGC 2 cut(s) 1574, 1591
MvaI CCWGG 1 cut(s) 115
MwoI GCNNNNNNNGC 2 cut(s) 947, 1578
NdeI CATATG 1 cut(s) 143
NdeII GATC 6 cut(s) 343, 901, 910, 1141, 1350, 1519
NlaIV GGNNCC 1 cut(s) 574
NmuCI GTSAC 2 cut(s) 665, 1113
NspI RCATGY 1 cut(s) 102
NspV TTCGAA 1 cut(s) 1322
PaeR7I CTCGAG 1 cut(s) 1106
PagI TCATGA 2 cut(s) 1144, 1203
PciI ACATGT 1 cut(s) 98
PctI GAATGC 2 cut(s) 1574, 1591
PfeI GAWTC 5 cut(s) 382, 526, 1085, 1102, 1436
PflFI GACNNNGTC 1 cut(s) 512
PflMI CCANNNNNTGG 2 cut(s) 412, 1373
PkrI GCNGC 1 cut(s) 418
PleI GAGTC 2 cut(s) 418, 1233
PpsI GAGTC 2 cut(s) 418, 1233
PscI ACATGT 1 cut(s) 98
PshBI ATTAAT 1 cut(s) 297
Psp124BI GAGCTC 1 cut(s) 1399
Psp6I CCWGG 1 cut(s) 113
PspEI GGTNACC 1 cut(s) 1113
PspGI CCWGG 1 cut(s) 113
PspN4I GGNNCC 1 cut(s) 574
PspPI GGNCC 3 cut(s) 111, 138, 147
PsyI GACNNNGTC 1 cut(s) 512
RsaI GTAC 5 cut(s) 225, 549, 651, 1211, 1233
RsaNI GTAC 5 cut(s) 224, 548, 650, 1210, 1232
RseI CAYNNNNRTG 1 cut(s) 1253
SacI GAGCTC 1 cut(s) 1399
SaqAI TTAA 8 cut(s) 44, 204, 252, 297, 309, 861, 1035, 1542
SatI GCNGC 1 cut(s) 417
Sau3AI GATC 6 cut(s) 343, 901, 910, 1141, 1350, 1519
Sau96I GGNCC 3 cut(s) 111, 138, 147
ScaI AGTACT 2 cut(s) 1211, 1233
SchI GAGTC 2 cut(s) 418, 1234
ScrFI CCNGG 1 cut(s) 115
SduI GDGCHC 3 cut(s) 647, 930, 1399
SfaNI GCATC 2 cut(s) 959, 1267
Sfr274I CTCGAG 1 cut(s) 1106
SfuI TTCGAA 1 cut(s) 1322
SinI GGWCC 2 cut(s) 111, 138
SlaI CTCGAG 1 cut(s) 1106
SmiMI CAYNNNNRTG 1 cut(s) 1253
SmlI CTYRAG 4 cut(s) 1065, 1097, 1106, 1354
SmoI CTYRAG 4 cut(s) 1065, 1097, 1106, 1354
SsiI CCGC 2 cut(s) 416, 678
SspMI CTAG 5 cut(s) 164, 788, 1139, 1392, 1484
SstI GAGCTC 1 cut(s) 1399
StyD4I CCNGG 1 cut(s) 113
StyI CCWWGG 2 cut(s) 815, 1552
TaaI ACNGT 3 cut(s) 649, 1420, 1516
TaiI ACGT 1 cut(s) 279
TaqI TCGA 8 cut(s) 171, 518, 900, 1078, 1107, 1228, 1322, 1439
TatI WGTACW 4 cut(s) 223, 547, 1209, 1231
TauI GCSGC 1 cut(s) 419
TfiI GAWTC 5 cut(s) 382, 526, 1085, 1102, 1436
Tru1I TTAA 8 cut(s) 44, 204, 252, 297, 309, 861, 1035, 1542
Tru9I TTAA 8 cut(s) 44, 204, 252, 297, 309, 861, 1035, 1542
TscAI CASTG 6 cut(s) 319, 417, 652, 754, 769, 784
TseFI GTSAC 2 cut(s) 665, 1113
Tsp45I GTSAC 2 cut(s) 665, 1113
TspGWI ACGGA 1 cut(s) 935
TspRI CASTG 6 cut(s) 319, 417, 652, 754, 769, 784
Tth111I GACNNNGTC 1 cut(s) 512
Van91I CCANNNNNTGG 2 cut(s) 412, 1373
VneI GTGCAC 1 cut(s) 643
VpaK11BI GGWCC 2 cut(s) 111, 138
VspI ATTAAT 1 cut(s) 297
XapI RAATTY 7 cut(s) 50, 63, 436, 479, 538, 935, 1297
XbaI TCTAGA 1 cut(s) 787
XceI RCATGY 1 cut(s) 102
XhoI CTCGAG 1 cut(s) 1106
XmiI GTMKAC 1 cut(s) 1604
XspI CTAG 5 cut(s) 164, 788, 1139, 1392, 1484
ZrmI AGTACT 2 cut(s) 1211, 1233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.