Rmu_sc0008526.1_g000014

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008526.1
OG0000062
Physical Location & Seq
Forward (+)
64741 .. 66781
2041 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008526.1_g000014.1.cds

Sequence Viewer

Length: 1431 bp
atgttaagcgaattgccaaataaagttcttggtcatatactttcgttttctggaacaaaatgtgctgtgaggaccagcattttgtctaaaaaatggaggaacatatgggcaaatgtttccaatctatacttcgatgacgaaaatataaatgatgagctcggtttcaagacatttgtcaatcgtgtactttctttacacaacttattagacattaacaagttccatcttcagtgttgcgttgatgatttctctcatattgagagatggatttgcactgcacttaagcgtaatgttgttgaagttgatctttctattttatcagagggagacgagctttttgagttacccggtagacttttcactagcaaaacactgaaggctttgaccctaaggtcaaattttattattcactgtcctattgcattttgtttcccaagcctcaaatttctttatgtttatatttatcatccggacatcgagtcgttgatgagtcttctttcgtggttccctgtacttgaagatttgactttagatggaaccataggagatgaggaactgaaattggatatcattgcaccaaaactgaagacattaacaataagtttgtgcactgaacctgaagctgaaagtgatagtgaaagtgagaatgaaggcggtgaagatcatgatgtcattggtgggtgcagtttctatatcaaggccccaaaactagaaaccctaaatcttagtgtggatgatctgttagattatgaactcaaatatggaaaattactaatcacagacaatatcaatctctatcatcattctgcaagtgagcaccctacatttgctaaccgtacattggcgcttttcgaattagtttcgaatgagaagtatctgtctctttcagctcattgtttggaagttgaaagctgtgcctctactactgaacaatgctcggagaatccattggaaactccagaagctgtacctcattgtttaacgtcaaaattgaagactatcgccataatcagattcaaaggacaccgagaagagatggaagtcgtgaagtacttcttaaagaatagcctagctttgaagacgatgaccatctctgcggcgaaaattgaaaaaaataaaaataaacaaacaacagacgagatcgagagagatcgagagagagaccagagacgcgacaacgacgcgacccacttccggacgagacccagttctggtcgttctccagtccggaaacgagaccctcgatcgtttttcttctgctcgagaccctcgatcgtttctcttcctgctcgggcgcaacccagttccggtcgttcctcttctccagttcggtcgttcctcttctccagtccggtcgttcctctcctccagttcggtcggtcgttccgtcgttctgctcggaatatttgttctgatattgttatgcgatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

476

Amino Acids

54.16

Weight (kDa)

6.3

Isoelectric Point (pI)

58.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 391
AccI GTMKAC 1 cut(s) 352
AccII CGCG 2 cut(s) 1173, 1184
AccIII TCCGGA 3 cut(s) 469, 1194, 1227
AciI CCGC 2 cut(s) 654, 1097
AcsI RAATTY 2 cut(s) 397, 443
AcuI CTGAAG 4 cut(s) 212, 395, 605, 639
AfaI GTAC 5 cut(s) 186, 513, 838, 969, 1052
AfiI CCNNNNNNNGG 4 cut(s) 841, 1194, 1211, 1307
AflII CTTAAG 1 cut(s) 281
AgsI TTSAA 8 cut(s) 166, 299, 518, 908, 994, 1018, 1078, 1109
AhdI GACNNNNNGTC 1 cut(s) 478
AjuI GAANNNNNNNTTGG 2 cut(s) 113, 145
AloI GAACNNNNNNTCC 2 cut(s) 1393, 1425
AluBI AGCT 7 cut(s) 157, 334, 623, 890, 912, 965, 1073
AluI AGCT 7 cut(s) 157, 334, 623, 890, 912, 965, 1073
Alw21I GWGCWC 3 cut(s) 159, 611, 819
Alw26I GTCTC 7 cut(s) 321, 885, 1155, 1162, 1195, 1230, 1258
Alw44I GTGCAC 1 cut(s) 607
AlwNI CAGNNNCTG 1 cut(s) 965
Ama87I CYCGRG 2 cut(s) 1261, 1290
Aor13HI TCCGGA 3 cut(s) 469, 1194, 1227
AoxI GGCC 1 cut(s) 699
ApaLI GTGCAC 1 cut(s) 607
ApoI RAATTY 2 cut(s) 397, 443
ArsI GACNNNNNNTTYG 4 cut(s) 64, 96, 320, 352
Asp700I GAANNNNTTC 1 cut(s) 1052
AspLEI GCGC 2 cut(s) 847, 1297
AspS9I GGNCC 2 cut(s) 72, 700
AsuC2I CCSGG 1 cut(s) 348
AsuHPI GGTGA 1 cut(s) 668
AsuII TTCGAA 2 cut(s) 852, 863
AvaI CYCGRG 2 cut(s) 1261, 1290
AvaII GGWCC 1 cut(s) 72
AxyI CCTNAGG 1 cut(s) 389
BaeGI GKGCMC 1 cut(s) 611
BanII GRGCYC 1 cut(s) 159
BbsI GAAGAC 4 cut(s) 485, 593, 1001, 1085
Bbv12I GWGCWC 3 cut(s) 159, 611, 819
BccI CCATC 5 cut(s) 231, 258, 527, 1030, 1097
BcnI CCSGG 1 cut(s) 348
BcoDI GTCTC 7 cut(s) 321, 885, 1155, 1162, 1195, 1230, 1258
BfaI CTAG 3 cut(s) 363, 710, 1070
BfoI RGCGCY 1 cut(s) 848
BfrI CTTAAG 1 cut(s) 281
BisI GCNGC 1 cut(s) 1098
BlsI GCNGC 1 cut(s) 1099
BmcAI AGTACT 1 cut(s) 1052
Bme1390I CCNGG 1 cut(s) 348
Bme18I GGWCC 1 cut(s) 72
BmeRI GACNNNNNGTC 1 cut(s) 478
BmeT110I CYCGRG 2 cut(s) 1261, 1290
BmgT120I GGNCC 2 cut(s) 72, 700
BmiI GGNNCC 3 cut(s) 506, 538, 702
BmrFI CCNGG 1 cut(s) 348
BmrI ACTGGG 2 cut(s) 1200, 1296
BmuI ACTGGG 2 cut(s) 1200, 1296
BoxI GACNNNNGTC 1 cut(s) 173
BpiI GAAGAC 4 cut(s) 485, 593, 1001, 1085
BpmI CTGGAG 5 cut(s) 942, 1206, 1308, 1330, 1352
Bpu14I TTCGAA 2 cut(s) 852, 863
BpuMI CCSGG 1 cut(s) 348
BsaBI GATNNNNATC 1 cut(s) 1088
BsaI GGTCTC 4 cut(s) 1155, 1195, 1230, 1258
BsaWI WCCGGW 5 cut(s) 469, 1194, 1227, 1307, 1351
Bsc4I CCNNNNNNNGG 4 cut(s) 841, 1194, 1211, 1307
Bse1I ACTGG 6 cut(s) 1206, 1223, 1302, 1325, 1347, 1369
Bse21I CCTNAGG 1 cut(s) 389
Bse3DI GCAATG 1 cut(s) 570
Bse8I GATNNNNATC 1 cut(s) 1088
BseAI TCCGGA 3 cut(s) 469, 1194, 1227
BseGI GGATG 2 cut(s) 466, 739
BseJI GATNNNNATC 1 cut(s) 1088
BseLI CCNNNNNNNGG 4 cut(s) 841, 1194, 1211, 1307
BseMI GCAATG 1 cut(s) 570
BseNI ACTGG 6 cut(s) 1206, 1223, 1302, 1325, 1347, 1369
BseRI GAGGAG 1 cut(s) 1355
BseSI GKGCMC 1 cut(s) 611
BsgI GTGCAG 2 cut(s) 261, 703
Bsh1236I CGCG 2 cut(s) 1173, 1184
Bsh1285I CGRYCG 7 cut(s) 1247, 1275, 1312, 1334, 1356, 1378, 1382
BshFI GGCC 1 cut(s) 701
BsiEI CGRYCG 7 cut(s) 1247, 1275, 1312, 1334, 1356, 1378, 1382
BsiHKAI GWGCWC 3 cut(s) 159, 611, 819
BsiHKCI CYCGRG 2 cut(s) 1261, 1290
BsiSI CCGG 6 cut(s) 348, 470, 1195, 1228, 1308, 1352
BslI CCNNNNNNNGG 4 cut(s) 841, 1194, 1211, 1307
BsmAI GTCTC 7 cut(s) 321, 885, 1155, 1162, 1195, 1230, 1258
BsmBI CGTCTC 2 cut(s) 321, 1162
BsnI GGCC 1 cut(s) 701
Bso31I GGTCTC 4 cut(s) 1155, 1195, 1230, 1258
BsoBI CYCGRG 2 cut(s) 1261, 1290
Bsp119I TTCGAA 2 cut(s) 852, 863
Bsp1286I GDGCHC 3 cut(s) 159, 611, 819
Bsp13I TCCGGA 3 cut(s) 469, 1194, 1227
Bsp143I GATC 7 cut(s) 304, 661, 736, 1140, 1150, 1244, 1272
BspACI CCGC 2 cut(s) 654, 1097
BspANI GGCC 1 cut(s) 701
BspEI TCCGGA 3 cut(s) 469, 1194, 1227
BspFNI CGCG 2 cut(s) 1173, 1184
BspHI TCATGA 1 cut(s) 664
BspLI GGNNCC 3 cut(s) 506, 538, 702
BspT104I TTCGAA 2 cut(s) 852, 863
BspTI CTTAAG 1 cut(s) 281
BspTNI GGTCTC 4 cut(s) 1155, 1195, 1230, 1258
BsrDI GCAATG 1 cut(s) 570
BsrI ACTGG 6 cut(s) 1206, 1223, 1302, 1325, 1347, 1369
BssMI GATC 7 cut(s) 304, 661, 736, 1140, 1150, 1244, 1272
Bst4CI ACNGT 2 cut(s) 413, 836
Bst6I CTCTTC 4 cut(s) 1026, 1287, 1324, 1346
BstAFI CTTAAG 1 cut(s) 281
BstBI TTCGAA 2 cut(s) 852, 863
BstDEI CTNAG 2 cut(s) 389, 725
BstF5I GGATG 2 cut(s) 466, 739
BstFNI CGCG 2 cut(s) 1173, 1184
BstH2I RGCGCY 1 cut(s) 848
BstHHI GCGC 2 cut(s) 847, 1297
BstKTI GATC 7 cut(s) 307, 664, 739, 1143, 1153, 1247, 1275
BstMAI GTCTC 7 cut(s) 321, 885, 1155, 1162, 1195, 1230, 1258
BstMBI GATC 7 cut(s) 304, 661, 736, 1140, 1150, 1244, 1272
BstMCI CGRYCG 7 cut(s) 1247, 1275, 1312, 1334, 1356, 1378, 1382
BstPAI GACNNNNGTC 1 cut(s) 173
BstSCI CCNGG 1 cut(s) 346
BstSLI GKGCMC 1 cut(s) 611
BstUI CGCG 2 cut(s) 1173, 1184
BstV2I GAAGAC 4 cut(s) 485, 593, 1001, 1085
Bsu36I CCTNAGG 1 cut(s) 389
BsuRI GGCC 1 cut(s) 701
BtsCI GGATG 2 cut(s) 466, 739
BtsI GCAGTG 1 cut(s) 273
BtsIMutI CAGTG 5 cut(s) 236, 273, 371, 409, 609
CaiI CAGNNNCTG 1 cut(s) 965
CciI TCATGA 1 cut(s) 664
CfoI GCGC 2 cut(s) 847, 1297
Cfr13I GGNCC 2 cut(s) 72, 700
CseI GACGC 2 cut(s) 1179, 1190
Csp6I GTAC 5 cut(s) 185, 512, 837, 968, 1051
CviAII CATG 1 cut(s) 665
CviQI GTAC 5 cut(s) 185, 512, 837, 968, 1051
DdeI CTNAG 2 cut(s) 389, 725
DpnI GATC 7 cut(s) 306, 663, 738, 1142, 1152, 1246, 1274
DpnII GATC 7 cut(s) 304, 661, 736, 1140, 1150, 1244, 1272
DrdI GACNNNNNNGTC 1 cut(s) 391
DriI GACNNNNNGTC 1 cut(s) 478
DseDI GACNNNNNNGTC 1 cut(s) 391
Eam1104I CTCTTC 4 cut(s) 1026, 1287, 1324, 1346
Eam1105I GACNNNNNGTC 1 cut(s) 478
EarI CTCTTC 4 cut(s) 1026, 1287, 1324, 1346
Ecl136II GAGCTC 1 cut(s) 157
Eco24I GRGCYC 1 cut(s) 159
Eco31I GGTCTC 4 cut(s) 1155, 1195, 1230, 1258
Eco32I GATATC 1 cut(s) 568
Eco47I GGWCC 1 cut(s) 72
Eco53kI GAGCTC 1 cut(s) 157
Eco57I CTGAAG 4 cut(s) 212, 395, 605, 639
Eco81I CCTNAGG 1 cut(s) 389
Eco88I CYCGRG 2 cut(s) 1261, 1290
EcoICRI GAGCTC 1 cut(s) 157
EcoO109I RGGNCCY 1 cut(s) 700
EcoRV GATATC 1 cut(s) 568
EcoT38I GRGCYC 1 cut(s) 159
Esp3I CGTCTC 2 cut(s) 321, 1162
FaeI CATG 1 cut(s) 668
FalI AAGNNNNNCTT 4 cut(s) 291, 323, 1040, 1072
FatI CATG 1 cut(s) 664
FauNDI CATATG 1 cut(s) 104
FblI GTMKAC 1 cut(s) 352
Fnu4HI GCNGC 1 cut(s) 1098
FokI GGATG 2 cut(s) 453, 746
FriOI GRGCYC 1 cut(s) 159
Fsp4HI GCNGC 1 cut(s) 1098
FspBI CTAG 3 cut(s) 363, 710, 1070
GlaI GCGC 2 cut(s) 846, 1296
GluI GCNGC 1 cut(s) 1098
GsuI CTGGAG 5 cut(s) 942, 1206, 1308, 1330, 1352
HaeII RGCGCY 1 cut(s) 848
HaeIII GGCC 1 cut(s) 701
HapII CCGG 6 cut(s) 348, 470, 1195, 1228, 1308, 1352
HgaI GACGC 2 cut(s) 1179, 1190
HhaI GCGC 2 cut(s) 847, 1297
Hin1II CATG 1 cut(s) 668
Hin6I GCGC 2 cut(s) 845, 1295
HinP1I GCGC 2 cut(s) 845, 1295
HinfI GANTC 4 cut(s) 479, 490, 943, 1014
HpaII CCGG 6 cut(s) 348, 470, 1195, 1228, 1308, 1352
HphI GGTGA 1 cut(s) 668
Hpy166II GTNNAC 3 cut(s) 185, 353, 609
Hpy188I TCNGA 5 cut(s) 322, 940, 1013, 1401, 1414
Hpy8I GTNNAC 3 cut(s) 185, 353, 609
Hpy99I CGWCG 2 cut(s) 1184, 1392
HpyAV CCTTC 2 cut(s) 370, 644
HpyCH4III ACNGT 2 cut(s) 413, 836
HpyCH4IV ACGT 1 cut(s) 983
HpyCH4V TGCA 7 cut(s) 273, 278, 422, 575, 609, 684, 809
HpyF3I CTNAG 2 cut(s) 389, 725
HpySE526I ACGT 1 cut(s) 983
Hsp92II CATG 1 cut(s) 668
HspAI GCGC 2 cut(s) 845, 1295
Kpn2I TCCGGA 3 cut(s) 469, 1194, 1227
Kzo9I GATC 7 cut(s) 304, 661, 736, 1140, 1150, 1244, 1272
MaeI CTAG 3 cut(s) 363, 710, 1070
MaeII ACGT 1 cut(s) 983
MaeIII GTNAC 1 cut(s) 342
MalI GATC 7 cut(s) 306, 663, 738, 1142, 1152, 1246, 1274
MboI GATC 7 cut(s) 304, 661, 736, 1140, 1150, 1244, 1272
MhlI GDGCHC 3 cut(s) 159, 611, 819
MluCI AATT 8 cut(s) 11, 397, 443, 560, 767, 854, 989, 1104
MlyI GAGTC 2 cut(s) 488, 499
MroI TCCGGA 3 cut(s) 469, 1194, 1227
MroXI GAANNNNTTC 1 cut(s) 1052
MseI TTAA 6 cut(s) 5, 213, 282, 593, 980, 1058
MspCI CTTAAG 1 cut(s) 281
MspI CCGG 6 cut(s) 348, 470, 1195, 1228, 1308, 1352
MspR9I CCNGG 1 cut(s) 348
MvnI CGCG 2 cut(s) 1173, 1184
NciI CCSGG 1 cut(s) 348
NdeI CATATG 1 cut(s) 104
NdeII GATC 7 cut(s) 304, 661, 736, 1140, 1150, 1244, 1272
NlaIII CATG 1 cut(s) 668
NlaIV GGNNCC 3 cut(s) 506, 538, 702
NspV TTCGAA 2 cut(s) 852, 863
PaeR7I CTCGAG 1 cut(s) 1261
PagI TCATGA 1 cut(s) 664
PcsI WCGNNNNNNNCGW 3 cut(s) 1240, 1268, 1384
PdmI GAANNNNTTC 1 cut(s) 1052
PfeI GAWTC 2 cut(s) 943, 1014
PkrI GCNGC 1 cut(s) 1099
Ple19I CGATCG 2 cut(s) 1247, 1275
PleI GAGTC 2 cut(s) 487, 498
PpsI GAGTC 2 cut(s) 487, 498
PshAI GACNNNNGTC 1 cut(s) 173
Psp124BI GAGCTC 1 cut(s) 159
PspN4I GGNNCC 3 cut(s) 506, 538, 702
PspPI GGNCC 2 cut(s) 72, 700
PstNI CAGNNNCTG 1 cut(s) 965
PvuI CGATCG 2 cut(s) 1247, 1275
RsaI GTAC 5 cut(s) 186, 513, 838, 969, 1052
RsaNI GTAC 5 cut(s) 185, 512, 837, 968, 1051
SacI GAGCTC 1 cut(s) 159
SaqAI TTAA 6 cut(s) 5, 213, 282, 593, 980, 1058
SatI GCNGC 1 cut(s) 1098
Sau3AI GATC 7 cut(s) 304, 661, 736, 1140, 1150, 1244, 1272
Sau96I GGNCC 2 cut(s) 72, 700
ScaI AGTACT 1 cut(s) 1052
SchI GAGTC 2 cut(s) 488, 499
ScrFI CCNGG 1 cut(s) 348
SduI GDGCHC 3 cut(s) 159, 611, 819
Sfr274I CTCGAG 1 cut(s) 1261
SfuI TTCGAA 2 cut(s) 852, 863
SinI GGWCC 1 cut(s) 72
SlaI CTCGAG 1 cut(s) 1261
SmlI CTYRAG 2 cut(s) 281, 1261
SmoI CTYRAG 2 cut(s) 281, 1261
Sse9I AATT 8 cut(s) 11, 397, 443, 560, 767, 854, 989, 1104
SsiI CCGC 2 cut(s) 654, 1097
SspI AATATT 1 cut(s) 1405
SspMI CTAG 3 cut(s) 363, 710, 1070
SstI GAGCTC 1 cut(s) 159
StyD4I CCNGG 1 cut(s) 346
TaaI ACNGT 2 cut(s) 413, 836
TaiI ACGT 1 cut(s) 986
TaqI TCGA 9 cut(s) 132, 477, 852, 863, 1143, 1153, 1243, 1262, 1271
TaqII GACCGA 3 cut(s) 1320, 1364, 1368
TasI AATT 8 cut(s) 11, 397, 443, 560, 767, 854, 989, 1104
TatI WGTACW 3 cut(s) 184, 511, 1050
TauI GCSGC 1 cut(s) 1100
TfiI GAWTC 2 cut(s) 943, 1014
Tru1I TTAA 6 cut(s) 5, 213, 282, 593, 980, 1058
Tru9I TTAA 6 cut(s) 5, 213, 282, 593, 980, 1058
TscAI CASTG 5 cut(s) 236, 280, 378, 416, 616
TspDTI ATGAA 2 cut(s) 663, 765
TspGWI ACGGA 1 cut(s) 1376
TspRI CASTG 5 cut(s) 236, 280, 378, 416, 616
Vha464I CTTAAG 1 cut(s) 281
VneI GTGCAC 1 cut(s) 607
VpaK11BI GGWCC 1 cut(s) 72
XapI RAATTY 2 cut(s) 397, 443
XhoI CTCGAG 1 cut(s) 1261
XmiI GTMKAC 1 cut(s) 352
XmnI GAANNNNTTC 1 cut(s) 1052
XspI CTAG 3 cut(s) 363, 710, 1070
ZrmI AGTACT 1 cut(s) 1052
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.