Rh5CG306400

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000062
Physical Location & Seq
Forward (+)
33798028 .. 33810992
12965 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG306400.1

Sequence Viewer

Length: 744 bp
ATGTTGGATCTTAATCTCAACGTGGTGGGATCGTCGTCGAAACAAAACGACGTCTTCGTTGTCGGTTCGGTTCACGGTATGTTTCCGGAAGGCTCCGGCAGCGCGACGCAAATGGACGAGTCCGGGACGTCGAACTCGTCCGTTGTCAATGCCGACGCCTCCAGCACCAACGACGACTCGTGCTCCGCACCCGCCGCGGTGACGACGTTCAACTTCGATATTCTCGAGGTCGGTGGAGCAGAAGGAGAAGAAGAAGAAGAAGACGACGACGTCGTTGTGACGAAGGAGCTGTTTCCGGTGAACAGTTGGCCAGGGAAGGGTGAAGAAGAGCAGGAGAGGGCCCAGGGTTGTCCTCTGCCTTCTTTTAATAACTTGAACCATTTGAAGCTGTGTCTTTGTGATTGCAATTATGGGAGATTGCTAACAGAGTCGCTCAAGAGTTTTCCTATTCTGGAACATCTTGACATTGAATATAGGTCCCTAAGTCGTGAAGAACTTTATCTACCGGAGTTTGTGCCGTTTTGTTTGTTGTCACGTCTCAAGACTATCTCTATAAGGGGATTTGAGGGACATCAAGTTGAGATGGAAGCGGCCAAGTACTTGTTAAAGAATGGTAGACTTCTGAAAAAGATGACAATTGATACTTATTACCTGCACAACAAAATGGAGGTGCTGTATAAGGAATTTTTGATGCTTCAAAGGGGTTCACTGAATTGTCAAGTTGAATTTGTCGAAATGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AP2

Protein Analysis

247

Amino Acids

27.6

Weight (kDa)

4.6

Isoelectric Point (pI)

45.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBD PF08387 169 - 213 4.8e-16 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 269
AatII GACGTC 3 cut(s) 54, 131, 273
Acc36I ACCTGC 1 cut(s) 660
AccI GTMKAC 1 cut(s) 616
AccII CGCG 2 cut(s) 104, 197
AccIII TCCGGA 1 cut(s) 85
AciI CCGC 5 cut(s) 186, 192, 195, 197, 590
AclWI GGATC 2 cut(s) 15, 37
AcoI YGGCCR 2 cut(s) 308, 591
AcsI RAATTY 2 cut(s) 683, 725
AcyI GRCGYC 4 cut(s) 51, 128, 156, 270
AfaI GTAC 1 cut(s) 599
AfiI CCNNNNNNNGG 1 cut(s) 317
AgsI TTSAA 6 cut(s) 211, 376, 385, 470, 698, 725
AjiI CACGTC 1 cut(s) 536
AjnI CCWGG 2 cut(s) 310, 342
AluBI AGCT 2 cut(s) 289, 388
AluI AGCT 2 cut(s) 289, 388
Alw21I GWGCWC 1 cut(s) 185
Alw26I GTCTC 1 cut(s) 542
AlwI GGATC 2 cut(s) 15, 37
Ama87I CYCGRG 1 cut(s) 224
Aor13HI TCCGGA 1 cut(s) 85
AoxI GGCC 3 cut(s) 308, 339, 591
ApaI GGGCCC 1 cut(s) 343
ApeKI GCWGC 1 cut(s) 99
ApoI RAATTY 2 cut(s) 683, 725
AspLEI GCGC 1 cut(s) 104
AspS9I GGNCC 3 cut(s) 339, 340, 477
AsuC2I CCSGG 1 cut(s) 124
AsuHPI GGTGA 3 cut(s) 211, 310, 332
AvaI CYCGRG 1 cut(s) 224
AvaII GGWCC 1 cut(s) 477
BaeGI GKGCMC 1 cut(s) 343
BalI TGGCCA 1 cut(s) 310
BanII GRGCYC 1 cut(s) 343
BauI CACGAG 1 cut(s) 178
BbsI GAAGAC 2 cut(s) 46, 267
Bbv12I GWGCWC 1 cut(s) 185
BbvI GCAGC 1 cut(s) 111
BccI CCATC 1 cut(s) 577
BceAI ACGGC 1 cut(s) 502
BciT130I CCWGG 2 cut(s) 312, 344
BcnI CCSGG 1 cut(s) 124
BcoDI GTCTC 1 cut(s) 542
BfuAI ACCTGC 1 cut(s) 660
BisI GCNGC 3 cut(s) 100, 195, 591
BlsI GCNGC 3 cut(s) 101, 196, 592
BmcAI AGTACT 1 cut(s) 599
Bme1390I CCNGG 3 cut(s) 124, 312, 344
Bme18I GGWCC 1 cut(s) 477
BmeT110I CYCGRG 1 cut(s) 224
BmgBI CACGTC 1 cut(s) 536
BmgT120I GGNCC 3 cut(s) 339, 340, 477
BmiI GGNNCC 3 cut(s) 94, 341, 479
BmrFI CCNGG 3 cut(s) 124, 312, 344
BmsI GCATC 1 cut(s) 681
BpiI GAAGAC 2 cut(s) 46, 267
BpmI CTGGAG 1 cut(s) 145
BpuEI CTTGAG 2 cut(s) 419, 524
BpuMI CCSGG 1 cut(s) 124
BsaBI GATNNNNATC 1 cut(s) 12
BsaHI GRCGYC 4 cut(s) 51, 128, 156, 270
BsaJI CCNNGG 4 cut(s) 195, 311, 342, 343
BsaWI WCCGGW 3 cut(s) 85, 295, 505
BsaXI ACNNNNNCTCC 4 cut(s) 167, 197, 659, 689
Bsc4I CCNNNNNNNGG 1 cut(s) 317
Bse8I GATNNNNATC 1 cut(s) 12
BseAI TCCGGA 1 cut(s) 85
BseBI CCWGG 2 cut(s) 312, 344
BseDI CCNNGG 4 cut(s) 195, 311, 342, 343
BseJI GATNNNNATC 1 cut(s) 12
BseLI CCNNNNNNNGG 1 cut(s) 317
BseSI GKGCMC 1 cut(s) 343
BseXI GCAGC 1 cut(s) 111
BsgI GTGCAG 1 cut(s) 638
Bsh1236I CGCG 2 cut(s) 104, 197
BshFI GGCC 3 cut(s) 310, 341, 593
BsiHKAI GWGCWC 1 cut(s) 185
BsiHKCI CYCGRG 1 cut(s) 224
BsiSI CCGG 5 cut(s) 86, 96, 123, 296, 506
BslFI GGGAC 3 cut(s) 139, 463, 582
BslI CCNNNNNNNGG 1 cut(s) 317
BsmAI GTCTC 1 cut(s) 542
BsmBI CGTCTC 1 cut(s) 542
BsmFI GGGAC 3 cut(s) 139, 463, 582
BsnI GGCC 3 cut(s) 310, 341, 593
BsoBI CYCGRG 1 cut(s) 224
Bsp120I GGGCCC 1 cut(s) 339
Bsp1286I GDGCHC 2 cut(s) 185, 343
Bsp13I TCCGGA 1 cut(s) 85
Bsp143I GATC 2 cut(s) 7, 29
BspACI CCGC 5 cut(s) 186, 192, 195, 197, 590
BspANI GGCC 3 cut(s) 310, 341, 593
BspEI TCCGGA 1 cut(s) 85
BspFNI CGCG 2 cut(s) 104, 197
BspLI GGNNCC 3 cut(s) 94, 341, 479
BspMI ACCTGC 1 cut(s) 660
BspPI GGATC 2 cut(s) 15, 37
BspQI GCTCTTC 1 cut(s) 321
BssECI CCNNGG 4 cut(s) 195, 311, 342, 343
BssMI GATC 2 cut(s) 7, 29
BssNI GRCGYC 4 cut(s) 51, 128, 156, 270
BssSI CACGAG 1 cut(s) 178
Bst2BI CACGAG 1 cut(s) 178
Bst2UI CCWGG 2 cut(s) 312, 344
Bst4CI ACNGT 2 cut(s) 77, 305
Bst6I CTCTTC 1 cut(s) 321
BstACI GRCGYC 4 cut(s) 51, 128, 156, 270
BstDEI CTNAG 1 cut(s) 482
BstDSI CCRYGG 1 cut(s) 195
BstFNI CGCG 2 cut(s) 104, 197
BstHHI GCGC 1 cut(s) 104
BstKTI GATC 2 cut(s) 10, 32
BstMAI GTCTC 1 cut(s) 542
BstMBI GATC 2 cut(s) 7, 29
BstMWI GCNNNNNNNGC 2 cut(s) 99, 194
BstNI CCWGG 2 cut(s) 312, 344
BstSCI CCNGG 3 cut(s) 122, 310, 342
BstSLI GKGCMC 1 cut(s) 343
BstUI CGCG 2 cut(s) 104, 197
BstV1I GCAGC 1 cut(s) 111
BstV2I GAAGAC 2 cut(s) 46, 267
BstX2I RGATCY 1 cut(s) 7
BstYI RGATCY 1 cut(s) 7
BsuRI GGCC 3 cut(s) 310, 341, 593
BtgI CCRYGG 1 cut(s) 195
BtrI CACGTC 1 cut(s) 536
BtsIMutI CAGTG 1 cut(s) 707
BveI ACCTGC 1 cut(s) 660
CfoI GCGC 1 cut(s) 104
Cfr13I GGNCC 3 cut(s) 339, 340, 477
Cfr42I CCGCGG 1 cut(s) 198
CseI GACGC 2 cut(s) 115, 164
Csp6I GTAC 1 cut(s) 598
CviJI RGCY 6 cut(s) 93, 289, 310, 341, 388, 593
CviKI_1 RGCY 6 cut(s) 93, 289, 310, 341, 388, 593
CviQI GTAC 1 cut(s) 598
DdeI CTNAG 1 cut(s) 482
DpnI GATC 2 cut(s) 9, 31
DpnII GATC 2 cut(s) 7, 29
DrdI GACNNNNNNGTC 1 cut(s) 269
DseDI GACNNNNNNGTC 1 cut(s) 269
EaeI YGGCCR 2 cut(s) 308, 591
Eam1104I CTCTTC 1 cut(s) 321
EarI CTCTTC 1 cut(s) 321
Eco24I GRGCYC 1 cut(s) 343
Eco47I GGWCC 1 cut(s) 477
Eco88I CYCGRG 1 cut(s) 224
EcoO109I RGGNCCY 2 cut(s) 339, 477
EcoRII CCWGG 2 cut(s) 310, 342
EcoT38I GRGCYC 1 cut(s) 343
Esp3I CGTCTC 1 cut(s) 542
FaiI YATR 5 cut(s) 80, 411, 474, 554, 678
FaqI GGGAC 3 cut(s) 139, 463, 582
FauI CCCGC 1 cut(s) 199
FblI GTMKAC 1 cut(s) 616
Fnu4HI GCNGC 3 cut(s) 100, 195, 591
FriOI GRGCYC 1 cut(s) 343
Fsp4HI GCNGC 3 cut(s) 100, 195, 591
GlaI GCGC 1 cut(s) 103
GluI GCNGC 3 cut(s) 100, 195, 591
GsuI CTGGAG 1 cut(s) 145
HaeIII GGCC 3 cut(s) 310, 341, 593
HapII CCGG 5 cut(s) 86, 96, 123, 296, 506
HgaI GACGC 2 cut(s) 115, 164
HhaI GCGC 1 cut(s) 104
Hin1I GRCGYC 4 cut(s) 51, 128, 156, 270
Hin6I GCGC 1 cut(s) 102
HinP1I GCGC 1 cut(s) 102
HinfI GANTC 3 cut(s) 119, 176, 428
HpaII CCGG 5 cut(s) 86, 96, 123, 296, 506
HphI GGTGA 3 cut(s) 211, 310, 332
Hpy166II GTNNAC 4 cut(s) 73, 301, 617, 707
Hpy188I TCNGA 1 cut(s) 624
Hpy188III TCNNGA 7 cut(s) 86, 224, 436, 452, 461, 488, 541
Hpy8I GTNNAC 4 cut(s) 73, 301, 617, 707
HpyAV CCTTC 5 cut(s) 83, 236, 277, 310, 369
HpyCH4III ACNGT 2 cut(s) 77, 305
HpyCH4IV ACGT 6 cut(s) 21, 51, 128, 206, 270, 535
HpyCH4V TGCA 2 cut(s) 405, 655
HpyF10VI GCNNNNNNNGC 2 cut(s) 99, 194
HpyF3I CTNAG 1 cut(s) 482
HpySE526I ACGT 6 cut(s) 21, 51, 128, 206, 270, 535
Hsp92I GRCGYC 4 cut(s) 51, 128, 156, 270
HspAI GCGC 1 cut(s) 102
Kpn2I TCCGGA 1 cut(s) 85
KspI CCGCGG 1 cut(s) 198
Kzo9I GATC 2 cut(s) 7, 29
LguI GCTCTTC 1 cut(s) 321
LmnI GCTCC 4 cut(s) 98, 188, 236, 286
Lsp1109I GCAGC 1 cut(s) 111
LweI GCATC 1 cut(s) 681
MaeII ACGT 6 cut(s) 21, 51, 128, 206, 270, 535
MaeIII GTNAC 3 cut(s) 199, 277, 531
MalI GATC 2 cut(s) 9, 31
MboI GATC 2 cut(s) 7, 29
MboII GAAGA 9 cut(s) 46, 260, 263, 266, 269, 272, 335, 338, 503
MfeI CAATTG 1 cut(s) 636
MflI RGATCY 1 cut(s) 7
MhlI GDGCHC 2 cut(s) 185, 343
MlsI TGGCCA 1 cut(s) 310
MluCI AATT 5 cut(s) 406, 636, 683, 712, 725
MluNI TGGCCA 1 cut(s) 310
MlyI GAGTC 3 cut(s) 128, 170, 437
MnlI CCTC 6 cut(s) 169, 220, 330, 363, 559, 661
Mox20I TGGCCA 1 cut(s) 310
MroI TCCGGA 1 cut(s) 85
MscI TGGCCA 1 cut(s) 310
MseI TTAA 3 cut(s) 12, 366, 605
Msp20I TGGCCA 1 cut(s) 310
MspA1I CMGCKG 1 cut(s) 197
MspI CCGG 5 cut(s) 86, 96, 123, 296, 506
MspR9I CCNGG 3 cut(s) 124, 312, 344
MunI CAATTG 1 cut(s) 636
MvaI CCWGG 2 cut(s) 312, 344
MvnI CGCG 2 cut(s) 104, 197
MwoI GCNNNNNNNGC 2 cut(s) 99, 194
NciI CCSGG 1 cut(s) 124
NdeII GATC 2 cut(s) 7, 29
NlaIV GGNNCC 3 cut(s) 94, 341, 479
NmuCI GTSAC 3 cut(s) 199, 277, 531
PaeR7I CTCGAG 1 cut(s) 224
PasI CCCWGGG 1 cut(s) 343
PciSI GCTCTTC 1 cut(s) 321
PcsI WCGNNNNNNNCGW 4 cut(s) 54, 134, 222, 270
PflFI GACNNNGTC 1 cut(s) 269
PfoI TCCNGGA 1 cut(s) 122
PkrI GCNGC 3 cut(s) 101, 196, 592
PleI GAGTC 3 cut(s) 127, 170, 436
PpsI GAGTC 3 cut(s) 127, 170, 436
PpuMI RGGWCCY 1 cut(s) 477
Psp5II RGGWCCY 1 cut(s) 477
Psp6I CCWGG 2 cut(s) 310, 342
PspGI CCWGG 2 cut(s) 310, 342
PspN4I GGNNCC 3 cut(s) 94, 341, 479
PspOMI GGGCCC 1 cut(s) 339
PspPI GGNCC 3 cut(s) 339, 340, 477
PspPPI RGGWCCY 1 cut(s) 477
PsrI GAACNNNNNNTAC 2 cut(s) 486, 518
PsuI RGATCY 1 cut(s) 7
PsyI GACNNNGTC 1 cut(s) 269
RsaI GTAC 1 cut(s) 599
RsaNI GTAC 1 cut(s) 598
SacII CCGCGG 1 cut(s) 198
SapI GCTCTTC 1 cut(s) 321
SaqAI TTAA 3 cut(s) 12, 366, 605
SatI GCNGC 3 cut(s) 100, 195, 591
Sau3AI GATC 2 cut(s) 7, 29
Sau96I GGNCC 3 cut(s) 339, 340, 477
ScaI AGTACT 1 cut(s) 599
SchI GAGTC 3 cut(s) 128, 170, 437
ScrFI CCNGG 3 cut(s) 124, 312, 344
SduI GDGCHC 2 cut(s) 185, 343
SfaNI GCATC 1 cut(s) 681
Sfr274I CTCGAG 1 cut(s) 224
Sfr303I CCGCGG 1 cut(s) 198
SgrBI CCGCGG 1 cut(s) 198
SinI GGWCC 1 cut(s) 477
SlaI CTCGAG 1 cut(s) 224
SmlI CTYRAG 3 cut(s) 224, 434, 539
SmoI CTYRAG 3 cut(s) 224, 434, 539
Sse9I AATT 5 cut(s) 406, 636, 683, 712, 725
SsiI CCGC 5 cut(s) 186, 192, 195, 197, 590
StyD4I CCNGG 3 cut(s) 122, 310, 342
TaaI ACNGT 2 cut(s) 77, 305
TaiI ACGT 6 cut(s) 24, 54, 131, 209, 273, 538
TaqI TCGA 5 cut(s) 38, 131, 216, 225, 732
TasI AATT 5 cut(s) 406, 636, 683, 712, 725
TatI WGTACW 1 cut(s) 597
TauI GCSGC 2 cut(s) 197, 593
Tru1I TTAA 3 cut(s) 12, 366, 605
Tru9I TTAA 3 cut(s) 12, 366, 605
TscAI CASTG 1 cut(s) 714
TseFI GTSAC 3 cut(s) 199, 277, 531
TseI GCWGC 1 cut(s) 99
Tsp45I GTSAC 3 cut(s) 199, 277, 531
TspGWI ACGGA 1 cut(s) 130
TspRI CASTG 1 cut(s) 714
Tth111I GACNNNGTC 1 cut(s) 269
VpaK11BI GGWCC 1 cut(s) 477
XapI RAATTY 2 cut(s) 683, 725
XhoI CTCGAG 1 cut(s) 224
XmiI GTMKAC 1 cut(s) 616
ZraI GACGTC 3 cut(s) 52, 129, 271
ZrmI AGTACT 1 cut(s) 599
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.