AT5G53635

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000062
Physical Location & Seq
Reverse (-)
21785999 .. 21787444
1446 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G53635.1

Sequence Viewer

Length: 1281 bp
ATGATAAGCCAATTACCTGATCCTTTGATCTGTCACATACTTTCTCATCTTCCCATAAAGGACCTTGTTACGACACGCGTGTTATCCACCAGATGGAGGAGTCTCTGGCTTTGGCTTCCTTGTTTGGAACTGAATTCCTTATACTTCCCAGATTTCAATGCCTTTGTGAGTTTTGGTGACAAGTTTTTCGATTCCAATAGGGTTTCATGCATAAACAAGTTCAAGTTATATATTTATGGTTATGACGTTGGTGTAGATGACCCCTCTTATCTCACGTCATGGATTGATGCTGCAGTTAAGTGTAAGATCCAACATCTACATGTTCAGTGTCTTCCAGCTAAATATATTTATGAGATGCCCCTAAGCCTTTACATATGTGAGACACTAGTCTACTTAAAACTCTGTAGGGTGATGTTGGATGATGCCGAGTTTGTTTCCTTACCTTGTCTGAAGACTATCCATTTAGAATATGTTTGGTTTCCCAATGAGGCAAATCTTGAGAGATTTGTATCTTGCTGTCCTGTCTTGGAAGAGTTAAAGATTTATGGATGTGGGAATGAGAATGCAATAACCTTACGGTTGCTCTCTAGATCACTGAAGAAGCTGAGTATAAACATTCTTAAATCTATGTGTGATTTTCATTCAGAAGTTGTGATTGATGCTCCTCTACTAAGTTATTTGAAAATCAATGATAACGTATCAGAACGCTATATAGTAAACAATTTGGAGTCCAATGCCAAATTAGATATTTCTCTCCCCTTTGGTTTGCTAGATTTTGATGAAGCAAGTGTTTCATCGAGGACAGATAGCATCCACAGTTTTCTCCGCGGTATTTTGAAAGTCAGCGATATGACAATTTGGGTGGACACTTTCAAGCTCATATGTAAATACTCAGAACTAGAATCGCTGCCTCGGTTTGGTTACATGTCACGCCTGCATGTTACTCTTTGTATATATGATTTGAAATGGTTACCAACATTTCTTGAGAGCTGTCCAAACTTGAAATCTCTCATCTTGGTATGTGTTGGTGATAATGATGAAATGCTTTCGGAGGAGATGATTCAATTCGGTTCTTCATTGGTACCTGAGTGTTTGCTATCGTCTCTCGAGTTTGTTGATATTCGAATACCGTTCCGGGGACATCTTGAAGTAATGAAGCTAGTAAGGTACTTTCTAGAGAATTCGGCTATCCTCAAGAAACTCTCTCTAGATCATGACATCTTCAAGAAACTCTTCACAATACCAAGACGCTCTACCAAGTGTCAAGTCGTCTTCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

426

Amino Acids

49.27

Weight (kDa)

5.97

Isoelectric Point (pI)

40.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 2 - 41 6.4e-10 F-box domain
LRR_At1g61320_AtMIF1 PF23622 72 - 406 3.6e-15 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 92 - 231 3.7e-15 FBD-associated F-box protein At5g56370, LRR repeats
LRR_2 PF07723 149 - 174 2.3e-09 Leucine Rich Repeat
FBD PF08387 359 - 403 1.1e-15 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1081
AccB1I GGYRCC 1 cut(s) 1081
AccB7I CCANNNNNTGG 1 cut(s) 93
AccI GTMKAC 1 cut(s) 390
AccII CGCG 2 cut(s) 78, 828
AciI CCGC 2 cut(s) 826, 828
AclWI GGATC 2 cut(s) 14, 301
AcsI RAATTY 2 cut(s) 133, 1180
AcuI CTGAAG 2 cut(s) 470, 617
AfaI GTAC 2 cut(s) 1083, 1169
AfiI CCNNNNNNNGG 4 cut(s) 93, 96, 917, 1136
AflIII ACRYGT 3 cut(s) 76, 319, 924
AhlI ACTAGT 1 cut(s) 385
AjiI CACGTC 1 cut(s) 276
AluBI AGCT 5 cut(s) 338, 604, 877, 990, 1159
AluI AGCT 5 cut(s) 338, 604, 877, 990, 1159
Alw26I GTCTC 3 cut(s) 107, 374, 1107
AlwI GGATC 2 cut(s) 14, 301
Ama87I CYCGRG 1 cut(s) 1106
ApeKI GCWGC 2 cut(s) 290, 907
ApoI RAATTY 2 cut(s) 133, 1180
ArsI GACNNNNNNTTYG 2 cut(s) 170, 202
Asp700I GAANNNNTTC 1 cut(s) 1232
Asp718I GGTACC 1 cut(s) 1081
AspS9I GGNCC 1 cut(s) 61
AsuC2I CCSGG 1 cut(s) 1136
AsuHPI GGTGA 3 cut(s) 188, 421, 1040
AsuII TTCGAA 1 cut(s) 1123
AvaI CYCGRG 1 cut(s) 1106
AvaII GGWCC 1 cut(s) 61
BaeI ACNNNNGTAYC 2 cut(s) 1073, 1106
BanI GGYRCC 1 cut(s) 1081
BbsI GAAGAC 3 cut(s) 323, 458, 1264
BbvI GCAGC 2 cut(s) 277, 894
BccI CCATC 1 cut(s) 87
BcnI CCSGG 1 cut(s) 1136
BcoDI GTCTC 3 cut(s) 107, 374, 1107
BcuI ACTAGT 1 cut(s) 385
BfaI CTAG 7 cut(s) 386, 588, 770, 899, 1160, 1175, 1208
BfmI CTRYAG 2 cut(s) 291, 403
BisI GCNGC 2 cut(s) 291, 908
BlsI GCNGC 2 cut(s) 292, 909
Bme1390I CCNGG 1 cut(s) 1136
Bme18I GGWCC 1 cut(s) 61
BmeT110I CYCGRG 1 cut(s) 1106
BmgBI CACGTC 1 cut(s) 276
BmgT120I GGNCC 1 cut(s) 61
BmiI GGNNCC 1 cut(s) 1083
BmrFI CCNGG 1 cut(s) 1136
BmsI GCATC 5 cut(s) 277, 345, 412, 649, 819
BoxI GACNNNNGTC 1 cut(s) 386
BpiI GAAGAC 3 cut(s) 323, 458, 1264
Bpu10I CCTNAGC 1 cut(s) 362
Bpu14I TTCGAA 1 cut(s) 1123
BpuEI CTTGAG 3 cut(s) 518, 1004, 1178
BpuMI CCSGG 1 cut(s) 1136
BsaBI GATNNNNATC 1 cut(s) 508
BsaJI CCNNGG 3 cut(s) 826, 911, 1135
Bsc4I CCNNNNNNNGG 4 cut(s) 93, 96, 917, 1136
Bse8I GATNNNNATC 1 cut(s) 508
BseDI CCNNGG 3 cut(s) 826, 911, 1135
BseGI GGATG 3 cut(s) 424, 554, 810
BseJI GATNNNNATC 1 cut(s) 508
BseLI CCNNNNNNNGG 4 cut(s) 93, 96, 917, 1136
BseMII CTCAG 3 cut(s) 596, 906, 1077
BseRI GAGGAG 3 cut(s) 112, 654, 1067
BseXI GCAGC 2 cut(s) 277, 894
Bsh1236I CGCG 2 cut(s) 78, 828
BshNI GGYRCC 1 cut(s) 1081
BsiHKCI CYCGRG 1 cut(s) 1106
BsiSI CCGG 1 cut(s) 1135
BslFI GGGAC 1 cut(s) 1152
BslI CCNNNNNNNGG 4 cut(s) 93, 96, 917, 1136
BsmAI GTCTC 3 cut(s) 107, 374, 1107
BsmBI CGTCTC 1 cut(s) 1107
BsmFI GGGAC 1 cut(s) 1152
BsmI GAATGC 1 cut(s) 568
BsoBI CYCGRG 1 cut(s) 1106
Bsp119I TTCGAA 1 cut(s) 1123
Bsp143I GATC 5 cut(s) 19, 27, 306, 590, 1210
BspACI CCGC 2 cut(s) 826, 828
BspCNI CTCAG 3 cut(s) 597, 905, 1078
BspFNI CGCG 2 cut(s) 78, 828
BspHI TCATGA 1 cut(s) 1213
BspLI GGNNCC 1 cut(s) 1083
BspMAI CTGCAG 1 cut(s) 295
BspPI GGATC 2 cut(s) 14, 301
BspT104I TTCGAA 1 cut(s) 1123
BspT107I GGYRCC 1 cut(s) 1081
BssECI CCNNGG 3 cut(s) 826, 911, 1135
BssMI GATC 5 cut(s) 19, 27, 306, 590, 1210
Bst4CI ACNGT 3 cut(s) 579, 818, 1131
Bst6I CTCTTC 2 cut(s) 525, 1238
BstBI TTCGAA 1 cut(s) 1123
BstC8I GCNNGC 1 cut(s) 935
BstDEI CTNAG 5 cut(s) 362, 605, 671, 892, 1086
BstDSI CCRYGG 1 cut(s) 826
BstEII GGTNACC 1 cut(s) 969
BstF5I GGATG 3 cut(s) 424, 554, 810
BstFNI CGCG 2 cut(s) 78, 828
BstKTI GATC 5 cut(s) 22, 30, 309, 593, 1213
BstMAI GTCTC 3 cut(s) 107, 374, 1107
BstMBI GATC 5 cut(s) 19, 27, 306, 590, 1210
BstNSI RCATGY 3 cut(s) 323, 928, 941
BstPAI GACNNNNGTC 1 cut(s) 386
BstPI GGTNACC 1 cut(s) 969
BstSCI CCNGG 1 cut(s) 1134
BstSFI CTRYAG 2 cut(s) 291, 403
BstUI CGCG 2 cut(s) 78, 828
BstV1I GCAGC 2 cut(s) 277, 894
BstV2I GAAGAC 3 cut(s) 323, 458, 1264
BstX2I RGATCY 1 cut(s) 306
BstYI RGATCY 1 cut(s) 306
BtgI CCRYGG 1 cut(s) 826
BtrI CACGTC 1 cut(s) 276
BtsCI GGATG 3 cut(s) 424, 554, 810
BtsIMutI CAGTG 2 cut(s) 332, 593
Cac8I GCNNGC 1 cut(s) 935
CciI TCATGA 1 cut(s) 1213
Cfr13I GGNCC 1 cut(s) 61
Cfr42I CCGCGG 1 cut(s) 829
CseI GACGC 1 cut(s) 1257
Csp6I GTAC 2 cut(s) 1082, 1168
CspCI CAANNNNNGTGG 2 cut(s) 843, 878
CviAII CATG 6 cut(s) 207, 279, 320, 925, 938, 1214
CviQI GTAC 2 cut(s) 1082, 1168
DdeI CTNAG 5 cut(s) 362, 605, 671, 892, 1086
DpnI GATC 5 cut(s) 21, 29, 308, 592, 1212
DpnII GATC 5 cut(s) 19, 27, 306, 590, 1210
Eam1104I CTCTTC 2 cut(s) 525, 1238
EarI CTCTTC 2 cut(s) 525, 1238
Eco47I GGWCC 1 cut(s) 61
Eco57I CTGAAG 2 cut(s) 470, 617
Eco88I CYCGRG 1 cut(s) 1106
Eco91I GGTNACC 1 cut(s) 969
EcoO109I RGGNCCY 1 cut(s) 61
EcoO65I GGTNACC 1 cut(s) 969
EcoRI GAATTC 2 cut(s) 133, 1180
EcoT22I ATGCAT 1 cut(s) 212
Esp3I CGTCTC 1 cut(s) 1107
FaeI CATG 6 cut(s) 210, 282, 323, 928, 941, 1217
FalI AAGNNNNNCTT 2 cut(s) 1217, 1249
FaqI GGGAC 1 cut(s) 1152
FatI CATG 6 cut(s) 206, 278, 319, 924, 937, 1213
FauNDI CATATG 2 cut(s) 374, 881
FblI GTMKAC 1 cut(s) 390
Fnu4HI GCNGC 2 cut(s) 291, 908
FokI GGATG 3 cut(s) 431, 561, 797
Fsp4HI GCNGC 2 cut(s) 291, 908
FspBI CTAG 7 cut(s) 386, 588, 770, 899, 1160, 1175, 1208
GluI GCNGC 2 cut(s) 291, 908
HapII CCGG 1 cut(s) 1135
HgaI GACGC 1 cut(s) 1257
Hin1II CATG 6 cut(s) 210, 282, 323, 928, 941, 1217
HinfI GANTC 5 cut(s) 100, 191, 728, 902, 1060
HpaII CCGG 1 cut(s) 1135
HphI GGTGA 3 cut(s) 188, 421, 1040
Hpy166II GTNNAC 3 cut(s) 391, 718, 865
Hpy188I TCNGA 5 cut(s) 450, 646, 703, 895, 1051
Hpy8I GTNNAC 3 cut(s) 391, 718, 865
HpyCH4III ACNGT 3 cut(s) 579, 818, 1131
HpyCH4IV ACGT 3 cut(s) 246, 275, 696
HpyCH4V TGCA 4 cut(s) 210, 293, 566, 937
HpyF3I CTNAG 5 cut(s) 362, 605, 671, 892, 1086
HpySE526I ACGT 3 cut(s) 246, 275, 696
Hsp92II CATG 6 cut(s) 210, 282, 323, 928, 941, 1217
KpnI GGTACC 1 cut(s) 1085
KspI CCGCGG 1 cut(s) 829
Kzo9I GATC 5 cut(s) 19, 27, 306, 590, 1210
LmnI GCTCC 1 cut(s) 667
LpnPI CCDG 9 cut(s) 30, 91, 103, 162, 348, 534, 947, 1098, 1148
Lsp1109I GCAGC 2 cut(s) 277, 894
LweI GCATC 5 cut(s) 277, 345, 412, 649, 819
MaeI CTAG 7 cut(s) 386, 588, 770, 899, 1160, 1175, 1208
MaeII ACGT 3 cut(s) 246, 275, 696
MaeIII GTNAC 7 cut(s) 32, 67, 176, 920, 927, 940, 969
MalI GATC 5 cut(s) 21, 29, 308, 592, 1212
MboI GATC 5 cut(s) 19, 27, 306, 590, 1210
MboII GAAGA 9 cut(s) 41, 323, 463, 542, 610, 1065, 1213, 1225, 1264
MflI RGATCY 1 cut(s) 306
MluCI AATT 7 cut(s) 11, 133, 721, 740, 855, 1064, 1180
MluI ACGCGT 1 cut(s) 76
MlyI GAGTC 2 cut(s) 109, 737
MmeI TCCRAC 2 cut(s) 334, 396
MnlI CCTC 8 cut(s) 90, 274, 481, 675, 792, 921, 1045, 1202
Mph1103I ATGCAT 1 cut(s) 212
MroXI GAANNNNTTC 1 cut(s) 1232
MseI TTAA 4 cut(s) 297, 395, 536, 621
MslI CAYNNNNRTG 1 cut(s) 318
MspA1I CMGCKG 1 cut(s) 828
MspI CCGG 1 cut(s) 1135
MspR9I CCNGG 1 cut(s) 1136
Mva1269I GAATGC 1 cut(s) 568
MvnI CGCG 2 cut(s) 78, 828
NciI CCSGG 1 cut(s) 1136
NdeI CATATG 2 cut(s) 374, 881
NdeII GATC 5 cut(s) 19, 27, 306, 590, 1210
NlaIII CATG 6 cut(s) 210, 282, 323, 928, 941, 1217
NlaIV GGNNCC 1 cut(s) 1083
NmeAIII GCCGAG 1 cut(s) 451
NmuCI GTSAC 3 cut(s) 32, 176, 927
NsiI ATGCAT 1 cut(s) 212
NspI RCATGY 3 cut(s) 323, 928, 941
NspV TTCGAA 1 cut(s) 1123
PaeR7I CTCGAG 1 cut(s) 1106
PagI TCATGA 1 cut(s) 1213
PciI ACATGT 2 cut(s) 319, 924
PctI GAATGC 1 cut(s) 568
PdmI GAANNNNTTC 1 cut(s) 1232
PfeI GAWTC 3 cut(s) 191, 902, 1060
PflMI CCANNNNNTGG 1 cut(s) 93
PkrI GCNGC 2 cut(s) 292, 909
PleI GAGTC 2 cut(s) 108, 736
PpsI GAGTC 2 cut(s) 108, 736
PpuMI RGGWCCY 1 cut(s) 61
PscI ACATGT 2 cut(s) 319, 924
PshAI GACNNNNGTC 1 cut(s) 386
Psp5II RGGWCCY 1 cut(s) 61
PspEI GGTNACC 1 cut(s) 969
PspN4I GGNNCC 1 cut(s) 1083
PspPI GGNCC 1 cut(s) 61
PspPPI RGGWCCY 1 cut(s) 61
PstI CTGCAG 1 cut(s) 295
PsuI RGATCY 1 cut(s) 306
RsaI GTAC 2 cut(s) 1083, 1169
RsaNI GTAC 2 cut(s) 1082, 1168
RseI CAYNNNNRTG 1 cut(s) 318
SacII CCGCGG 1 cut(s) 829
SaqAI TTAA 4 cut(s) 297, 395, 536, 621
SatI GCNGC 2 cut(s) 291, 908
Sau3AI GATC 5 cut(s) 19, 27, 306, 590, 1210
Sau96I GGNCC 1 cut(s) 61
SchI GAGTC 2 cut(s) 109, 737
ScrFI CCNGG 1 cut(s) 1136
SfaNI GCATC 5 cut(s) 277, 345, 412, 649, 819
SfcI CTRYAG 2 cut(s) 291, 403
Sfr274I CTCGAG 1 cut(s) 1106
Sfr303I CCGCGG 1 cut(s) 829
SfuI TTCGAA 1 cut(s) 1123
SgrBI CCGCGG 1 cut(s) 829
SinI GGWCC 1 cut(s) 61
SlaI CTCGAG 1 cut(s) 1106
SmiMI CAYNNNNRTG 1 cut(s) 318
SmlI CTYRAG 4 cut(s) 497, 983, 1106, 1193
SmoI CTYRAG 4 cut(s) 497, 983, 1106, 1193
SpeI ACTAGT 1 cut(s) 385
Sse9I AATT 7 cut(s) 11, 133, 721, 740, 855, 1064, 1180
SsiI CCGC 2 cut(s) 826, 828
SspMI CTAG 7 cut(s) 386, 588, 770, 899, 1160, 1175, 1208
StyD4I CCNGG 1 cut(s) 1134
TaaI ACNGT 3 cut(s) 579, 818, 1131
TaiI ACGT 3 cut(s) 249, 278, 699
TaqI TCGA 4 cut(s) 189, 797, 1107, 1123
TasI AATT 7 cut(s) 11, 133, 721, 740, 855, 1064, 1180
TfiI GAWTC 3 cut(s) 191, 902, 1060
Tru1I TTAA 4 cut(s) 297, 395, 536, 621
Tru9I TTAA 4 cut(s) 297, 395, 536, 621
TscAI CASTG 2 cut(s) 332, 600
TseFI GTSAC 3 cut(s) 32, 176, 927
TseI GCWGC 2 cut(s) 290, 907
Tsp45I GTSAC 3 cut(s) 32, 176, 927
TspDTI ATGAA 8 cut(s) 195, 629, 783, 795, 1053, 1065, 1169, 1264
TspRI CASTG 2 cut(s) 332, 600
Van91I CCANNNNNTGG 1 cut(s) 93
VpaK11BI GGWCC 1 cut(s) 61
XapI RAATTY 2 cut(s) 133, 1180
XbaI TCTAGA 3 cut(s) 587, 1174, 1207
XceI RCATGY 3 cut(s) 323, 928, 941
XhoI CTCGAG 1 cut(s) 1106
XmiI GTMKAC 1 cut(s) 390
XmnI GAANNNNTTC 1 cut(s) 1232
XspI CTAG 7 cut(s) 386, 588, 770, 899, 1160, 1175, 1208
Zsp2I ATGCAT 1 cut(s) 212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.