AT5G44940

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000062
Physical Location & Seq
Forward (+)
18149369 .. 18150892
1524 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G44940.1

Sequence Viewer

Length: 1134 bp
ATGGAGGAGTTCGATTATATCAGTGAATTTCCGGATTGTTTGCTAACTCAGATACTCTTAAACCTTCCGACCAAAGATTCTGTTAAGACAAGCGTGTTATCGAAGAGATGGAGAAATCTTTGGTTAAACGTTCCTGGACTTCGATTACGCACCTTTGACTTCCCAGTCTTCCCCTATCCTTATGAAGAAGGCTTCGTAAGGTTTATGGACAGATTTATGGAGTTTAAGTGCAGGTCACGCCTGCAAAAGTTCATGATAACGTATTTCGAACACAATGGTTATCGAGATCGATTAATGGAGTTGATCGGTACACTGGTTGATCGTGGAATTCAACATTTGTATGTTTATATGCATACTTGTAACAGAGTTGATTTCATACGTCAAAACATTTACAAGAGTAAGACATTGGTCTCTTTGAAGCTTTATAACGTAGAGTTAAAGAATCCAGAGTTTGTTGTTTCTCTACCTTGTCTCAAGATCTTGAAACTGGAGAATATTTTTCACGGTGAGGATGGTCCTTTGGTCGTGGAGAAGCTCATCTCAGGATGTCCTGTTCTTGAAGATCTTGAGCTGATTAGGCCTTTTGATGATAATGTTGGCTATGGCAGTCTTACGGCACCAAAGTATTCAAGGAATAGAGATATCATCGGTGATTTTTTAACCGTGATATCGAGTGTAAGACATACGATCATCTGTTACTCGACTTCAAAGATGCTTTATTCTTACTCCAAACAACTGGGACCTATTCCCCAATTCCATAACTTATATCATTTGCAGGCTAGGTTCTCAAGCTCATCGTTACAACTATTGCCAACCTTTCTTGAGAGCTGCCCAGCCTGCCCAAATCTGAAAAACCTAATCATGGAGTTTCCCTTTGAGCCTAAGAATATCGACTTTCACAAAGTGCCTCAGTGTTTAATATCGACTCTCGAGTATGTTCAAATTGAAGAACTGATATTGAAGGAGAAAAGTGGGATTAAACTAGTGGATTACTTTCTTGAGAATTCAGCAGTCTTAAAGAAACTGACTCTAAGTTTCACATATCATTCTAAGAAAAAGCAAGACCCTGAGAGCTACAAGAAGCTTCTTACATCCACAAAGCTTTCTCCCACATGTCAAATTATCATCGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

377

Amino Acids

44.1

Weight (kDa)

8.52

Isoelectric Point (pI)

49.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 7 - 45 3.3e-08 F-box domain
LRR_At5g56370 PF24758 101 - 192 6.5e-06 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 301 - 344 4.2e-13 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 426
AasI GACNNNNNNGTC 1 cut(s) 164
Acc36I ACCTGC 1 cut(s) 222
AccB1I GGYRCC 1 cut(s) 616
AccIII TCCGGA 1 cut(s) 31
AclI AACGTT 1 cut(s) 129
AcsI RAATTY 3 cut(s) 26, 327, 1003
AdeI CACNNNGTG 1 cut(s) 904
AfaI GTAC 1 cut(s) 310
AfiI CCNNNNNNNGG 1 cut(s) 862
AflIII ACRYGT 1 cut(s) 1112
AgsI TTSAA 9 cut(s) 332, 418, 484, 560, 630, 708, 941, 947, 961
AhlI ACTAGT 1 cut(s) 982
AjnI CCWGG 1 cut(s) 133
AloI GAACNNNNNNTCC 2 cut(s) 537, 569
AluBI AGCT 8 cut(s) 421, 535, 571, 792, 828, 1074, 1084, 1102
AluI AGCT 8 cut(s) 421, 535, 571, 792, 828, 1074, 1084, 1102
Alw26I GTCTC 2 cut(s) 415, 476
Ama87I CYCGRG 1 cut(s) 929
Aor13HI TCCGGA 1 cut(s) 31
AoxI GGCC 1 cut(s) 578
ApeKI GCWGC 1 cut(s) 828
ApoI RAATTY 3 cut(s) 26, 327, 1003
AseI ATTAAT 1 cut(s) 293
AspS9I GGNCC 2 cut(s) 515, 740
AsuHPI GGTGA 2 cut(s) 518, 662
AsuII TTCGAA 1 cut(s) 267
AvaI CYCGRG 1 cut(s) 929
AvaII GGWCC 2 cut(s) 515, 740
BaeI ACNNNNGTAYC 2 cut(s) 300, 333
BanI GGYRCC 1 cut(s) 616
BbsI GAAGAC 1 cut(s) 160
BbvI GCAGC 1 cut(s) 815
BccI CCATC 2 cut(s) 102, 506
BceAI ACGGC 1 cut(s) 630
BciT130I CCWGG 1 cut(s) 135
BcoDI GTCTC 2 cut(s) 415, 476
BcuI ACTAGT 1 cut(s) 982
BfaI CTAG 2 cut(s) 780, 983
BfuAI ACCTGC 1 cut(s) 222
BglII AGATCT 2 cut(s) 477, 562
BisI GCNGC 1 cut(s) 829
BlsI GCNGC 1 cut(s) 830
Bme1390I CCNGG 1 cut(s) 135
Bme18I GGWCC 2 cut(s) 515, 740
BmeT110I CYCGRG 1 cut(s) 929
BmgT120I GGNCC 2 cut(s) 515, 740
BmiI GGNNCC 2 cut(s) 618, 741
BmrFI CCNGG 1 cut(s) 135
BmrI ACTGGG 2 cut(s) 158, 746
BmsI GCATC 1 cut(s) 702
BmuI ACTGGG 2 cut(s) 158, 746
BoxI GACNNNNGTC 1 cut(s) 407
BpiI GAAGAC 1 cut(s) 160
BpmI CTGGAG 1 cut(s) 509
Bpu14I TTCGAA 1 cut(s) 267
BpuEI CTTGAG 5 cut(s) 458, 587, 772, 842, 1019
Bsa29I ATCGAT 2 cut(s) 289, 1128
BsaI GGTCTC 1 cut(s) 415
BsaWI WCCGGW 1 cut(s) 31
BsaXI ACNNNNNCTCC 2 cut(s) 212, 242
Bsc4I CCNNNNNNNGG 1 cut(s) 862
Bse1I ACTGG 4 cut(s) 164, 318, 492, 741
BseAI TCCGGA 1 cut(s) 31
BseBI CCWGG 1 cut(s) 135
BseCI ATCGAT 2 cut(s) 289, 1128
BseGI GGATG 3 cut(s) 517, 551, 1091
BseLI CCNNNNNNNGG 1 cut(s) 862
BseMII CTCAG 4 cut(s) 62, 555, 923, 1059
BseNI ACTGG 4 cut(s) 164, 318, 492, 741
BseRI GAGGAG 1 cut(s) 20
BseXI GCAGC 1 cut(s) 815
BseYI CCCAGC 1 cut(s) 832
BsgI GTGCAG 1 cut(s) 250
BshFI GGCC 1 cut(s) 580
BshNI GGYRCC 1 cut(s) 616
BshVI ATCGAT 2 cut(s) 289, 1128
BsiHKCI CYCGRG 1 cut(s) 929
BsiSI CCGG 1 cut(s) 32
BslFI GGGAC 1 cut(s) 753
BslI CCNNNNNNNGG 1 cut(s) 862
BsmAI GTCTC 2 cut(s) 415, 476
BsmFI GGGAC 1 cut(s) 753
BsnI GGCC 1 cut(s) 580
Bso31I GGTCTC 1 cut(s) 415
BsoBI CYCGRG 1 cut(s) 929
Bsp119I TTCGAA 1 cut(s) 267
Bsp13I TCCGGA 1 cut(s) 31
Bsp143I GATC 6 cut(s) 286, 303, 319, 477, 562, 687
BspANI GGCC 1 cut(s) 580
BspCNI CTCAG 4 cut(s) 61, 554, 922, 1060
BspDI ATCGAT 2 cut(s) 289, 1128
BspEI TCCGGA 1 cut(s) 31
BspHI TCATGA 1 cut(s) 252
BspLI GGNNCC 2 cut(s) 618, 741
BspMI ACCTGC 1 cut(s) 222
BspT104I TTCGAA 1 cut(s) 267
BspT107I GGYRCC 1 cut(s) 616
BspTNI GGTCTC 1 cut(s) 415
BsrI ACTGG 4 cut(s) 164, 318, 492, 741
BssMI GATC 6 cut(s) 286, 303, 319, 477, 562, 687
Bst2UI CCWGG 1 cut(s) 135
Bst4CI ACNGT 2 cut(s) 506, 664
Bst6I CTCTTC 1 cut(s) 98
BstBI TTCGAA 1 cut(s) 267
BstC8I GCNNGC 3 cut(s) 242, 777, 838
BstDEI CTNAG 7 cut(s) 48, 541, 882, 909, 1031, 1050, 1068
BstF5I GGATG 3 cut(s) 517, 551, 1091
BstKTI GATC 6 cut(s) 289, 306, 322, 480, 565, 690
BstMAI GTCTC 2 cut(s) 415, 476
BstMBI GATC 6 cut(s) 286, 303, 319, 477, 562, 687
BstMWI GCNNNNNNNGC 3 cut(s) 237, 577, 837
BstNI CCWGG 1 cut(s) 135
BstNSI RCATGY 1 cut(s) 1116
BstPAI GACNNNNGTC 1 cut(s) 407
BstSCI CCNGG 1 cut(s) 133
BstV1I GCAGC 1 cut(s) 815
BstV2I GAAGAC 1 cut(s) 160
BstX2I RGATCY 2 cut(s) 477, 562
BstXI CCANNNNNNTGG 1 cut(s) 736
BstYI RGATCY 2 cut(s) 477, 562
Bsu15I ATCGAT 2 cut(s) 289, 1128
BsuRI GGCC 1 cut(s) 580
BsuTUI ATCGAT 2 cut(s) 289, 1128
BtsCI GGATG 3 cut(s) 517, 551, 1091
BtsIMutI CAGTG 3 cut(s) 28, 311, 917
BveI ACCTGC 1 cut(s) 222
Cac8I GCNNGC 3 cut(s) 242, 777, 838
CciI TCATGA 1 cut(s) 252
Cfr13I GGNCC 2 cut(s) 515, 740
ClaI ATCGAT 2 cut(s) 289, 1128
Csp6I GTAC 1 cut(s) 309
CviAII CATG 3 cut(s) 253, 862, 1113
CviQI GTAC 1 cut(s) 309
DdeI CTNAG 7 cut(s) 48, 541, 882, 909, 1031, 1050, 1068
DpnI GATC 6 cut(s) 288, 305, 321, 479, 564, 689
DpnII GATC 6 cut(s) 286, 303, 319, 477, 562, 687
DraIII CACNNNGTG 1 cut(s) 904
DrdI GACNNNNNNGTC 1 cut(s) 164
DseDI GACNNNNNNGTC 1 cut(s) 164
Eam1104I CTCTTC 1 cut(s) 98
EarI CTCTTC 1 cut(s) 98
Eco147I AGGCCT 1 cut(s) 580
Eco31I GGTCTC 1 cut(s) 415
Eco32I GATATC 2 cut(s) 643, 669
Eco47I GGWCC 2 cut(s) 515, 740
Eco88I CYCGRG 1 cut(s) 929
EcoO109I RGGNCCY 1 cut(s) 740
EcoRI GAATTC 2 cut(s) 327, 1003
EcoRII CCWGG 1 cut(s) 133
EcoRV GATATC 2 cut(s) 643, 669
EcoT22I ATGCAT 1 cut(s) 354
FaeI CATG 3 cut(s) 256, 865, 1116
FaqI GGGAC 1 cut(s) 753
FatI CATG 3 cut(s) 252, 861, 1112
Fnu4HI GCNGC 1 cut(s) 829
FokI GGATG 3 cut(s) 524, 558, 1078
Fsp4HI GCNGC 1 cut(s) 829
FspBI CTAG 2 cut(s) 780, 983
GluI GCNGC 1 cut(s) 829
GsaI CCCAGC 1 cut(s) 836
GsuI CTGGAG 1 cut(s) 509
HaeIII GGCC 1 cut(s) 580
HapII CCGG 1 cut(s) 32
Hin1II CATG 3 cut(s) 256, 865, 1116
HindIII AAGCTT 3 cut(s) 419, 1082, 1100
HinfI GANTC 4 cut(s) 77, 442, 925, 1027
HpaII CCGG 1 cut(s) 32
HphI GGTGA 2 cut(s) 518, 662
Hpy166II GTNNAC 1 cut(s) 311
Hpy188I TCNGA 3 cut(s) 51, 69, 849
Hpy8I GTNNAC 1 cut(s) 311
HpyAV CCTTC 3 cut(s) 74, 182, 955
HpyCH4III ACNGT 2 cut(s) 506, 664
HpyCH4IV ACGT 4 cut(s) 129, 260, 379, 429
HpyCH4V TGCA 4 cut(s) 231, 244, 352, 775
HpyF10VI GCNNNNNNNGC 3 cut(s) 237, 577, 837
HpyF3I CTNAG 7 cut(s) 48, 541, 882, 909, 1031, 1050, 1068
HpySE526I ACGT 4 cut(s) 129, 260, 379, 429
Hsp92II CATG 3 cut(s) 256, 865, 1116
Kpn2I TCCGGA 1 cut(s) 31
Kzo9I GATC 6 cut(s) 286, 303, 319, 477, 562, 687
Lsp1109I GCAGC 1 cut(s) 815
LweI GCATC 1 cut(s) 702
MaeI CTAG 2 cut(s) 780, 983
MaeII ACGT 4 cut(s) 129, 260, 379, 429
MaeIII GTNAC 4 cut(s) 234, 359, 695, 798
MalI GATC 6 cut(s) 288, 305, 321, 479, 564, 689
MboI GATC 6 cut(s) 286, 303, 319, 477, 562, 687
MboII GAAGA 5 cut(s) 115, 160, 197, 572, 959
MflI RGATCY 2 cut(s) 477, 562
MluCI AATT 6 cut(s) 26, 327, 752, 942, 1003, 1119
MlyI GAGTC 2 cut(s) 919, 1021
MmeI TCCRAC 1 cut(s) 92
MnlI CCTC 2 cut(s) 502, 918
Mph1103I ATGCAT 1 cut(s) 354
MroI TCCGGA 1 cut(s) 31
MslI CAYNNNNRTG 1 cut(s) 339
MspI CCGG 1 cut(s) 32
MspR9I CCNGG 1 cut(s) 135
MvaI CCWGG 1 cut(s) 135
MwoI GCNNNNNNNGC 3 cut(s) 237, 577, 837
NdeII GATC 6 cut(s) 286, 303, 319, 477, 562, 687
NlaIII CATG 3 cut(s) 256, 865, 1116
NlaIV GGNNCC 2 cut(s) 618, 741
NmuCI GTSAC 1 cut(s) 234
NsiI ATGCAT 1 cut(s) 354
NspI RCATGY 1 cut(s) 1116
NspV TTCGAA 1 cut(s) 267
PaeR7I CTCGAG 1 cut(s) 929
PagI TCATGA 1 cut(s) 252
PceI AGGCCT 1 cut(s) 580
PciI ACATGT 1 cut(s) 1112
PfeI GAWTC 2 cut(s) 77, 442
PfoI TCCNGGA 1 cut(s) 133
PkrI GCNGC 1 cut(s) 830
PleI GAGTC 2 cut(s) 919, 1021
PpsI GAGTC 2 cut(s) 919, 1021
PpuMI RGGWCCY 1 cut(s) 740
PscI ACATGT 1 cut(s) 1112
PshAI GACNNNNGTC 1 cut(s) 407
PshBI ATTAAT 1 cut(s) 293
PsiI TTATAA 1 cut(s) 426
Psp1406I AACGTT 1 cut(s) 129
Psp5II RGGWCCY 1 cut(s) 740
Psp6I CCWGG 1 cut(s) 133
PspFI CCCAGC 1 cut(s) 832
PspGI CCWGG 1 cut(s) 133
PspN4I GGNNCC 2 cut(s) 618, 741
PspPI GGNCC 2 cut(s) 515, 740
PspPPI RGGWCCY 1 cut(s) 740
PsuI RGATCY 2 cut(s) 477, 562
RsaI GTAC 1 cut(s) 310
RsaNI GTAC 1 cut(s) 309
RseI CAYNNNNRTG 1 cut(s) 339
SatI GCNGC 1 cut(s) 829
Sau3AI GATC 6 cut(s) 286, 303, 319, 477, 562, 687
Sau96I GGNCC 2 cut(s) 515, 740
SchI GAGTC 2 cut(s) 919, 1021
ScrFI CCNGG 1 cut(s) 135
SfaNI GCATC 1 cut(s) 702
Sfr274I CTCGAG 1 cut(s) 929
SfuI TTCGAA 1 cut(s) 267
SinI GGWCC 2 cut(s) 515, 740
SlaI CTCGAG 1 cut(s) 929
SmiMI CAYNNNNRTG 1 cut(s) 339
SmlI CTYRAG 6 cut(s) 473, 566, 787, 821, 929, 998
SmoI CTYRAG 6 cut(s) 473, 566, 787, 821, 929, 998
SpeI ACTAGT 1 cut(s) 982
Sse9I AATT 6 cut(s) 26, 327, 752, 942, 1003, 1119
SseBI AGGCCT 1 cut(s) 580
SspI AATATT 1 cut(s) 496
SspMI CTAG 2 cut(s) 780, 983
StuI AGGCCT 1 cut(s) 580
StyD4I CCNGG 1 cut(s) 133
TaaI ACNGT 2 cut(s) 506, 664
TaiI ACGT 4 cut(s) 132, 263, 382, 432
TasI AATT 6 cut(s) 26, 327, 752, 942, 1003, 1119
TfiI GAWTC 2 cut(s) 77, 442
TscAI CASTG 3 cut(s) 28, 318, 917
TseFI GTSAC 1 cut(s) 234
TseI GCWGC 1 cut(s) 828
Tsp45I GTSAC 1 cut(s) 234
TspDTI ATGAA 3 cut(s) 198, 241, 364
TspRI CASTG 3 cut(s) 28, 318, 917
VpaK11BI GGWCC 2 cut(s) 515, 740
VspI ATTAAT 1 cut(s) 293
XapI RAATTY 3 cut(s) 26, 327, 1003
XceI RCATGY 1 cut(s) 1116
XhoI CTCGAG 1 cut(s) 929
XspI CTAG 2 cut(s) 780, 983
Zsp2I ATGCAT 1 cut(s) 354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.