AT5G53840

domain in FBox and BRCT domain containing plant proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000062
Physical Location & Seq
Reverse (-)
21859148 .. 21860672
1525 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G53840.1

Sequence Viewer

Length: 1335 bp
ATGGTGAAGACAGAAATTTGTGGCAAAGGGTCGAGTCAAGGATCAGAGGAAGAGAGGCTAAGCCAATTACCTGATCATTTGATATGTGTCATTCTGTCTCATCTTTCTACCAAGGATGCTGTAAGAACAAGCATCTTATCCACAAGATGGAGAAATCTTTGGCAATTGGTTCCTGTATTGGATTTCGACTCCCGAGAGTTACGGTCGTTCAGTGAGTTTGTGAGTTTTGCTGGCAGTTTTTTTTATTTACACAAAGACTCATATATACAGAAACTACGTGTATGTATTTATGATCTTGCTGGTAACTATTATCTCACCTCATGGATAGATCTTGTGACTAGGCATAGGATTCAGCATATTGATATTAGTGTTTTTACCTGTTCTGGCTTCGGTGTCATACCACTAAGCTTGTATACTTGTGATACACTCGTACACTTAAAACTCTCTCGAGTCACCATGGTTAACGTCGAGTTTGTTTCCTTGCCTTGCCTGAAGATTCTGGACTTAGATTTTGTTAATTTTACCAATGAGACCACGTTGGATAAAATTATCTCATGCTCCCCAGTTCTAGAAGAGTTAACCATTGTCAAATCTTCTGAAGATAATGTAAAGATTATACAAGTACGCTCTCAGACACTAAAGAGAGTCGAAATACATCGGCGGTTTGATCGACATAATGGACTTGTTATCGATACTCCTCTACTCCAGTTTTTGAGTATTAAAGCTCACTCAATAAAGAGCATTGAATTCATCAATCTAGGTTTCACTACCAAGGTAGATATTGACGTCAACTTGCTTGATCCAAACGACTTATCCAATAGAAGCATGACGCGTGATTTCTTCACCACTATTTCAAGGGTCAGGTCTCTAGTCATTAGACATGGTACTATCAAGGACATCTTTCATTACATGGAATTAGAACCTTTGCAACAATTTTGTTACCTGTCCGAATTGAGTGCTGTTTGTTCTATTTCTAATCTGGAAATGCTGCTAAATCTTCTTAAGAGCTGCCCGAAACTAGAATCTCTCAGCTTGAAATTGGTTGACTATGAAAAGAATAAAAAAGAAGAGGTGATGTCTTCGACAGTACCACCACCGTGTTTGGTATCGTCGCTCAAGTTTGTTAAATTGGAAAGTCAGCTCTTGGGATGTGGAACAGAACTGAAAGTAGCTAGGTACTTCTTGGAGAATTCAACAATTCTGGAGAAATTGACTCTAAAGATTGATTATATGTATAAGGATGAGGCAAATGTAAACCACATTCGCCAGACACTCCATGCAGTACCAAGATGCTCTAGTACTTGTGAAGTTGTTATACATTCTCTACTTTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

444

Amino Acids

50.91

Weight (kDa)

6.91

Isoelectric Point (pI)

46.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 20 - 58 1.6e-09 F-box domain
LRR_At5g56370 PF24758 105 - 240 8.2e-15 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 363 - 406 7.4e-13 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 789
AccB7I CCANNNNNTGG 1 cut(s) 147
AccI GTMKAC 1 cut(s) 413
AccII CGCG 1 cut(s) 832
AciI CCGC 1 cut(s) 661
AclWI GGATC 2 cut(s) 49, 794
AcsI RAATTY 3 cut(s) 15, 746, 1189
AcuI CTGAAG 2 cut(s) 512, 618
AcyI GRCGYC 1 cut(s) 786
AfaI GTAC 7 cut(s) 432, 624, 886, 1089, 1178, 1284, 1300
AfiI CCNNNNNNNGG 1 cut(s) 147
AflII CTTAAG 1 cut(s) 1001
AflIII ACRYGT 2 cut(s) 277, 830
AgsI TTSAA 4 cut(s) 746, 855, 1036, 1194
AleI CACNNNNGTG 1 cut(s) 1096
AluBI AGCT 6 cut(s) 408, 725, 1008, 1032, 1141, 1172
AluI AGCT 6 cut(s) 408, 725, 1008, 1032, 1141, 1172
Alw26I GTCTC 3 cut(s) 102, 524, 870
AlwI GGATC 2 cut(s) 49, 794
Ama87I CYCGRG 2 cut(s) 192, 447
ApeKI GCWGC 2 cut(s) 988, 1008
ApoI RAATTY 3 cut(s) 15, 746, 1189
ArsI GACNNNNNNTTYG 2 cut(s) 494, 526
AsuHPI GGTGA 5 cut(s) 16, 307, 445, 835, 1084
AvaI CYCGRG 2 cut(s) 192, 447
BaeI ACNNNNGTAYC 2 cut(s) 414, 447
BarI GAAGNNNNNNTAC 2 cut(s) 1299, 1331
BbsI GAAGAC 2 cut(s) 14, 1071
BbvI GCAGC 2 cut(s) 975, 995
BccI CCATC 1 cut(s) 141
BcgI CGANNNNNNTGC 2 cut(s) 938, 972
BclI TGATCA 1 cut(s) 73
BcoDI GTCTC 3 cut(s) 102, 524, 870
BfaI CTAG 7 cut(s) 339, 569, 758, 869, 1019, 1173, 1296
BfrI CTTAAG 1 cut(s) 1001
BglII AGATCT 1 cut(s) 328
BisI GCNGC 2 cut(s) 989, 1009
BlpI GCTNAGC 1 cut(s) 59
BlsI GCNGC 2 cut(s) 990, 1010
BmcAI AGTACT 1 cut(s) 1300
BmeT110I CYCGRG 2 cut(s) 192, 447
BmiI GGNNCC 1 cut(s) 171
BmrI ACTGGG 1 cut(s) 557
BmsI GCATC 3 cut(s) 106, 141, 1280
BmuI ACTGGG 1 cut(s) 557
BpiI GAAGAC 2 cut(s) 14, 1071
BpmI CTGGAG 2 cut(s) 689, 1223
Bpu1102I GCTNAGC 1 cut(s) 59
BpuEI CTTGAG 1 cut(s) 1100
Bsa29I ATCGAT 1 cut(s) 690
BsaAI YACGTR 1 cut(s) 278
BsaHI GRCGYC 1 cut(s) 786
BsaI GGTCTC 2 cut(s) 524, 870
BsaJI CCNNGG 3 cut(s) 111, 456, 771
Bsc4I CCNNNNNNNGG 1 cut(s) 147
Bse1I ACTGG 2 cut(s) 563, 706
BseCI ATCGAT 1 cut(s) 690
BseDI CCNNGG 3 cut(s) 111, 456, 771
BseGI GGATG 3 cut(s) 121, 1154, 1246
BseLI CCNNNNNNNGG 1 cut(s) 147
BseMII CTCAG 2 cut(s) 644, 1042
BseNI ACTGG 2 cut(s) 563, 706
BseRI GAGGAG 1 cut(s) 687
BseXI GCAGC 2 cut(s) 975, 995
Bsh1236I CGCG 1 cut(s) 832
Bsh1285I CGRYCG 1 cut(s) 206
BshVI ATCGAT 1 cut(s) 690
BsiEI CGRYCG 1 cut(s) 206
BsiHKCI CYCGRG 2 cut(s) 192, 447
BslI CCNNNNNNNGG 1 cut(s) 147
BsmAI GTCTC 3 cut(s) 102, 524, 870
Bso31I GGTCTC 2 cut(s) 524, 870
BsoBI CYCGRG 2 cut(s) 192, 447
Bsp143I GATC 6 cut(s) 41, 73, 292, 328, 667, 799
Bsp1720I GCTNAGC 1 cut(s) 59
Bsp19I CCATGG 1 cut(s) 456
BspACI CCGC 1 cut(s) 661
BspCNI CTCAG 2 cut(s) 643, 1041
BspDI ATCGAT 1 cut(s) 690
BspFNI CGCG 1 cut(s) 832
BspLI GGNNCC 1 cut(s) 171
BspPI GGATC 2 cut(s) 49, 794
BspTI CTTAAG 1 cut(s) 1001
BspTNI GGTCTC 2 cut(s) 524, 870
BsrI ACTGG 2 cut(s) 563, 706
BssECI CCNNGG 3 cut(s) 111, 456, 771
BssMI GATC 6 cut(s) 41, 73, 292, 328, 667, 799
BssNAI GTATAC 1 cut(s) 414
BssNI GRCGYC 1 cut(s) 786
BssT1I CCWWGG 3 cut(s) 111, 456, 771
Bst1107I GTATAC 1 cut(s) 414
Bst4CI ACNGT 3 cut(s) 204, 1087, 1098
Bst6I CTCTTC 3 cut(s) 45, 567, 1062
BstACI GRCGYC 1 cut(s) 786
BstAFI CTTAAG 1 cut(s) 1001
BstBAI YACGTR 1 cut(s) 278
BstC8I GCNNGC 1 cut(s) 232
BstDEI CTNAG 5 cut(s) 59, 404, 505, 630, 1028
BstDSI CCRYGG 1 cut(s) 456
BstF5I GGATG 3 cut(s) 121, 1154, 1246
BstFNI CGCG 1 cut(s) 832
BstKTI GATC 6 cut(s) 44, 76, 295, 331, 670, 802
BstMAI GTCTC 3 cut(s) 102, 524, 870
BstMBI GATC 6 cut(s) 41, 73, 292, 328, 667, 799
BstMCI CGRYCG 1 cut(s) 206
BstUI CGCG 1 cut(s) 832
BstV1I GCAGC 2 cut(s) 975, 995
BstV2I GAAGAC 2 cut(s) 14, 1071
BstX2I RGATCY 1 cut(s) 328
BstYI RGATCY 1 cut(s) 328
BstZ17I GTATAC 1 cut(s) 414
Bsu15I ATCGAT 1 cut(s) 690
BsuTUI ATCGAT 1 cut(s) 690
BtgI CCRYGG 1 cut(s) 456
BtsCI GGATG 3 cut(s) 121, 1154, 1246
BtsIMutI CAGTG 1 cut(s) 217
Cac8I GCNNGC 1 cut(s) 232
ClaI ATCGAT 1 cut(s) 690
CseI GACGC 1 cut(s) 838
Csp6I GTAC 7 cut(s) 431, 623, 885, 1088, 1177, 1283, 1299
CspCI CAANNNNNGTGG 4 cut(s) 390, 425, 1083, 1118
CviAII CATG 7 cut(s) 321, 457, 555, 826, 881, 910, 1277
CviJI RGCY 9 cut(s) 58, 63, 387, 408, 725, 1008, 1032, 1141, 1172
CviKI_1 RGCY 9 cut(s) 58, 63, 387, 408, 725, 1008, 1032, 1141, 1172
CviQI GTAC 7 cut(s) 431, 623, 885, 1088, 1177, 1283, 1299
DdeI CTNAG 5 cut(s) 59, 404, 505, 630, 1028
DpnI GATC 6 cut(s) 43, 75, 294, 330, 669, 801
DpnII GATC 6 cut(s) 41, 73, 292, 328, 667, 799
Eam1104I CTCTTC 3 cut(s) 45, 567, 1062
EarI CTCTTC 3 cut(s) 45, 567, 1062
Eco130I CCWWGG 3 cut(s) 111, 456, 771
Eco31I GGTCTC 2 cut(s) 524, 870
Eco57I CTGAAG 2 cut(s) 512, 618
Eco88I CYCGRG 2 cut(s) 192, 447
EcoRI GAATTC 2 cut(s) 746, 1189
EcoT14I CCWWGG 3 cut(s) 111, 456, 771
ErhI CCWWGG 3 cut(s) 111, 456, 771
FaeI CATG 7 cut(s) 324, 460, 558, 829, 884, 913, 1280
FalI AAGNNNNNCTT 2 cut(s) 884, 916
FatI CATG 7 cut(s) 320, 456, 554, 825, 880, 909, 1276
FbaI TGATCA 1 cut(s) 73
FblI GTMKAC 1 cut(s) 413
Fnu4HI GCNGC 2 cut(s) 989, 1009
FokI GGATG 3 cut(s) 128, 1161, 1253
Fsp4HI GCNGC 2 cut(s) 989, 1009
FspBI CTAG 7 cut(s) 339, 569, 758, 869, 1019, 1173, 1296
GluI GCNGC 2 cut(s) 989, 1009
GsuI CTGGAG 2 cut(s) 689, 1223
HgaI GACGC 1 cut(s) 838
Hin1I GRCGYC 1 cut(s) 786
Hin1II CATG 7 cut(s) 324, 460, 558, 829, 884, 913, 1280
HincII GTYRAC 4 cut(s) 463, 579, 790, 1045
HindII GTYRAC 4 cut(s) 463, 579, 790, 1045
HindIII AAGCTT 1 cut(s) 406
HinfI GANTC 9 cut(s) 34, 188, 257, 349, 450, 496, 645, 1022, 1213
HpaI GTTAAC 2 cut(s) 463, 579
HphI GGTGA 5 cut(s) 16, 307, 445, 835, 1084
Hpy166II GTNNAC 7 cut(s) 414, 433, 463, 579, 790, 1045, 1255
Hpy188I TCNGA 4 cut(s) 46, 598, 633, 949
Hpy188III TCNNGA 6 cut(s) 192, 447, 500, 569, 980, 1202
Hpy8I GTNNAC 7 cut(s) 414, 433, 463, 579, 790, 1045, 1255
Hpy99I CGWCG 2 cut(s) 470, 1114
HpyCH4III ACNGT 3 cut(s) 204, 1087, 1098
HpyCH4IV ACGT 4 cut(s) 277, 465, 536, 786
HpyCH4V TGCA 2 cut(s) 928, 1280
HpyF3I CTNAG 5 cut(s) 59, 404, 505, 630, 1028
HpySE526I ACGT 4 cut(s) 277, 465, 536, 786
Hsp92I GRCGYC 1 cut(s) 786
Hsp92II CATG 7 cut(s) 324, 460, 558, 829, 884, 913, 1280
Ksp22I TGATCA 1 cut(s) 73
KspAI GTTAAC 2 cut(s) 463, 579
Kzo9I GATC 6 cut(s) 41, 73, 292, 328, 667, 799
LmnI GCTCC 1 cut(s) 563
Lsp1109I GCAGC 2 cut(s) 975, 995
LweI GCATC 3 cut(s) 106, 141, 1280
MaeI CTAG 7 cut(s) 339, 569, 758, 869, 1019, 1173, 1296
MaeII ACGT 4 cut(s) 277, 465, 536, 786
MaeIII GTNAC 5 cut(s) 198, 302, 334, 451, 938
MalI GATC 6 cut(s) 43, 75, 294, 330, 669, 801
MboI GATC 6 cut(s) 41, 73, 292, 328, 667, 799
MfeI CAATTG 1 cut(s) 164
MflI RGATCY 1 cut(s) 328
MluI ACGCGT 1 cut(s) 830
MlyI GAGTC 6 cut(s) 43, 182, 251, 459, 654, 1207
MmeI TCCRAC 1 cut(s) 519
MnlI CCTC 6 cut(s) 40, 48, 328, 708, 1063, 1237
MseI TTAA 7 cut(s) 437, 462, 516, 578, 720, 1002, 1125
MslI CAYNNNNRTG 1 cut(s) 1096
MspCI CTTAAG 1 cut(s) 1001
MunI CAATTG 1 cut(s) 164
MvnI CGCG 1 cut(s) 832
NcoI CCATGG 1 cut(s) 456
NdeII GATC 6 cut(s) 41, 73, 292, 328, 667, 799
NlaIII CATG 7 cut(s) 324, 460, 558, 829, 884, 913, 1280
NlaIV GGNNCC 1 cut(s) 171
NmuCI GTSAC 2 cut(s) 334, 451
OliI CACNNNNGTG 1 cut(s) 1096
PaeR7I CTCGAG 1 cut(s) 447
PfeI GAWTC 3 cut(s) 349, 496, 1022
PflMI CCANNNNNTGG 1 cut(s) 147
PkrI GCNGC 2 cut(s) 990, 1010
PleI GAGTC 6 cut(s) 42, 182, 251, 458, 653, 1207
PpsI GAGTC 6 cut(s) 42, 182, 251, 458, 653, 1207
Ppu21I YACGTR 1 cut(s) 278
PspN4I GGNNCC 1 cut(s) 171
PsuI RGATCY 1 cut(s) 328
RsaI GTAC 7 cut(s) 432, 624, 886, 1089, 1178, 1284, 1300
RsaNI GTAC 7 cut(s) 431, 623, 885, 1088, 1177, 1283, 1299
RseI CAYNNNNRTG 1 cut(s) 1096
SaqAI TTAA 7 cut(s) 437, 462, 516, 578, 720, 1002, 1125
SatI GCNGC 2 cut(s) 989, 1009
Sau3AI GATC 6 cut(s) 41, 73, 292, 328, 667, 799
ScaI AGTACT 1 cut(s) 1300
SchI GAGTC 6 cut(s) 43, 182, 251, 459, 654, 1207
SfaNI GCATC 3 cut(s) 106, 141, 1280
Sfr274I CTCGAG 1 cut(s) 447
SlaI CTCGAG 1 cut(s) 447
SmiMI CAYNNNNRTG 1 cut(s) 1096
SmlI CTYRAG 3 cut(s) 447, 1001, 1115
SmoI CTYRAG 3 cut(s) 447, 1001, 1115
SsiI CCGC 1 cut(s) 661
SspMI CTAG 7 cut(s) 339, 569, 758, 869, 1019, 1173, 1296
StyI CCWWGG 3 cut(s) 111, 456, 771
TaaI ACNGT 3 cut(s) 204, 1087, 1098
TaiI ACGT 4 cut(s) 280, 468, 539, 789
TaqI TCGA 8 cut(s) 32, 186, 448, 468, 648, 670, 690, 1082
TatI WGTACW 1 cut(s) 1298
TfiI GAWTC 3 cut(s) 349, 496, 1022
Tru1I TTAA 7 cut(s) 437, 462, 516, 578, 720, 1002, 1125
Tru9I TTAA 7 cut(s) 437, 462, 516, 578, 720, 1002, 1125
TscAI CASTG 1 cut(s) 217
TseFI GTSAC 2 cut(s) 334, 451
TseI GCWGC 2 cut(s) 988, 1008
Tsp45I GTSAC 2 cut(s) 334, 451
TspDTI ATGAA 3 cut(s) 739, 893, 1065
TspRI CASTG 1 cut(s) 217
Van91I CCANNNNNTGG 1 cut(s) 147
Vha464I CTTAAG 1 cut(s) 1001
XapI RAATTY 3 cut(s) 15, 746, 1189
XbaI TCTAGA 1 cut(s) 568
XhoI CTCGAG 1 cut(s) 447
XmiI GTMKAC 1 cut(s) 413
XspI CTAG 7 cut(s) 339, 569, 758, 869, 1019, 1173, 1296
ZraI GACGTC 1 cut(s) 787
ZrmI AGTACT 1 cut(s) 1300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.