RchiOBHm_Chr4g0417401

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000062
Physical Location & Seq
Reverse (-)
42614047 .. 42615510
1464 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38749

Sequence Viewer

Length: 1464 bp
ATGGATTCGAAATCAAAACGTCCAGAAGGAGCTGAAGATAGGATCAGCCAATTACAGGACGATATTCTTGTGCATATACTATCCTATATTCCGACGGTCTATTCTGTTCGAACCATGGTTTTGTCTAAAAGATGGAACAACTTATGGACCTTCGTCCCCAGCCTACACTTCGACCAACTAGATAATCGCATAGGACATTATCGAACTTGGTATACTTTTGATGATTTTGCGAAGTTTGTTGATGGTGCACTCTCGTTACACAACTCGTCGACAATCAGAAAATTTCGTCTTCATATTGGACGCATTCAGCTTATTCGAGAGGAAGGTGTTTCTCGCATTCGTGACTGGATATGCACTGCCATGAGGCATGAGGTCTGTGAATTTGATCTTTATTTTTGCCCTAATTATCAGTTGAGAGAGAAGATAGAGTTGAATCTGCCTCAAAGAGTTTTCTTGTGCAAAACTCTGGAGGTTTTGAAGGTACATTCAAATTGTATCAACTATCCTCCTACTAAACCAGGTTACTTTCCAAGCCTCAAGTTCGCCAAAGTTACCGCAGAACATGGAGATAATTCCTCAATGGGAGAACTTTTTTGTAACTGCCCTGTACTTGAAGAGTTGTCTATCGATGCCCATCTTATGAAAAAAGATGTCAAAATCTGGATCTCTGCACCTGAATTGAAAACTTTAAGGACTAGAATTCTTGTAAATGATGATGAACGAAAGGTGAAAGGGATTTCTATCAATGCTCCAAAGCTTGAAAACCTTTTTGTCTACACTGATTTGACAAGATATATCTTGCGGAATGCAAAATCCCTCGTCAAAGCCAACATAGAACTCACAGATTTCGAAGAAAATTTGAGTCCAGAGCTTTTGAACCGTGCAACTGCTTTACTTGCAGGAGTTTCCAGTGTTGAATATTTGCATATATCAGGTCCTAATTATGTGGCATGTTCACTGCCTAATTTCTGTAATTTGAAGCAATTGAAGCTCATTCTTTTTGGGTGCTCTTATTTGGAATATGTAATGGAGTTGCTCAAGCGATCACCTAAGCTTGAAGATCTTGTCTTAGATATTGATGTCCGCTCATGGTATCGTGAAGAATATGTCGAAGGATACGAGCCCTTCAAGCCACCAGAGATTGTGCCTATTTGTGTGGTGTCCCACCTTAAGACTGTTTCCATTACTCACATCACGGGACATGATGATCAGTTAGGTGTGGTAAAGTATTTGTTAAAGTATGGTCAAGTTCTGAGGAATATGACTATATTCACCTGTGGTGCTCTTCTTTTTAAGACTAGTCATATCACAGAAGAGAAGTTCCAGAGGAAAATTTTGAAGTATCACAAGAGTTCAAACACTTGTGAGGTTGAAGTTAAGTTTGAAAATAAGGGGGTAGTTTCAAAATATTGTTTCCCCTGTGGAAGCAGCAACCTCCACCTAGATCAAAGATATCGAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

487

Amino Acids

56.55

Weight (kDa)

8.56

Isoelectric Point (pI)

42.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 53 8.2e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 84 - 426 8e-12 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 114 - 263 1.6e-08 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 379 - 423 8.6e-10 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1086
AccI GTMKAC 3 cut(s) 212, 269, 774
AciI CCGC 3 cut(s) 555, 802, 1084
AclWI GGATC 2 cut(s) 50, 671
AcsI RAATTY 5 cut(s) 281, 380, 699, 856, 1332
AcuI CTGAAG 1 cut(s) 54
AfaI GTAC 2 cut(s) 483, 609
AfiI CCNNNNNNNGG 1 cut(s) 55
AflII CTTAAG 1 cut(s) 1169
AhlI ACTAGT 1 cut(s) 1298
AjnI CCWGG 1 cut(s) 517
AluBI AGCT 6 cut(s) 32, 310, 757, 871, 991, 1054
AluI AGCT 6 cut(s) 32, 310, 757, 871, 991, 1054
Alw21I GWGCWC 3 cut(s) 250, 1010, 1285
Alw44I GTGCAC 1 cut(s) 246
AlwI GGATC 2 cut(s) 50, 671
ApaLI GTGCAC 1 cut(s) 246
ApeKI GCWGC 1 cut(s) 1428
ApoI RAATTY 5 cut(s) 281, 380, 699, 856, 1332
AspS9I GGNCC 2 cut(s) 147, 935
AsuHPI GGTGA 3 cut(s) 739, 1038, 1264
AsuII TTCGAA 3 cut(s) 8, 109, 849
AvaII GGWCC 2 cut(s) 147, 935
BaeGI GKGCMC 1 cut(s) 250
BanII GRGCYC 1 cut(s) 1125
BbsI GAAGAC 1 cut(s) 281
Bbv12I GWGCWC 3 cut(s) 250, 1010, 1285
BbvI GCAGC 1 cut(s) 1440
BccI CCATC 3 cut(s) 126, 236, 642
BciT130I CCWGG 1 cut(s) 519
BciVI GTATCC 1 cut(s) 1109
BclI TGATCA 1 cut(s) 1207
BcuI ACTAGT 1 cut(s) 1298
BfaI CTAG 4 cut(s) 179, 696, 1299, 1442
BfrI CTTAAG 1 cut(s) 1169
BfuI GTATCC 1 cut(s) 1109
BglII AGATCT 1 cut(s) 1060
BisI GCNGC 1 cut(s) 1429
BlsI GCNGC 1 cut(s) 1430
Bme1390I CCNGG 1 cut(s) 519
Bme18I GGWCC 2 cut(s) 147, 935
BmgT120I GGNCC 2 cut(s) 147, 935
BmrFI CCNGG 1 cut(s) 519
BmsI GCATC 1 cut(s) 619
BoxI GACNNNNGTC 1 cut(s) 152
BpiI GAAGAC 1 cut(s) 281
BpmI CTGGAG 1 cut(s) 488
Bpu10I CCTNAGC 1 cut(s) 1050
Bpu14I TTCGAA 3 cut(s) 8, 109, 849
BpuEI CTTGAG 2 cut(s) 521, 1022
Bsa29I ATCGAT 1 cut(s) 627
BsaBI GATNNNNATC 2 cut(s) 633, 740
BsaJI CCNNGG 1 cut(s) 114
Bsc4I CCNNNNNNNGG 1 cut(s) 55
Bse1I ACTGG 2 cut(s) 350, 909
Bse8I GATNNNNATC 2 cut(s) 633, 740
BseBI CCWGG 1 cut(s) 519
BseCI ATCGAT 1 cut(s) 627
BseDI CCNNGG 1 cut(s) 114
BseJI GATNNNNATC 2 cut(s) 633, 740
BseLI CCNNNNNNNGG 1 cut(s) 55
BseMII CTCAG 1 cut(s) 1244
BseNI ACTGG 2 cut(s) 350, 909
BseSI GKGCMC 1 cut(s) 250
BseXI GCAGC 1 cut(s) 1440
BseYI CCCAGC 1 cut(s) 158
BsgI GTGCAG 1 cut(s) 654
BshVI ATCGAT 1 cut(s) 627
BsiHKAI GWGCWC 3 cut(s) 250, 1010, 1285
BslFI GGGAC 3 cut(s) 140, 1147, 1212
BslI CCNNNNNNNGG 1 cut(s) 55
BsmFI GGGAC 3 cut(s) 140, 1147, 1212
BsmI GAATGC 3 cut(s) 303, 336, 811
Bsp119I TTCGAA 3 cut(s) 8, 109, 849
Bsp1286I GDGCHC 4 cut(s) 250, 1010, 1125, 1285
Bsp143I GATC 7 cut(s) 42, 385, 663, 1043, 1060, 1207, 1444
Bsp19I CCATGG 1 cut(s) 114
BspACI CCGC 3 cut(s) 555, 802, 1084
BspCNI CTCAG 1 cut(s) 1245
BspDI ATCGAT 1 cut(s) 627
BspPI GGATC 2 cut(s) 50, 671
BspQI GCTCTTC 1 cut(s) 1290
BspT104I TTCGAA 3 cut(s) 8, 109, 849
BspTI CTTAAG 1 cut(s) 1169
BsrBI CCGCTC 1 cut(s) 1086
BsrI ACTGG 2 cut(s) 350, 909
BssECI CCNNGG 1 cut(s) 114
BssMI GATC 7 cut(s) 42, 385, 663, 1043, 1060, 1207, 1444
BssNAI GTATAC 1 cut(s) 213
BssT1I CCWWGG 1 cut(s) 114
Bst1107I GTATAC 1 cut(s) 213
Bst2UI CCWGG 1 cut(s) 519
Bst4CI ACNGT 3 cut(s) 97, 881, 1177
Bst6I CTCTTC 3 cut(s) 609, 1290, 1308
BstAFI CTTAAG 1 cut(s) 1169
BstBI TTCGAA 3 cut(s) 8, 109, 849
BstDEI CTNAG 3 cut(s) 1050, 1069, 1253
BstDSI CCRYGG 1 cut(s) 114
BstKTI GATC 7 cut(s) 45, 388, 666, 1046, 1063, 1210, 1447
BstMBI GATC 7 cut(s) 42, 385, 663, 1043, 1060, 1207, 1444
BstMWI GCNNNNNNNGC 3 cut(s) 896, 988, 1129
BstNI CCWGG 1 cut(s) 519
BstNSI RCATGY 1 cut(s) 954
BstPAI GACNNNNGTC 1 cut(s) 152
BstSCI CCNGG 1 cut(s) 517
BstSLI GKGCMC 1 cut(s) 250
BstV1I GCAGC 1 cut(s) 1440
BstV2I GAAGAC 1 cut(s) 281
BstX2I RGATCY 2 cut(s) 663, 1060
BstYI RGATCY 2 cut(s) 663, 1060
BstZ17I GTATAC 1 cut(s) 213
Bsu15I ATCGAT 1 cut(s) 627
BsuI GTATCC 1 cut(s) 1109
BsuTUI ATCGAT 1 cut(s) 627
BtgI CCRYGG 1 cut(s) 114
BtsI GCAGTG 2 cut(s) 354, 956
BtsIMutI CAGTG 4 cut(s) 354, 777, 916, 956
Cfr13I GGNCC 2 cut(s) 147, 935
ClaI ATCGAT 1 cut(s) 627
CseI GACGC 1 cut(s) 309
CsiI ACCWGGT 1 cut(s) 517
Csp6I GTAC 2 cut(s) 482, 608
CviAII CATG 7 cut(s) 115, 361, 368, 563, 951, 1089, 1202
CviQI GTAC 2 cut(s) 482, 608
DdeI CTNAG 3 cut(s) 1050, 1069, 1253
DpnI GATC 7 cut(s) 44, 387, 665, 1045, 1062, 1209, 1446
DpnII GATC 7 cut(s) 42, 385, 663, 1043, 1060, 1207, 1444
Eam1104I CTCTTC 3 cut(s) 609, 1290, 1308
EarI CTCTTC 3 cut(s) 609, 1290, 1308
Eco130I CCWWGG 1 cut(s) 114
Eco24I GRGCYC 1 cut(s) 1125
Eco32I GATATC 1 cut(s) 1454
Eco47I GGWCC 2 cut(s) 147, 935
Eco57I CTGAAG 1 cut(s) 54
EcoO109I RGGNCCY 1 cut(s) 935
EcoRI GAATTC 1 cut(s) 699
EcoRII CCWGG 1 cut(s) 517
EcoRV GATATC 1 cut(s) 1454
EcoT14I CCWWGG 1 cut(s) 114
EcoT38I GRGCYC 1 cut(s) 1125
ErhI CCWWGG 1 cut(s) 114
FaeI CATG 7 cut(s) 118, 364, 371, 566, 954, 1092, 1205
FaqI GGGAC 3 cut(s) 140, 1147, 1212
FatI CATG 7 cut(s) 114, 360, 367, 562, 950, 1088, 1201
FbaI TGATCA 1 cut(s) 1207
FblI GTMKAC 3 cut(s) 212, 269, 774
Fnu4HI GCNGC 1 cut(s) 1429
FriOI GRGCYC 1 cut(s) 1125
Fsp4HI GCNGC 1 cut(s) 1429
FspBI CTAG 4 cut(s) 179, 696, 1299, 1442
GluI GCNGC 1 cut(s) 1429
GsaI CCCAGC 1 cut(s) 162
GsuI CTGGAG 1 cut(s) 488
HgaI GACGC 1 cut(s) 309
Hin1II CATG 7 cut(s) 118, 364, 371, 566, 954, 1092, 1205
HincII GTYRAC 1 cut(s) 270
HindII GTYRAC 1 cut(s) 270
HindIII AAGCTT 2 cut(s) 755, 1052
HinfI GANTC 3 cut(s) 5, 433, 862
HphI GGTGA 3 cut(s) 739, 1038, 1264
Hpy166II GTNNAC 5 cut(s) 213, 248, 270, 775, 956
Hpy188I TCNGA 3 cut(s) 93, 278, 1254
Hpy188III TCNNGA 8 cut(s) 23, 317, 341, 467, 661, 866, 1097, 1324
Hpy8I GTNNAC 5 cut(s) 213, 248, 270, 775, 956
Hpy99I CGWCG 2 cut(s) 97, 271
HpyAV CCTTC 6 cut(s) 20, 160, 317, 472, 1106, 1135
HpyCH4III ACNGT 3 cut(s) 97, 881, 1177
HpyCH4IV ACGT 1 cut(s) 19
HpyCH4V TGCA 9 cut(s) 73, 248, 354, 459, 671, 809, 884, 899, 925
HpyF10VI GCNNNNNNNGC 3 cut(s) 896, 988, 1129
HpyF3I CTNAG 3 cut(s) 1050, 1069, 1253
HpySE526I ACGT 1 cut(s) 19
Hsp92II CATG 7 cut(s) 118, 364, 371, 566, 954, 1092, 1205
Ksp22I TGATCA 1 cut(s) 1207
Kzo9I GATC 7 cut(s) 42, 385, 663, 1043, 1060, 1207, 1444
LguI GCTCTTC 1 cut(s) 1290
LmnI GCTCC 2 cut(s) 29, 754
Lsp1109I GCAGC 1 cut(s) 1440
LweI GCATC 1 cut(s) 619
MabI ACCWGGT 1 cut(s) 517
MaeI CTAG 4 cut(s) 179, 696, 1299, 1442
MaeII ACGT 1 cut(s) 19
MaeIII GTNAC 5 cut(s) 255, 341, 521, 550, 596
MalI GATC 7 cut(s) 44, 387, 665, 1045, 1062, 1209, 1446
MbiI CCGCTC 1 cut(s) 1086
MboI GATC 7 cut(s) 42, 385, 663, 1043, 1060, 1207, 1444
MboII GAAGA 9 cut(s) 47, 281, 433, 626, 863, 1070, 1112, 1277, 1325
MfeI CAATTG 1 cut(s) 983
MflI RGATCY 2 cut(s) 663, 1060
MhlI GDGCHC 4 cut(s) 250, 1010, 1125, 1285
MlyI GAGTC 1 cut(s) 871
MmeI TCCRAC 1 cut(s) 116
MseI TTAA 5 cut(s) 689, 1170, 1235, 1293, 1377
MslI CAYNNNNRTG 1 cut(s) 359
MspCI CTTAAG 1 cut(s) 1169
MspR9I CCNGG 1 cut(s) 519
MunI CAATTG 1 cut(s) 983
Mva1269I GAATGC 3 cut(s) 303, 336, 811
MvaI CCWGG 1 cut(s) 519
MwoI GCNNNNNNNGC 3 cut(s) 896, 988, 1129
NcoI CCATGG 1 cut(s) 114
NdeII GATC 7 cut(s) 42, 385, 663, 1043, 1060, 1207, 1444
NlaIII CATG 7 cut(s) 118, 364, 371, 566, 954, 1092, 1205
NmuCI GTSAC 1 cut(s) 341
NspI RCATGY 1 cut(s) 954
NspV TTCGAA 3 cut(s) 8, 109, 849
PciSI GCTCTTC 1 cut(s) 1290
PcsI WCGNNNNNNNCGW 1 cut(s) 1116
PctI GAATGC 3 cut(s) 303, 336, 811
PfeI GAWTC 2 cut(s) 5, 433
PkrI GCNGC 1 cut(s) 1430
PleI GAGTC 1 cut(s) 870
PpsI GAGTC 1 cut(s) 870
PpuMI RGGWCCY 1 cut(s) 935
PshAI GACNNNNGTC 1 cut(s) 152
Psp5II RGGWCCY 1 cut(s) 935
Psp6I CCWGG 1 cut(s) 517
PspFI CCCAGC 1 cut(s) 158
PspGI CCWGG 1 cut(s) 517
PspPI GGNCC 2 cut(s) 147, 935
PspPPI RGGWCCY 1 cut(s) 935
PsrI GAACNNNNNNTAC 2 cut(s) 196, 228
PsuI RGATCY 2 cut(s) 663, 1060
RsaI GTAC 2 cut(s) 483, 609
RsaNI GTAC 2 cut(s) 482, 608
RseI CAYNNNNRTG 1 cut(s) 359
SalI GTCGAC 1 cut(s) 268
SapI GCTCTTC 1 cut(s) 1290
SaqAI TTAA 5 cut(s) 689, 1170, 1235, 1293, 1377
SatI GCNGC 1 cut(s) 1429
Sau3AI GATC 7 cut(s) 42, 385, 663, 1043, 1060, 1207, 1444
Sau96I GGNCC 2 cut(s) 147, 935
SchI GAGTC 1 cut(s) 871
ScrFI CCNGG 1 cut(s) 519
SduI GDGCHC 4 cut(s) 250, 1010, 1125, 1285
SexAI ACCWGGT 1 cut(s) 517
SfaNI GCATC 1 cut(s) 619
SfuI TTCGAA 3 cut(s) 8, 109, 849
SinI GGWCC 2 cut(s) 147, 935
SmiMI CAYNNNNRTG 1 cut(s) 359
SmlI CTYRAG 3 cut(s) 536, 1037, 1169
SmoI CTYRAG 3 cut(s) 536, 1037, 1169
SpeI ACTAGT 1 cut(s) 1298
SsiI CCGC 3 cut(s) 555, 802, 1084
SspI AATATT 2 cut(s) 920, 1409
SspMI CTAG 4 cut(s) 179, 696, 1299, 1442
StyD4I CCNGG 1 cut(s) 517
StyI CCWWGG 1 cut(s) 114
TaaI ACNGT 3 cut(s) 97, 881, 1177
TaiI ACGT 1 cut(s) 22
TatI WGTACW 1 cut(s) 607
TfiI GAWTC 2 cut(s) 5, 433
Tru1I TTAA 5 cut(s) 689, 1170, 1235, 1293, 1377
Tru9I TTAA 5 cut(s) 689, 1170, 1235, 1293, 1377
TscAI CASTG 4 cut(s) 361, 784, 916, 963
TseFI GTSAC 1 cut(s) 341
TseI GCWGC 1 cut(s) 1428
Tsp45I GTSAC 1 cut(s) 341
TspDTI ATGAA 3 cut(s) 281, 656, 732
TspRI CASTG 4 cut(s) 361, 784, 916, 963
Vha464I CTTAAG 1 cut(s) 1169
VneI GTGCAC 1 cut(s) 246
VpaK11BI GGWCC 2 cut(s) 147, 935
XapI RAATTY 5 cut(s) 281, 380, 699, 856, 1332
XceI RCATGY 1 cut(s) 954
XmiI GTMKAC 3 cut(s) 212, 269, 774
XspI CTAG 4 cut(s) 179, 696, 1299, 1442
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.