Rmu_sc0001575.1_g000008

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001575.1
OG0000062
Physical Location & Seq
Forward (+)
47375 .. 49483
2109 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001575.1_g000008.1.cds

Sequence Viewer

Length: 1308 bp
atgaattcgaaatcaaagcgtcagttgagtgttccggataggatcagtgggttaccagatgcacttctttggcacatactttcgtttgttgaaacacaagatgctgtgaggacctgtgttctgtctacaagatggaagaacatatgggcgtctgttcccaccttagattttgaccagacaagttttcatgaccctgataaattttgggcgtttgttgattatgtacttctattccgtcactcatcgaacataaaaaaatttcggctttatatgaagggcaaggatgtggaccactctcgtattaatgcttggatcaacactgccattaggcgcaacgttgttgaacttgatctcttagctgggcatccatttctatccaagcttgttgagttgcctaaaagcctcttcatgtgtaaaacactggtaatcttgaggttgagatcacaatttattaccaatattcctgcatcagggtgcttcccgagcctgaagttcctccatgttacattttattcatatgttattgaatcaatgcgtgagcttttctccaactgtccgatacttgaagatttgactgtggatggtcttcttctatacggtgtttccttgaatttaaacatttctgtccctgcactgaagacgttaagaatatggtttgataaagatggtgatgataatggtgccagcagctattttattaattgcccaaagcttgaaaatcttgatgtgatagaggagttttcgtcaacatattgttgggggaaagcaaaatccctagtcaaagccagtatttgtctatctcagcattgttcaaatcgacagcctagtttttaccgtgtgaaatcacttttggcaggaatatccagtgttacagatttatgtctttcagctcattgttttgaggtcggcggttgtcctcaagaagactctgataatgacgaagggtcagtgtatgaagaagactccgagagtgaagagggctctgagcatgaagagggttcagagaatgaacgaaggtcagatcatgaagaaggctcagtgaatgaacaagggtcagagcatcaatggaatcctccagattgtgtgcctaaatgttgtttgttacacctcaagattgtctccataaggggattcatgggagaacgtgatgagttggaagtggcaaagtacttgctgaagtatggtcaagttttgaataagatgactatatctatggatcatcttgatgttaatgaaaaagagaagatttacaaggagtttttaatggttccaaggggttcaagaactagtatagttgaatttatctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

435

Amino Acids

49.63

Weight (kDa)

5.53

Isoelectric Point (pI)

46.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 680
AccI GTMKAC 1 cut(s) 125
AccIII TCCGGA 1 cut(s) 34
AciI CCGC 1 cut(s) 909
AclI AACGTT 1 cut(s) 336
AclWI GGATC 3 cut(s) 50, 320, 1224
AcsI RAATTY 5 cut(s) 4, 200, 257, 610, 1298
AcuI CTGAAG 3 cut(s) 509, 656, 1196
AcyI GRCGYC 1 cut(s) 149
AfaI GTAC 2 cut(s) 225, 1169
AfiI CCNNNNNNNGG 1 cut(s) 470
AhdI GACNNNNNGTC 1 cut(s) 943
AhlI ACTAGT 1 cut(s) 1286
AjuI GAANNNNNNNTTGG 2 cut(s) 833, 865
AluBI AGCT 6 cut(s) 359, 382, 541, 690, 712, 890
AluI AGCT 6 cut(s) 359, 382, 541, 690, 712, 890
Alw26I GTCTC 1 cut(s) 1123
AlwI GGATC 3 cut(s) 50, 320, 1224
Ama87I CYCGRG 1 cut(s) 481
Aor13HI TCCGGA 1 cut(s) 34
ApeKI GCWGC 1 cut(s) 687
ApoI RAATTY 5 cut(s) 4, 200, 257, 610, 1298
AseI ATTAAT 2 cut(s) 303, 699
AspLEI GCGC 1 cut(s) 333
AspS9I GGNCC 2 cut(s) 111, 289
AsuHPI GGTGA 1 cut(s) 680
AsuII TTCGAA 1 cut(s) 8
AvaI CYCGRG 1 cut(s) 481
AvaII GGWCC 2 cut(s) 111, 289
BanI GGYRCC 1 cut(s) 680
BanII GRGCYC 1 cut(s) 983
BbsI GAAGAC 4 cut(s) 578, 644, 930, 966
BbvI GCAGC 1 cut(s) 699
BccI CCATC 3 cut(s) 126, 575, 659
BcoDI GTCTC 1 cut(s) 1123
BcuI ACTAGT 1 cut(s) 1286
BfaI CTAG 4 cut(s) 776, 825, 1287, 1306
BisI GCNGC 1 cut(s) 688
BlsI GCNGC 1 cut(s) 689
BmcAI AGTACT 1 cut(s) 1169
Bme18I GGWCC 2 cut(s) 111, 289
BmeRI GACNNNNNGTC 1 cut(s) 943
BmeT110I CYCGRG 1 cut(s) 481
BmgT120I GGNCC 2 cut(s) 111, 289
BmiI GGNNCC 2 cut(s) 682, 1269
BmsI GCATC 5 cut(s) 49, 91, 373, 476, 1069
BpiI GAAGAC 4 cut(s) 578, 644, 930, 966
BplI GAGNNNNNCTC 2 cut(s) 530, 562
BpmI CTGGAG 1 cut(s) 1059
Bpu14I TTCGAA 1 cut(s) 8
BpuEI CTTGAG 3 cut(s) 451, 903, 1094
BsaHI GRCGYC 1 cut(s) 149
BsaJI CCNNGG 1 cut(s) 1271
BsaWI WCCGGW 1 cut(s) 34
BsaXI ACNNNNNCTCC 2 cut(s) 728, 758
Bsc4I CCNNNNNNNGG 1 cut(s) 470
Bse1I ACTGG 3 cut(s) 426, 786, 864
BseAI TCCGGA 1 cut(s) 34
BseDI CCNNGG 1 cut(s) 1271
BseGI GGATG 3 cut(s) 289, 364, 586
BseLI CCNNNNNNNGG 1 cut(s) 470
BseMII CTCAG 3 cut(s) 815, 975, 1050
BseNI ACTGG 3 cut(s) 426, 786, 864
BseRI GAGGAG 1 cut(s) 749
BseXI GCAGC 1 cut(s) 699
BseYI CCCAGC 1 cut(s) 359
BsgI GTGCAG 1 cut(s) 615
BshNI GGYRCC 1 cut(s) 680
BsiHKCI CYCGRG 1 cut(s) 481
BsiSI CCGG 1 cut(s) 35
BslFI GGGAC 1 cut(s) 611
BslI CCNNNNNNNGG 1 cut(s) 470
BsmAI GTCTC 1 cut(s) 1123
BsmFI GGGAC 1 cut(s) 611
BsoBI CYCGRG 1 cut(s) 481
Bsp119I TTCGAA 1 cut(s) 8
Bsp1286I GDGCHC 1 cut(s) 983
Bsp13I TCCGGA 1 cut(s) 34
Bsp143I GATC 6 cut(s) 42, 312, 349, 440, 1021, 1216
BspACI CCGC 1 cut(s) 909
BspCNI CTCAG 3 cut(s) 814, 976, 1049
BspEI TCCGGA 1 cut(s) 34
BspHI TCATGA 2 cut(s) 187, 1024
BspLI GGNNCC 2 cut(s) 682, 1269
BspPI GGATC 3 cut(s) 50, 320, 1224
BspT104I TTCGAA 1 cut(s) 8
BspT107I GGYRCC 1 cut(s) 680
BsrI ACTGG 3 cut(s) 426, 786, 864
BssECI CCNNGG 1 cut(s) 1271
BssMI GATC 6 cut(s) 42, 312, 349, 440, 1021, 1216
BssNI GRCGYC 1 cut(s) 149
BssT1I CCWWGG 1 cut(s) 1271
Bst4CI ACNGT 4 cut(s) 554, 577, 599, 836
Bst6I CTCTTC 3 cut(s) 410, 969, 987
BstACI GRCGYC 1 cut(s) 149
BstBI TTCGAA 1 cut(s) 8
BstC8I GCNNGC 1 cut(s) 685
BstDEI CTNAG 5 cut(s) 163, 355, 801, 984, 1036
BstEII GGTNACC 1 cut(s) 51
BstENI CCTNNNNNAGG 1 cut(s) 468
BstF5I GGATG 3 cut(s) 289, 364, 586
BstHHI GCGC 1 cut(s) 333
BstKTI GATC 6 cut(s) 45, 315, 352, 443, 1024, 1219
BstMAI GTCTC 1 cut(s) 1123
BstMBI GATC 6 cut(s) 42, 312, 349, 440, 1021, 1216
BstMWI GCNNNNNNNGC 1 cut(s) 483
BstPI GGTNACC 1 cut(s) 51
BstV1I GCAGC 1 cut(s) 699
BstV2I GAAGAC 4 cut(s) 578, 644, 930, 966
BtsCI GGATG 3 cut(s) 289, 364, 586
BtsI GCAGTG 1 cut(s) 318
BtsIMutI CAGTG 7 cut(s) 52, 318, 419, 632, 871, 954, 1044
Cac8I GCNNGC 1 cut(s) 685
CciI TCATGA 2 cut(s) 187, 1024
CfoI GCGC 1 cut(s) 333
Cfr13I GGNCC 2 cut(s) 111, 289
CseI GACGC 2 cut(s) 8, 138
Csp6I GTAC 2 cut(s) 224, 1168
CviAII CATG 6 cut(s) 188, 409, 500, 989, 1025, 1135
CviQI GTAC 2 cut(s) 224, 1168
DdeI CTNAG 5 cut(s) 163, 355, 801, 984, 1036
DpnI GATC 6 cut(s) 44, 314, 351, 442, 1023, 1218
DpnII GATC 6 cut(s) 42, 312, 349, 440, 1021, 1216
DraI TTTAAA 1 cut(s) 615
DriI GACNNNNNGTC 1 cut(s) 943
Eam1104I CTCTTC 3 cut(s) 410, 969, 987
Eam1105I GACNNNNNGTC 1 cut(s) 943
EarI CTCTTC 3 cut(s) 410, 969, 987
Eco130I CCWWGG 1 cut(s) 1271
Eco24I GRGCYC 1 cut(s) 983
Eco47I GGWCC 2 cut(s) 111, 289
Eco57I CTGAAG 3 cut(s) 509, 656, 1196
Eco88I CYCGRG 1 cut(s) 481
Eco91I GGTNACC 1 cut(s) 51
EcoNI CCTNNNNNAGG 1 cut(s) 468
EcoO109I RGGNCCY 1 cut(s) 111
EcoO65I GGTNACC 1 cut(s) 51
EcoRI GAATTC 1 cut(s) 4
EcoT14I CCWWGG 1 cut(s) 1271
EcoT38I GRGCYC 1 cut(s) 983
ErhI CCWWGG 1 cut(s) 1271
FaeI CATG 6 cut(s) 191, 412, 503, 992, 1028, 1138
FaqI GGGAC 1 cut(s) 611
FatI CATG 6 cut(s) 187, 408, 499, 988, 1024, 1134
FauNDI CATATG 2 cut(s) 143, 517
FblI GTMKAC 1 cut(s) 125
Fnu4HI GCNGC 1 cut(s) 688
FokI GGATG 3 cut(s) 296, 351, 593
FriOI GRGCYC 1 cut(s) 983
Fsp4HI GCNGC 1 cut(s) 688
FspBI CTAG 4 cut(s) 776, 825, 1287, 1306
GlaI GCGC 1 cut(s) 332
GluI GCNGC 1 cut(s) 688
GsaI CCCAGC 1 cut(s) 363
GsuI CTGGAG 1 cut(s) 1059
HapII CCGG 1 cut(s) 35
HgaI GACGC 2 cut(s) 8, 138
HhaI GCGC 1 cut(s) 333
Hin1I GRCGYC 1 cut(s) 149
Hin1II CATG 6 cut(s) 191, 412, 503, 992, 1028, 1138
Hin6I GCGC 1 cut(s) 331
HinP1I GCGC 1 cut(s) 331
HincII GTYRAC 1 cut(s) 747
HindII GTYRAC 1 cut(s) 747
HindIII AAGCTT 2 cut(s) 380, 710
HinfI GANTC 5 cut(s) 527, 926, 962, 1069, 1131
HpaII CCGG 1 cut(s) 35
HphI GGTGA 1 cut(s) 680
Hpy166II GTNNAC 3 cut(s) 126, 289, 747
Hpy188I TCNGA 7 cut(s) 558, 931, 967, 985, 1003, 1021, 1057
Hpy8I GTNNAC 3 cut(s) 126, 289, 747
HpyAV CCTTC 4 cut(s) 268, 935, 1008, 1025
HpyCH4III ACNGT 4 cut(s) 554, 577, 599, 836
HpyCH4IV ACGT 3 cut(s) 336, 641, 1144
HpyCH4V TGCA 3 cut(s) 62, 467, 632
HpyF10VI GCNNNNNNNGC 1 cut(s) 483
HpyF3I CTNAG 5 cut(s) 163, 355, 801, 984, 1036
HpySE526I ACGT 3 cut(s) 336, 641, 1144
Hsp92I GRCGYC 1 cut(s) 149
Hsp92II CATG 6 cut(s) 191, 412, 503, 992, 1028, 1138
HspAI GCGC 1 cut(s) 331
Kpn2I TCCGGA 1 cut(s) 34
Kzo9I GATC 6 cut(s) 42, 312, 349, 440, 1021, 1216
Lsp1109I GCAGC 1 cut(s) 699
LweI GCATC 5 cut(s) 49, 91, 373, 476, 1069
MaeI CTAG 4 cut(s) 776, 825, 1287, 1306
MaeII ACGT 3 cut(s) 336, 641, 1144
MaeIII GTNAC 5 cut(s) 51, 236, 502, 868, 1101
MalI GATC 6 cut(s) 44, 314, 351, 442, 1023, 1218
MboI GATC 6 cut(s) 42, 312, 349, 440, 1021, 1216
MhlI GDGCHC 1 cut(s) 983
MluCI AATT 7 cut(s) 4, 200, 257, 446, 610, 700, 1298
MlyI GAGTC 2 cut(s) 920, 956
MmeI TCCRAC 2 cut(s) 573, 1134
MroI TCCGGA 1 cut(s) 34
MseI TTAA 6 cut(s) 303, 614, 644, 699, 1230, 1262
MslI CAYNNNNRTG 2 cut(s) 472, 1224
MspI CCGG 1 cut(s) 35
MwoI GCNNNNNNNGC 1 cut(s) 483
NdeI CATATG 2 cut(s) 143, 517
NdeII GATC 6 cut(s) 42, 312, 349, 440, 1021, 1216
NlaIII CATG 6 cut(s) 191, 412, 503, 992, 1028, 1138
NlaIV GGNNCC 2 cut(s) 682, 1269
NmuCI GTSAC 1 cut(s) 236
NspV TTCGAA 1 cut(s) 8
PagI TCATGA 2 cut(s) 187, 1024
PfeI GAWTC 3 cut(s) 527, 1069, 1131
PkrI GCNGC 1 cut(s) 689
PleI GAGTC 2 cut(s) 920, 956
PpsI GAGTC 2 cut(s) 920, 956
PpuMI RGGWCCY 1 cut(s) 111
PshBI ATTAAT 2 cut(s) 303, 699
Psp1406I AACGTT 1 cut(s) 336
Psp5II RGGWCCY 1 cut(s) 111
PspEI GGTNACC 1 cut(s) 51
PspFI CCCAGC 1 cut(s) 359
PspN4I GGNNCC 2 cut(s) 682, 1269
PspPI GGNCC 2 cut(s) 111, 289
PspPPI RGGWCCY 1 cut(s) 111
RsaI GTAC 2 cut(s) 225, 1169
RsaNI GTAC 2 cut(s) 224, 1168
RseI CAYNNNNRTG 2 cut(s) 472, 1224
SaqAI TTAA 6 cut(s) 303, 614, 644, 699, 1230, 1262
SatI GCNGC 1 cut(s) 688
Sau3AI GATC 6 cut(s) 42, 312, 349, 440, 1021, 1216
Sau96I GGNCC 2 cut(s) 111, 289
ScaI AGTACT 1 cut(s) 1169
SchI GAGTC 2 cut(s) 920, 956
SduI GDGCHC 1 cut(s) 983
SfaNI GCATC 5 cut(s) 49, 91, 373, 476, 1069
SfuI TTCGAA 1 cut(s) 8
SinI GGWCC 2 cut(s) 111, 289
SmiMI CAYNNNNRTG 2 cut(s) 472, 1224
SmlI CTYRAG 3 cut(s) 430, 918, 1109
SmoI CTYRAG 3 cut(s) 430, 918, 1109
SpeI ACTAGT 1 cut(s) 1286
Sse9I AATT 7 cut(s) 4, 200, 257, 446, 610, 700, 1298
SsiI CCGC 1 cut(s) 909
SspI AATATT 1 cut(s) 460
SspMI CTAG 4 cut(s) 776, 825, 1287, 1306
StyI CCWWGG 1 cut(s) 1271
TaaI ACNGT 4 cut(s) 554, 577, 599, 836
TaiI ACGT 3 cut(s) 339, 644, 1147
TaqI TCGA 3 cut(s) 8, 245, 817
TasI AATT 7 cut(s) 4, 200, 257, 446, 610, 700, 1298
TatI WGTACW 2 cut(s) 223, 1167
TfiI GAWTC 3 cut(s) 527, 1069, 1131
Tru1I TTAA 6 cut(s) 303, 614, 644, 699, 1230, 1262
Tru9I TTAA 6 cut(s) 303, 614, 644, 699, 1230, 1262
TscAI CASTG 7 cut(s) 52, 325, 426, 639, 871, 954, 1044
TseFI GTSAC 1 cut(s) 236
TseI GCWGC 1 cut(s) 687
Tsp45I GTSAC 1 cut(s) 236
TspGWI ACGGA 1 cut(s) 224
TspRI CASTG 7 cut(s) 52, 325, 426, 639, 871, 954, 1044
VpaK11BI GGWCC 2 cut(s) 111, 289
VspI ATTAAT 2 cut(s) 303, 699
XagI CCTNNNNNAGG 1 cut(s) 468
XapI RAATTY 5 cut(s) 4, 200, 257, 610, 1298
XmiI GTMKAC 1 cut(s) 125
XspI CTAG 4 cut(s) 776, 825, 1287, 1306
ZrmI AGTACT 1 cut(s) 1169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.