AT1G16930

F-box FBD LRR-repeat protein At1g16930-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000062
Physical Location & Seq
Forward (+)
5789679 .. 5791752
2074 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G16930.3

Sequence Viewer

Length: 1350 bp
ATGGATGATGAAACCTCTGTTAAAGAGAAGCAAAGGAACTCCGATAGGATAAGCAATTTACCTGATTCCTTGTTATGTCAGATTCTCTCAGATCTCTCCACAAAAGAATCGGTTTGCACAAGCGTTTTATCAAAACGATGGAGAAATCTCTGGTTACATGTTCCTGTATTGGATTTGGATTCCAATAACTTCCCAGATGATGATGTTTTTGTGAGTTTCGTAAATAGGTTTCTGGGTTCTGAAAATGAGCAACACTTGGAGAGATTCAAGTTGATCTATGAGGTTAATGAGCACGATGCTTCTCGTTTCAAGTCTTGGATCAATGCTGTGATTAAGCGTAGAGTTTGTCATTTTAATGTTCATAATGAGGTGGATGATGATGACGAGTTAGTTAAGATGCCTTTATCTCTCTATTCATGTGAAAGATTGGTGAACTTACAGCTCTACCGCGTAGCCTTGGATCATCCGGAATCTGTTTCGCTGCCTTGTGTCAAGATTATGCATCTTGATATGGTCAAGTACGATGCTGATTCGACTCTGGAGATTCTAATATCAGGTTGTCCAGTTTTGGAAGAGTTAACCATAGTTCGTGATCCCAATGATTCTCTTGAAGTTGTGTGTGTGCGTTCCCAGTCTTTAAAAAGCTTCAAGATAGATTCTGAGCGCTACGAAAGTCAAAATCATGTTGTTACAATCGATGCTCCAAGACTTGAGTATATGAATCTTTGTGATCATCGATCTGACAGCTTCATAATACACAACATTGGCCCCTTTGCAAAGGTAGATATCGATGTTATCTTTAATGTCGAATATAATGATCCATTGGAACCAGATGATTCTTCCAAGATAGCTATGCTAGGTAAATTCCTCACTGGGTTATCTACGGTCAGCGAAATGGTCATATCTTCTGATACTCTACAGGTTATTCATGATTACTGCAAAATGGAACAACTACCTCAATTCTCTAACTTGTCTCGCTTGCATGCTTACTTCGAAGATACTTGGTGGGAAATGTTGCCAACCTTCCTTGAGAGCTTCCCAAATCTACACTCACTCGTCATGGAATTTGATTGCTTTCCAGACACAGAGCAGATTGATCTTTCATATGTGCCACAATGTTTCCTATCATCTCTTGAGTTTGTTCATTTGAAGACTCCATACGTTGTTAACATGCAAAAGGAAGGGAGACCGCTCACAGGAACATCAAGTAAGAGGAAATTAGCAAAGTACTTTCTAGAGAATGGTGCAGCTCTCAAGAAACTGACAGTAAGTGCGAGTTTCTGTAACATCATCGACGAAATCAAAGCGATTCCAAGAAGCTCTACGAGTTGTCAAGTTGTCATGGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

449

Amino Acids

51.65

Weight (kDa)

4.91

Isoelectric Point (pI)

45.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 17 - 55 1.6e-07 F-box domain
LRR_At5g56370 PF24758 104 - 244 1.4e-14 FBD-associated F-box protein At5g56370, LRR repeats
LRR_2 PF07723 163 - 188 1.4e-07 Leucine Rich Repeat
FBD PF08387 368 - 422 1.3e-12 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1192
AccII CGCG 1 cut(s) 450
AccIII TCCGGA 1 cut(s) 466
AciI CCGC 2 cut(s) 448, 1190
AclWI GGATC 4 cut(s) 326, 468, 587, 812
AcsI RAATTY 2 cut(s) 863, 1064
AfaI GTAC 2 cut(s) 521, 1229
AfeI AGCGCT 1 cut(s) 665
AfiI CCNNNNNNNGG 1 cut(s) 1196
AflIII ACRYGT 1 cut(s) 157
AgsI TTSAA 5 cut(s) 268, 310, 611, 649, 1150
AluBI AGCT 7 cut(s) 442, 645, 747, 851, 1035, 1250, 1320
AluI AGCT 7 cut(s) 442, 645, 747, 851, 1035, 1250, 1320
Alw21I GWGCWC 1 cut(s) 294
Alw26I GTCTC 2 cut(s) 978, 1180
AlwI GGATC 4 cut(s) 326, 468, 587, 812
Aor13HI TCCGGA 1 cut(s) 466
Aor51HI AGCGCT 1 cut(s) 665
AoxI GGCC 1 cut(s) 766
ApeKI GCWGC 2 cut(s) 481, 1247
ApoI RAATTY 2 cut(s) 863, 1064
AspLEI GCGC 1 cut(s) 666
AspS9I GGNCC 1 cut(s) 767
AsuHPI GGTGA 1 cut(s) 442
AsuII TTCGAA 1 cut(s) 993
BarI GAAGNNNNNNTAC 2 cut(s) 1142, 1174
BbsI GAAGAC 1 cut(s) 1157
Bbv12I GWGCWC 1 cut(s) 294
BbvI GCAGC 2 cut(s) 468, 1259
BccI CCATC 1 cut(s) 132
BclI TGATCA 1 cut(s) 730
BcoDI GTCTC 2 cut(s) 978, 1180
BfaI CTAG 2 cut(s) 857, 1235
BfmI CTRYAG 1 cut(s) 917
BfoI RGCGCY 1 cut(s) 667
BglII AGATCT 1 cut(s) 91
BisI GCNGC 2 cut(s) 482, 1248
BlsI GCNGC 2 cut(s) 483, 1249
BmcAI AGTACT 1 cut(s) 1229
BmgT120I GGNCC 1 cut(s) 767
BmiI GGNNCC 2 cut(s) 769, 828
BmrI ACTGGG 2 cut(s) 625, 882
BmsI GCATC 5 cut(s) 286, 387, 511, 514, 688
BmuI ACTGGG 2 cut(s) 625, 882
BpiI GAAGAC 1 cut(s) 1157
BpmI CTGGAG 1 cut(s) 560
Bpu14I TTCGAA 1 cut(s) 993
BpuEI CTTGAG 4 cut(s) 731, 1049, 1154, 1238
Bsa29I ATCGAT 3 cut(s) 696, 736, 789
BsaI GGTCTC 1 cut(s) 1180
BsaJI CCNNGG 1 cut(s) 456
BsaWI WCCGGW 1 cut(s) 466
Bsc4I CCNNNNNNNGG 1 cut(s) 1196
Bse1I ACTGG 3 cut(s) 563, 631, 877
BseAI TCCGGA 1 cut(s) 466
BseCI ATCGAT 3 cut(s) 696, 736, 789
BseDI CCNNGG 1 cut(s) 456
BseGI GGATG 3 cut(s) 10, 379, 463
BseLI CCNNNNNNNGG 1 cut(s) 1196
BseMII CTCAG 2 cut(s) 102, 651
BseNI ACTGG 3 cut(s) 563, 631, 877
BseXI GCAGC 2 cut(s) 468, 1259
BsgI GTGCAG 1 cut(s) 1266
Bsh1236I CGCG 1 cut(s) 450
BshFI GGCC 1 cut(s) 768
BshVI ATCGAT 3 cut(s) 696, 736, 789
BsiHKAI GWGCWC 1 cut(s) 294
BsiSI CCGG 1 cut(s) 467
BslI CCNNNNNNNGG 1 cut(s) 1196
BsmAI GTCTC 2 cut(s) 978, 1180
BsnI GGCC 1 cut(s) 768
Bso31I GGTCTC 1 cut(s) 1180
Bsp119I TTCGAA 1 cut(s) 993
Bsp1286I GDGCHC 1 cut(s) 294
Bsp13I TCCGGA 1 cut(s) 466
Bsp143I GATC 9 cut(s) 91, 273, 318, 460, 592, 730, 737, 817, 1096
BspACI CCGC 2 cut(s) 448, 1190
BspANI GGCC 1 cut(s) 768
BspCNI CTCAG 2 cut(s) 101, 652
BspDI ATCGAT 3 cut(s) 696, 736, 789
BspEI TCCGGA 1 cut(s) 466
BspFNI CGCG 1 cut(s) 450
BspHI TCATGA 1 cut(s) 928
BspLI GGNNCC 2 cut(s) 769, 828
BspPI GGATC 4 cut(s) 326, 468, 587, 812
BspT104I TTCGAA 1 cut(s) 993
BspTNI GGTCTC 1 cut(s) 1180
BsrBI CCGCTC 1 cut(s) 1192
BsrI ACTGG 3 cut(s) 563, 631, 877
BssECI CCNNGG 1 cut(s) 456
BssMI GATC 9 cut(s) 91, 273, 318, 460, 592, 730, 737, 817, 1096
BssT1I CCWWGG 1 cut(s) 456
Bst4CI ACNGT 2 cut(s) 886, 1267
Bst6I CTCTTC 1 cut(s) 567
BstBI TTCGAA 1 cut(s) 993
BstC8I GCNNGC 2 cut(s) 980, 984
BstDEI CTNAG 2 cut(s) 88, 660
BstF5I GGATG 3 cut(s) 10, 379, 463
BstFNI CGCG 1 cut(s) 450
BstH2I RGCGCY 1 cut(s) 667
BstHHI GCGC 1 cut(s) 666
BstKTI GATC 9 cut(s) 94, 276, 321, 463, 595, 733, 740, 820, 1099
BstMAI GTCTC 2 cut(s) 978, 1180
BstMBI GATC 9 cut(s) 91, 273, 318, 460, 592, 730, 737, 817, 1096
BstNSI RCATGY 3 cut(s) 161, 986, 1174
BstSFI CTRYAG 1 cut(s) 917
BstUI CGCG 1 cut(s) 450
BstV1I GCAGC 2 cut(s) 468, 1259
BstV2I GAAGAC 1 cut(s) 1157
BstX2I RGATCY 1 cut(s) 91
BstYI RGATCY 1 cut(s) 91
Bsu15I ATCGAT 3 cut(s) 696, 736, 789
BsuRI GGCC 1 cut(s) 768
BsuTUI ATCGAT 3 cut(s) 696, 736, 789
BtsCI GGATG 3 cut(s) 10, 379, 463
BtsIMutI CAGTG 1 cut(s) 870
Cac8I GCNNGC 2 cut(s) 980, 984
CciI TCATGA 1 cut(s) 928
CfoI GCGC 1 cut(s) 666
Cfr13I GGNCC 1 cut(s) 767
ClaI ATCGAT 3 cut(s) 696, 736, 789
Csp6I GTAC 2 cut(s) 520, 1228
CviAII CATG 8 cut(s) 158, 417, 683, 929, 983, 1060, 1171, 1342
CviJI RGCY 9 cut(s) 442, 455, 645, 747, 768, 851, 1035, 1250, 1320
CviKI_1 RGCY 9 cut(s) 442, 455, 645, 747, 768, 851, 1035, 1250, 1320
CviQI GTAC 2 cut(s) 520, 1228
DdeI CTNAG 2 cut(s) 88, 660
DpnI GATC 9 cut(s) 93, 275, 320, 462, 594, 732, 739, 819, 1098
DpnII GATC 9 cut(s) 91, 273, 318, 460, 592, 730, 737, 817, 1096
DraI TTTAAA 1 cut(s) 639
Eam1104I CTCTTC 1 cut(s) 567
EarI CTCTTC 1 cut(s) 567
Eco130I CCWWGG 1 cut(s) 456
Eco31I GGTCTC 1 cut(s) 1180
Eco32I GATATC 1 cut(s) 787
Eco47III AGCGCT 1 cut(s) 665
EcoRV GATATC 1 cut(s) 787
EcoT14I CCWWGG 1 cut(s) 456
EcoT22I ATGCAT 1 cut(s) 504
ErhI CCWWGG 1 cut(s) 456
FaeI CATG 8 cut(s) 161, 420, 686, 932, 986, 1063, 1174, 1345
FatI CATG 8 cut(s) 157, 416, 682, 928, 982, 1059, 1170, 1341
FauNDI CATATG 1 cut(s) 1105
FbaI TGATCA 1 cut(s) 730
Fnu4HI GCNGC 2 cut(s) 482, 1248
FokI GGATG 3 cut(s) 17, 386, 450
Fsp4HI GCNGC 2 cut(s) 482, 1248
FspBI CTAG 2 cut(s) 857, 1235
GlaI GCGC 1 cut(s) 665
GluI GCNGC 2 cut(s) 482, 1248
GsuI CTGGAG 1 cut(s) 560
HaeII RGCGCY 1 cut(s) 667
HaeIII GGCC 1 cut(s) 768
HapII CCGG 1 cut(s) 467
HhaI GCGC 1 cut(s) 666
Hin1II CATG 8 cut(s) 161, 420, 686, 932, 986, 1063, 1174, 1345
Hin6I GCGC 1 cut(s) 664
HinP1I GCGC 1 cut(s) 664
HincII GTYRAC 2 cut(s) 579, 1168
HindII GTYRAC 2 cut(s) 579, 1168
HindIII AAGCTT 1 cut(s) 643
HpaI GTTAAC 2 cut(s) 579, 1168
HpaII CCGG 1 cut(s) 467
HphI GGTGA 1 cut(s) 442
Hpy166II GTNNAC 3 cut(s) 433, 579, 1168
Hpy188I TCNGA 7 cut(s) 43, 81, 91, 241, 661, 742, 910
Hpy8I GTNNAC 3 cut(s) 433, 579, 1168
Hpy99I CGWCG 1 cut(s) 1298
HpyAV CCTTC 2 cut(s) 1033, 1175
HpyCH4III ACNGT 2 cut(s) 886, 1267
HpyCH4IV ACGT 1 cut(s) 1161
HpyCH4V TGCA 7 cut(s) 117, 502, 776, 939, 982, 1174, 1247
HpyF3I CTNAG 2 cut(s) 88, 660
HpySE526I ACGT 1 cut(s) 1161
Hsp92II CATG 8 cut(s) 161, 420, 686, 932, 986, 1063, 1174, 1345
HspAI GCGC 1 cut(s) 664
Kpn2I TCCGGA 1 cut(s) 466
Ksp22I TGATCA 1 cut(s) 730
KspAI GTTAAC 2 cut(s) 579, 1168
Kzo9I GATC 9 cut(s) 91, 273, 318, 460, 592, 730, 737, 817, 1096
LmnI GCTCC 1 cut(s) 706
Lsp1109I GCAGC 2 cut(s) 468, 1259
LweI GCATC 5 cut(s) 286, 387, 511, 514, 688
MaeI CTAG 2 cut(s) 857, 1235
MaeII ACGT 1 cut(s) 1161
MaeIII GTNAC 3 cut(s) 153, 688, 1283
MalI GATC 9 cut(s) 93, 275, 320, 462, 594, 732, 739, 819, 1098
MbiI CCGCTC 1 cut(s) 1192
MboI GATC 9 cut(s) 91, 273, 318, 460, 592, 730, 737, 817, 1096
MboII GAAGA 5 cut(s) 584, 831, 897, 1007, 1162
MflI RGATCY 1 cut(s) 91
MhlI GDGCHC 1 cut(s) 294
MluCI AATT 5 cut(s) 55, 863, 959, 1064, 1217
MlyI GAGTC 2 cut(s) 529, 1147
MnlI CCTC 6 cut(s) 25, 274, 361, 878, 966, 1206
Mph1103I ATGCAT 1 cut(s) 504
MroI TCCGGA 1 cut(s) 466
MslI CAYNNNNRTG 1 cut(s) 354
MspI CCGG 1 cut(s) 467
MvnI CGCG 1 cut(s) 450
NdeI CATATG 1 cut(s) 1105
NdeII GATC 9 cut(s) 91, 273, 318, 460, 592, 730, 737, 817, 1096
NlaIII CATG 8 cut(s) 161, 420, 686, 932, 986, 1063, 1174, 1345
NlaIV GGNNCC 2 cut(s) 769, 828
NsiI ATGCAT 1 cut(s) 504
NspI RCATGY 3 cut(s) 161, 986, 1174
NspV TTCGAA 1 cut(s) 993
PaeI GCATGC 1 cut(s) 986
PagI TCATGA 1 cut(s) 928
PciI ACATGT 1 cut(s) 157
PkrI GCNGC 2 cut(s) 483, 1249
PleI GAGTC 2 cut(s) 529, 1147
PpsI GAGTC 2 cut(s) 529, 1147
PscI ACATGT 1 cut(s) 157
PspN4I GGNNCC 2 cut(s) 769, 828
PspPI GGNCC 1 cut(s) 767
PsuI RGATCY 1 cut(s) 91
RsaI GTAC 2 cut(s) 521, 1229
RsaNI GTAC 2 cut(s) 520, 1228
RseI CAYNNNNRTG 1 cut(s) 354
SatI GCNGC 2 cut(s) 482, 1248
Sau3AI GATC 9 cut(s) 91, 273, 318, 460, 592, 730, 737, 817, 1096
Sau96I GGNCC 1 cut(s) 767
ScaI AGTACT 1 cut(s) 1229
SchI GAGTC 2 cut(s) 529, 1147
SduI GDGCHC 1 cut(s) 294
SfaNI GCATC 5 cut(s) 286, 387, 511, 514, 688
SfcI CTRYAG 1 cut(s) 917
SfuI TTCGAA 1 cut(s) 993
SmiMI CAYNNNNRTG 1 cut(s) 354
SmlI CTYRAG 4 cut(s) 710, 1028, 1133, 1253
SmoI CTYRAG 4 cut(s) 710, 1028, 1133, 1253
SphI GCATGC 1 cut(s) 986
Sse9I AATT 5 cut(s) 55, 863, 959, 1064, 1217
SsiI CCGC 2 cut(s) 448, 1190
SspMI CTAG 2 cut(s) 857, 1235
StyI CCWWGG 1 cut(s) 456
TaaI ACNGT 2 cut(s) 886, 1267
TaiI ACGT 1 cut(s) 1164
TaqI TCGA 7 cut(s) 533, 696, 736, 789, 807, 993, 1293
TasI AATT 5 cut(s) 55, 863, 959, 1064, 1217
TatI WGTACW 1 cut(s) 1227
TscAI CASTG 1 cut(s) 877
TseI GCWGC 2 cut(s) 481, 1247
TspDTI ATGAA 8 cut(s) 24, 350, 405, 734, 739, 917, 1092, 1133
TspRI CASTG 1 cut(s) 877
XapI RAATTY 2 cut(s) 863, 1064
XbaI TCTAGA 1 cut(s) 1234
XceI RCATGY 3 cut(s) 161, 986, 1174
XspI CTAG 2 cut(s) 857, 1235
ZrmI AGTACT 1 cut(s) 1229
Zsp2I ATGCAT 1 cut(s) 504
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.