Rroxscaffold_1G00051220

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000062
Physical Location & Seq
Reverse (-)
71867528 .. 71874299
6772 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00051220.1

Sequence Viewer

Length: 924 bp
ATGAAAACTCTTCCGCTGTCCAGTCTCTCTAGGTCTTCAGCAACCGATCAGAGTACCGGCCGTCCTCAGAAGCTCTTAAAAGCTTCTCAAGCTACCAAAGTTACTACTAGCTTTGCTTACAATTTGGCTGGTTCTCTGCCTCCTTTTGGTAAATTGAGCAAATTGAAGTTGGTGGTTCACAAATGCTTTCCCGGGAAATTGCTAACGGAGTTACTTAGCAGATCACCTCATCTACAGTATCTTATCTTAGAACATAGTGACACTAGTGTTAATGAAAAAGAATCCAAGTGTGGAGCAGACTCAGAACCTGATGAATGCCCGAAGCTGCGATGGAGTGCACCAGAGCTTGTGCCGAGTTGTTTAGAATCAAACCTCGAGACTATCTCCATTGAGGGATTCAAGGGGCAGCTGAATACAATGGAAGTGGCTAAATATTTCTTGAGGAATGGTGAAGTTTTGAAGAAGATGATGTTTTCTTCAGATCCTTTGTGTGAAGAAAAGCAGGCCTTACACAAAGAGCTTTTAATGGTTCCAAAGGTCGCCTGTTGTCTTCAAGAAGGCCCTGATCTCGACGAGGGGTCAGAGTATGAAGAGGGCTCAGACCATGAAGAGGGGTCAGAGCATGAACAAGGGTCAGATCATGAAGAGGGGTCAGAGAATGATCAAGGGTCAGAGCATCAGTGGAACCCACCAGATTGTGTGCCTACATGTTGTTTGTCACACCTCAAGATTGTCACCATAAGGGGATTCACAGGAAAAGGCAATGAGTTGGAAGTGGCAAAGTACTTGCTGAAGTATGGTCAAGTTTTGAATAAGATGACTATTTCTATGGACCGTCTTGATTTGAATGAAAAAGAGAAGATTTATAAGGAGTTTTTAATGGTTCCAAGGGGTTCAAGAACTAGTATAGTTGAATTTATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

307

Amino Acids

34.27

Weight (kDa)

5.41

Isoelectric Point (pI)

46.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBD PF08387 115 - 158 2.8e-14 FBD
FBD PF08387 231 - 275 1.9e-15 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 867
AciI CCGC 1 cut(s) 14
AclWI GGATC 1 cut(s) 476
AcoI YGGCCR 1 cut(s) 58
AcsI RAATTY 1 cut(s) 914
AcuI CTGAAG 3 cut(s) 21, 462, 812
AfaI GTAC 2 cut(s) 55, 785
AfiI CCNNNNNNNGG 2 cut(s) 146, 610
AflIII ACRYGT 1 cut(s) 707
AgsI TTSAA 8 cut(s) 166, 400, 460, 554, 811, 847, 897, 914
AhdI GACNNNNNGTC 1 cut(s) 577
AhlI ACTAGT 2 cut(s) 263, 902
AluBI AGCT 8 cut(s) 73, 83, 92, 111, 325, 346, 409, 520
AluI AGCT 8 cut(s) 73, 83, 92, 111, 325, 346, 409, 520
Alw21I GWGCWC 1 cut(s) 340
Alw26I GTCTC 2 cut(s) 29, 371
Alw44I GTGCAC 1 cut(s) 336
AlwI GGATC 1 cut(s) 476
AlwNI CAGNNNCTG 1 cut(s) 308
Ama87I CYCGRG 2 cut(s) 191, 374
AoxI GGCC 3 cut(s) 58, 504, 559
ApaLI GTGCAC 1 cut(s) 336
ApeKI GCWGC 2 cut(s) 325, 406
ApoI RAATTY 1 cut(s) 914
AspS9I GGNCC 2 cut(s) 560, 832
AsuC2I CCSGG 2 cut(s) 192, 193
AsuHPI GGTGA 3 cut(s) 216, 461, 727
AvaI CYCGRG 2 cut(s) 191, 374
AvaII GGWCC 1 cut(s) 832
BaeGI GKGCMC 1 cut(s) 340
BanII GRGCYC 1 cut(s) 599
BbsI GAAGAC 2 cut(s) 27, 542
Bbv12I GWGCWC 1 cut(s) 340
BbvI GCAGC 2 cut(s) 312, 418
BccI CCATC 1 cut(s) 324
BceAI ACGGC 1 cut(s) 45
BclI TGATCA 1 cut(s) 661
BcnI CCSGG 2 cut(s) 192, 193
BcoDI GTCTC 2 cut(s) 29, 371
BcuI ACTAGT 2 cut(s) 263, 902
BfaI CTAG 5 cut(s) 30, 108, 264, 903, 922
BfmI CTRYAG 1 cut(s) 233
BisI GCNGC 2 cut(s) 326, 407
BlsI GCNGC 2 cut(s) 327, 408
BmcAI AGTACT 1 cut(s) 785
Bme1390I CCNGG 2 cut(s) 192, 193
Bme18I GGWCC 1 cut(s) 832
BmeRI GACNNNNNGTC 1 cut(s) 577
BmeT110I CYCGRG 2 cut(s) 191, 374
BmgT120I GGNCC 2 cut(s) 560, 832
BmiI GGNNCC 3 cut(s) 531, 686, 885
BmrFI CCNGG 2 cut(s) 192, 193
BmsI GCATC 1 cut(s) 685
BpiI GAAGAC 2 cut(s) 27, 542
BplI GAGNNNNNCTC 2 cut(s) 368, 400
BpuEI CTTGAG 3 cut(s) 72, 460, 710
BpuMI CCSGG 2 cut(s) 192, 193
BsaJI CCNNGG 2 cut(s) 191, 887
Bsc4I CCNNNNNNNGG 2 cut(s) 146, 610
Bse118I RCCGGY 1 cut(s) 56
Bse1I ACTGG 1 cut(s) 21
Bse3DI GCAATG 1 cut(s) 769
BseDI CCNNGG 2 cut(s) 191, 887
BseLI CCNNNNNNNGG 2 cut(s) 146, 610
BseMI GCAATG 1 cut(s) 769
BseMII CTCAG 3 cut(s) 80, 315, 612
BseNI ACTGG 1 cut(s) 21
BseSI GKGCMC 1 cut(s) 340
BseX3I CGGCCG 1 cut(s) 58
BseXI GCAGC 2 cut(s) 312, 418
Bsh1285I CGRYCG 1 cut(s) 61
BshFI GGCC 3 cut(s) 60, 506, 561
BsiEI CGRYCG 1 cut(s) 61
BsiHKAI GWGCWC 1 cut(s) 340
BsiHKCI CYCGRG 2 cut(s) 191, 374
BsiSI CCGG 2 cut(s) 57, 192
BslI CCNNNNNNNGG 2 cut(s) 146, 610
BsmAI GTCTC 2 cut(s) 29, 371
BsmI GAATGC 1 cut(s) 320
BsnI GGCC 3 cut(s) 60, 506, 561
BsoBI CYCGRG 2 cut(s) 191, 374
Bsp1286I GDGCHC 2 cut(s) 340, 599
Bsp143I GATC 6 cut(s) 46, 221, 481, 565, 637, 661
BspACI CCGC 1 cut(s) 14
BspANI GGCC 3 cut(s) 60, 506, 561
BspCNI CTCAG 3 cut(s) 79, 314, 611
BspHI TCATGA 1 cut(s) 640
BspLI GGNNCC 3 cut(s) 531, 686, 885
BspPI GGATC 1 cut(s) 476
BsrDI GCAATG 1 cut(s) 769
BsrFI RCCGGY 1 cut(s) 56
BsrI ACTGG 1 cut(s) 21
BssAI RCCGGY 1 cut(s) 56
BssECI CCNNGG 2 cut(s) 191, 887
BssMI GATC 6 cut(s) 46, 221, 481, 565, 637, 661
BssT1I CCWWGG 1 cut(s) 887
Bst4CI ACNGT 2 cut(s) 237, 836
Bst6I CTCTTC 4 cut(s) 15, 585, 603, 639
BstC8I GCNNGC 1 cut(s) 504
BstDEI CTNAG 5 cut(s) 66, 215, 247, 301, 598
BstKTI GATC 6 cut(s) 49, 224, 484, 568, 640, 664
BstMAI GTCTC 2 cut(s) 29, 371
BstMBI GATC 6 cut(s) 46, 221, 481, 565, 637, 661
BstMCI CGRYCG 1 cut(s) 61
BstMWI GCNNNNNNNGC 1 cut(s) 89
BstNSI RCATGY 1 cut(s) 711
BstSCI CCNGG 2 cut(s) 190, 191
BstSFI CTRYAG 1 cut(s) 233
BstSLI GKGCMC 1 cut(s) 340
BstV1I GCAGC 2 cut(s) 312, 418
BstV2I GAAGAC 2 cut(s) 27, 542
BstX2I RGATCY 1 cut(s) 481
BstYI RGATCY 1 cut(s) 481
BstZI CGGCCG 1 cut(s) 58
BsuRI GGCC 3 cut(s) 60, 506, 561
BtgZI GCGATG 1 cut(s) 343
BtsIMutI CAGTG 1 cut(s) 686
Cac8I GCNNGC 1 cut(s) 504
CaiI CAGNNNCTG 1 cut(s) 308
CciI TCATGA 1 cut(s) 640
Cfr10I RCCGGY 1 cut(s) 56
Cfr13I GGNCC 2 cut(s) 560, 832
Cfr9I CCCGGG 1 cut(s) 191
Csp6I GTAC 2 cut(s) 54, 784
CspCI CAANNNNNGTGG 2 cut(s) 405, 440
CviAII CATG 4 cut(s) 605, 623, 641, 708
CviQI GTAC 2 cut(s) 54, 784
DdeI CTNAG 5 cut(s) 66, 215, 247, 301, 598
DpnI GATC 6 cut(s) 48, 223, 483, 567, 639, 663
DpnII GATC 6 cut(s) 46, 221, 481, 565, 637, 661
DriI GACNNNNNGTC 1 cut(s) 577
EaeI YGGCCR 1 cut(s) 58
EagI CGGCCG 1 cut(s) 58
Eam1104I CTCTTC 4 cut(s) 15, 585, 603, 639
Eam1105I GACNNNNNGTC 1 cut(s) 577
EarI CTCTTC 4 cut(s) 15, 585, 603, 639
EclXI CGGCCG 1 cut(s) 58
Eco130I CCWWGG 1 cut(s) 887
Eco147I AGGCCT 1 cut(s) 506
Eco24I GRGCYC 1 cut(s) 599
Eco47I GGWCC 1 cut(s) 832
Eco52I CGGCCG 1 cut(s) 58
Eco57I CTGAAG 3 cut(s) 21, 462, 812
Eco88I CYCGRG 2 cut(s) 191, 374
EcoO109I RGGNCCY 1 cut(s) 560
EcoT14I CCWWGG 1 cut(s) 887
EcoT38I GRGCYC 1 cut(s) 599
ErhI CCWWGG 1 cut(s) 887
FaeI CATG 4 cut(s) 608, 626, 644, 711
FalI AAGNNNNNCTT 2 cut(s) 491, 523
FatI CATG 4 cut(s) 604, 622, 640, 707
FbaI TGATCA 1 cut(s) 661
Fnu4HI GCNGC 2 cut(s) 326, 407
FriOI GRGCYC 1 cut(s) 599
Fsp4HI GCNGC 2 cut(s) 326, 407
FspBI CTAG 5 cut(s) 30, 108, 264, 903, 922
GluI GCNGC 2 cut(s) 326, 407
HaeIII GGCC 3 cut(s) 60, 506, 561
HapII CCGG 2 cut(s) 57, 192
Hin1II CATG 4 cut(s) 608, 626, 644, 711
HindIII AAGCTT 1 cut(s) 81
HinfI GANTC 5 cut(s) 281, 299, 365, 396, 747
HpaII CCGG 2 cut(s) 57, 192
HphI GGTGA 3 cut(s) 216, 461, 727
Hpy166II GTNNAC 2 cut(s) 178, 338
Hpy188III TCNNGA 8 cut(s) 376, 439, 554, 569, 641, 727, 839, 897
Hpy8I GTNNAC 2 cut(s) 178, 338
Hpy99I CGWCG 1 cut(s) 575
HpyAV CCTTC 1 cut(s) 551
HpyCH4III ACNGT 2 cut(s) 237, 836
HpyCH4V TGCA 1 cut(s) 338
HpyF10VI GCNNNNNNNGC 1 cut(s) 89
HpyF3I CTNAG 5 cut(s) 66, 215, 247, 301, 598
Hsp92II CATG 4 cut(s) 608, 626, 644, 711
Ksp22I TGATCA 1 cut(s) 661
Kzo9I GATC 6 cut(s) 46, 221, 481, 565, 637, 661
LmnI GCTCC 1 cut(s) 293
Lsp1109I GCAGC 2 cut(s) 312, 418
LweI GCATC 1 cut(s) 685
MaeI CTAG 5 cut(s) 30, 108, 264, 903, 922
MaeIII GTNAC 5 cut(s) 100, 210, 257, 717, 733
MalI GATC 6 cut(s) 48, 223, 483, 567, 639, 663
MboI GATC 6 cut(s) 46, 221, 481, 565, 637, 661
MflI RGATCY 1 cut(s) 481
MhlI GDGCHC 2 cut(s) 340, 599
MluCI AATT 5 cut(s) 121, 152, 161, 197, 914
MlyI GAGTC 1 cut(s) 293
MmeI TCCRAC 1 cut(s) 750
MseI TTAA 4 cut(s) 77, 270, 524, 878
MspA1I CMGCKG 2 cut(s) 16, 409
MspI CCGG 2 cut(s) 57, 192
MspR9I CCNGG 2 cut(s) 192, 193
Mva1269I GAATGC 1 cut(s) 320
MwoI GCNNNNNNNGC 1 cut(s) 89
NciI CCSGG 2 cut(s) 192, 193
NdeII GATC 6 cut(s) 46, 221, 481, 565, 637, 661
NlaIII CATG 4 cut(s) 608, 626, 644, 711
NlaIV GGNNCC 3 cut(s) 531, 686, 885
NmeAIII GCCGAG 1 cut(s) 378
NmuCI GTSAC 3 cut(s) 257, 717, 733
NspI RCATGY 1 cut(s) 711
PaeR7I CTCGAG 1 cut(s) 374
PagI TCATGA 1 cut(s) 640
PceI AGGCCT 1 cut(s) 506
PciI ACATGT 1 cut(s) 707
PctI GAATGC 1 cut(s) 320
PfeI GAWTC 4 cut(s) 281, 365, 396, 747
PkrI GCNGC 2 cut(s) 327, 408
PleI GAGTC 1 cut(s) 293
PpsI GAGTC 1 cut(s) 293
PscI ACATGT 1 cut(s) 707
PsiI TTATAA 1 cut(s) 867
PspN4I GGNNCC 3 cut(s) 531, 686, 885
PspPI GGNCC 2 cut(s) 560, 832
PstNI CAGNNNCTG 1 cut(s) 308
PsuI RGATCY 1 cut(s) 481
PvuII CAGCTG 1 cut(s) 409
RsaI GTAC 2 cut(s) 55, 785
RsaNI GTAC 2 cut(s) 54, 784
SaqAI TTAA 4 cut(s) 77, 270, 524, 878
SatI GCNGC 2 cut(s) 326, 407
Sau3AI GATC 6 cut(s) 46, 221, 481, 565, 637, 661
Sau96I GGNCC 2 cut(s) 560, 832
ScaI AGTACT 1 cut(s) 785
SchI GAGTC 1 cut(s) 293
ScrFI CCNGG 2 cut(s) 192, 193
SduI GDGCHC 2 cut(s) 340, 599
SfaNI GCATC 1 cut(s) 685
SfcI CTRYAG 1 cut(s) 233
Sfr274I CTCGAG 1 cut(s) 374
SinI GGWCC 1 cut(s) 832
SlaI CTCGAG 1 cut(s) 374
SmaI CCCGGG 1 cut(s) 193
SmlI CTYRAG 4 cut(s) 87, 374, 439, 725
SmoI CTYRAG 4 cut(s) 87, 374, 439, 725
SpeI ACTAGT 2 cut(s) 263, 902
Sse9I AATT 5 cut(s) 121, 152, 161, 197, 914
SseBI AGGCCT 1 cut(s) 506
SsiI CCGC 1 cut(s) 14
SspI AATATT 1 cut(s) 434
SspMI CTAG 5 cut(s) 30, 108, 264, 903, 922
StuI AGGCCT 1 cut(s) 506
StyD4I CCNGG 2 cut(s) 190, 191
StyI CCWWGG 1 cut(s) 887
TaaI ACNGT 2 cut(s) 237, 836
TaqI TCGA 2 cut(s) 375, 570
TasI AATT 5 cut(s) 121, 152, 161, 197, 914
TatI WGTACW 1 cut(s) 783
TfiI GAWTC 4 cut(s) 281, 365, 396, 747
Tru1I TTAA 4 cut(s) 77, 270, 524, 878
Tru9I TTAA 4 cut(s) 77, 270, 524, 878
TscAI CASTG 1 cut(s) 686
TseFI GTSAC 3 cut(s) 257, 717, 733
TseI GCWGC 2 cut(s) 325, 406
Tsp45I GTSAC 3 cut(s) 257, 717, 733
TspDTI ATGAA 8 cut(s) 17, 288, 327, 603, 621, 639, 657, 864
TspGWI ACGGA 1 cut(s) 221
TspMI CCCGGG 1 cut(s) 191
TspRI CASTG 1 cut(s) 686
VneI GTGCAC 1 cut(s) 336
VpaK11BI GGWCC 1 cut(s) 832
XapI RAATTY 1 cut(s) 914
XceI RCATGY 1 cut(s) 711
XhoI CTCGAG 1 cut(s) 374
XmaI CCCGGG 1 cut(s) 191
XspI CTAG 5 cut(s) 30, 108, 264, 903, 922
ZrmI AGTACT 1 cut(s) 785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.