MD11G1266700.v1.1

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000062
Physical Location & Seq
Forward (+)
38189865 .. 38192115
2251 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1266700.v1.1.491

Sequence Viewer

Length: 1389 bp
ATGATTACAGATAGGATTAGTGAACTGCCACATGAATTACTAAGTCAAATACTCTCATCCCTTCCAAGAAAATATGCTTTTAGGACCACTATTTTGTCTAAAAGATGGAAGAAATATTGGGCTTCTGTCCCCGAACTAGATTTTGTGTTCGCAGAACTGTCTGCTGTTTGGGCTATAAATACGACTTTAACACCACCAACCGGTATGTGGAAAAAAGAATATCTCTCTGACCATGTTGATCTTTTGAAGTTTGTCCATGGTGTGCTTTCTCTTCGCGACTCGTCAGATATTTGGAGGTTGCGTCTTCATTGTTATTGTCGTGCTCAGGATGTCTCACTTGTTGCTAGTTGGATTCGCACTGCTATTAGGCATAATGTTGTTGAACTTGATCTCCGTATTAAAGCAATTTATAAGGTTAATGAAGATGGCCCGACTTTGGAGTTGCCTAAATGCGTTTTCTTGTGCACAACACTCGTGGATTTCAAGGTGATGTCAAATTGTATAACATATGGTCCTCCTCCATCTGGCTGTTTCCCAAGTCTCAAGTCCCTTGATGTCAAAGTTGAATATCCTCGAGACGACTCAATGGAAAAGCTTTTTTCATGCTGCCCTGTACTTCAAGTTTTATCCATAACCGGAATTGTTTCGGATGTTGTTTCACAAGCTATAGCTTTGAAGTTCAAGGTCTCTGCGCCCGAACTGAAGACGTTAAAAATGACCTTATTTCGTGATTACAGGAAAGGTGATGGTCCAAGTTACAGTATCTCTATTAATGCCCCAAAGCTTGAAAACATTGACATCAAGCATGACTCTTTGCCAATGTATTCGTTTGAGAATGTACATTCCCTGGTCAAGGGCAGTGTTGATCTCTGTGTTCATTATGGTTCATACCATAATTACGTGTCCGAACATGCACCTGCGCTTCTGGAGCCGTTTTATAATGTTAAACATCTCTCTATTGCAGTTCATTATCTTAAGGGTTGTCTGCCTGCATTTGATAAACTGAGGGAATTGAAGCTGGTTATTCGTGATTGCTATTACTGGGATTTGCTAACAGAGTTTCTCAACAAATCACCCAATCTGGAATCTCTAGTCATAGAACATGAAGATGACCAGGTTTGCGTTGATGACTACGAGGAATCGTACTTCGAATGTGTCTTACACTCGGAGGATCAATGGAGAAGACCAGAATCTGTCCCAATTTGTCTCACATCACACCTCGAGAGTATCATGATCAGGGGATTCAAGGGATACCCTCACGAGGTGAAAGTGGCAAGGTACCTGTTAGACAATGGTAGAGTTTTGAAAAAGATGACAGTGGAGAATGAGTTTCACAAACAATTGAAGCAGCGAAAGGGTTCTAAGGATTGCGAACTTGAATTTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

463

Amino Acids

53.27

Weight (kDa)

6.63

Isoelectric Point (pI)

39.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 6 - 44 1.4e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 100 - 457 4.1e-10 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 114 - 218 7.7e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 396 - 439 3.9e-16 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 411, 939
AarI CACCTGC 1 cut(s) 925
Acc36I ACCTGC 1 cut(s) 925
Acc65I GGTACC 1 cut(s) 1278
AccB1I GGYRCC 1 cut(s) 1278
AccII CGCG 1 cut(s) 276
AclWI GGATC 1 cut(s) 1179
AcsI RAATTY 1 cut(s) 1379
AcuI CTGAAG 1 cut(s) 722
AdeI CACNNNGTG 1 cut(s) 1264
AfaI GTAC 4 cut(s) 615, 840, 1145, 1280
AfiI CCNNNNNNNGG 6 cut(s) 200, 207, 436, 524, 853, 1261
AflII CTTAAG 1 cut(s) 974
AflIII ACRYGT 1 cut(s) 900
AgeI ACCGGT 1 cut(s) 200
AjnI CCWGG 2 cut(s) 846, 1113
AloI GAACNNNNNNTCC 2 cut(s) 375, 407
AluBI AGCT 5 cut(s) 595, 665, 671, 784, 1018
AluI AGCT 5 cut(s) 595, 665, 671, 784, 1018
Alw21I GWGCWC 2 cut(s) 325, 467
Alw26I GTCTC 5 cut(s) 337, 545, 570, 691, 1211
Alw44I GTGCAC 1 cut(s) 463
AlwI GGATC 1 cut(s) 1179
AlwNI CAGNNNCTG 1 cut(s) 1193
Ama87I CYCGRG 2 cut(s) 573, 1220
AoxI GGCC 1 cut(s) 427
ApaLI GTGCAC 1 cut(s) 463
ApeKI GCWGC 2 cut(s) 606, 1348
ApoI RAATTY 1 cut(s) 1379
ArsI GACNNNNNNTTYG 2 cut(s) 76, 108
AseI ATTAAT 1 cut(s) 771
AsiGI ACCGGT 1 cut(s) 200
Asp700I GAANNNNTTC 2 cut(s) 643, 1357
Asp718I GGTACC 1 cut(s) 1278
AspLEI GCGC 2 cut(s) 694, 922
AspS9I GGNCC 4 cut(s) 84, 428, 512, 749
AsuHPI GGTGA 4 cut(s) 499, 755, 1065, 1276
AsuII TTCGAA 1 cut(s) 1149
AvaI CYCGRG 2 cut(s) 573, 1220
AvaII GGWCC 3 cut(s) 84, 512, 749
BaeGI GKGCMC 1 cut(s) 467
BanI GGYRCC 1 cut(s) 1278
BauI CACGAG 2 cut(s) 473, 1259
BbsI GAAGAC 3 cut(s) 296, 710, 1189
Bbv12I GWGCWC 2 cut(s) 325, 467
BbvI GCAGC 2 cut(s) 593, 1360
BccI CCATC 4 cut(s) 99, 419, 529, 740
BceAI ACGGC 1 cut(s) 916
BcgI CGANNNNNNTGC 2 cut(s) 454, 488
BciT130I CCWGG 2 cut(s) 848, 1115
BciVI GTATCC 1 cut(s) 1244
BclI TGATCA 1 cut(s) 1233
BcoDI GTCTC 5 cut(s) 337, 545, 570, 691, 1211
BfaI CTAG 3 cut(s) 137, 345, 1091
BfmI CTRYAG 1 cut(s) 666
BfrI CTTAAG 1 cut(s) 974
BfuAI ACCTGC 1 cut(s) 925
BfuI GTATCC 1 cut(s) 1244
BisI GCNGC 2 cut(s) 607, 1349
BlsI GCNGC 2 cut(s) 608, 1350
Bme1390I CCNGG 2 cut(s) 848, 1115
Bme18I GGWCC 3 cut(s) 84, 512, 749
BmeT110I CYCGRG 2 cut(s) 573, 1220
BmgT120I GGNCC 4 cut(s) 84, 428, 512, 749
BmiI GGNNCC 2 cut(s) 930, 1280
BmrFI CCNGG 2 cut(s) 848, 1115
BmrI ACTGGG 1 cut(s) 1051
BmuI ACTGGG 1 cut(s) 1051
BpiI GAAGAC 3 cut(s) 296, 710, 1189
BpmI CTGGAG 1 cut(s) 947
Bpu10I CCTNAGC 1 cut(s) 324
Bpu14I TTCGAA 1 cut(s) 1149
BpuEI CTTGAG 1 cut(s) 527
BsaAI YACGTR 1 cut(s) 901
BsaI GGTCTC 1 cut(s) 691
BsaJI CCNNGG 2 cut(s) 256, 846
BsaWI WCCGGW 2 cut(s) 200, 635
BsaXI ACNNNNNCTCC 6 cut(s) 286, 316, 375, 405, 1313, 1343
Bsc4I CCNNNNNNNGG 6 cut(s) 200, 207, 436, 524, 853, 1261
Bse118I RCCGGY 1 cut(s) 200
Bse1I ACTGG 1 cut(s) 1046
BseBI CCWGG 2 cut(s) 848, 1115
BseDI CCNNGG 2 cut(s) 256, 846
BseGI GGATG 3 cut(s) 56, 334, 655
BseLI CCNNNNNNNGG 6 cut(s) 200, 207, 436, 524, 853, 1261
BseMII CTCAG 2 cut(s) 338, 995
BseNI ACTGG 1 cut(s) 1046
BseRI GAGGAG 1 cut(s) 507
BseSI GKGCMC 1 cut(s) 467
BseXI GCAGC 2 cut(s) 593, 1360
Bsh1236I CGCG 1 cut(s) 276
BshFI GGCC 1 cut(s) 429
BshNI GGYRCC 1 cut(s) 1278
BshTI ACCGGT 1 cut(s) 200
BsiHKAI GWGCWC 2 cut(s) 325, 467
BsiHKCI CYCGRG 2 cut(s) 573, 1220
BsiSI CCGG 2 cut(s) 201, 636
BslFI GGGAC 3 cut(s) 113, 532, 1181
BslI CCNNNNNNNGG 6 cut(s) 200, 207, 436, 524, 853, 1261
BsmAI GTCTC 5 cut(s) 337, 545, 570, 691, 1211
BsmBI CGTCTC 1 cut(s) 570
BsmFI GGGAC 3 cut(s) 113, 532, 1181
BsnI GGCC 1 cut(s) 429
Bso31I GGTCTC 1 cut(s) 691
BsoBI CYCGRG 2 cut(s) 573, 1220
Bsp119I TTCGAA 1 cut(s) 1149
Bsp1286I GDGCHC 2 cut(s) 325, 467
Bsp1407I TGTACA 1 cut(s) 838
Bsp143I GATC 5 cut(s) 238, 388, 865, 1171, 1233
Bsp19I CCATGG 1 cut(s) 256
Bsp68I TCGCGA 1 cut(s) 276
BspANI GGCC 1 cut(s) 429
BspCNI CTCAG 2 cut(s) 337, 996
BspFNI CGCG 1 cut(s) 276
BspHI TCATGA 1 cut(s) 1230
BspLI GGNNCC 2 cut(s) 930, 1280
BspMI ACCTGC 1 cut(s) 925
BspPI GGATC 1 cut(s) 1179
BspT104I TTCGAA 1 cut(s) 1149
BspT107I GGYRCC 1 cut(s) 1278
BspTI CTTAAG 1 cut(s) 974
BspTNI GGTCTC 1 cut(s) 691
BsrFI RCCGGY 1 cut(s) 200
BsrGI TGTACA 1 cut(s) 838
BsrI ACTGG 1 cut(s) 1046
BssAI RCCGGY 1 cut(s) 200
BssECI CCNNGG 2 cut(s) 256, 846
BssMI GATC 5 cut(s) 238, 388, 865, 1171, 1233
BssSI CACGAG 2 cut(s) 473, 1259
BssT1I CCWWGG 1 cut(s) 256
Bst2BI CACGAG 2 cut(s) 473, 1259
Bst2UI CCWGG 2 cut(s) 848, 1115
Bst4CI ACNGT 3 cut(s) 159, 761, 1318
Bst6I CTCTTC 1 cut(s) 276
BstAFI CTTAAG 1 cut(s) 974
BstAUI TGTACA 1 cut(s) 838
BstBAI YACGTR 1 cut(s) 901
BstBI TTCGAA 1 cut(s) 1149
BstC8I GCNNGC 1 cut(s) 990
BstDEI CTNAG 4 cut(s) 41, 324, 1004, 1362
BstDSI CCRYGG 1 cut(s) 256
BstENI CCTNNNNNAGG 1 cut(s) 851
BstF5I GGATG 3 cut(s) 56, 334, 655
BstFNI CGCG 1 cut(s) 276
BstHHI GCGC 2 cut(s) 694, 922
BstKTI GATC 5 cut(s) 241, 391, 868, 1174, 1236
BstMAI GTCTC 5 cut(s) 337, 545, 570, 691, 1211
BstMBI GATC 5 cut(s) 238, 388, 865, 1171, 1233
BstMWI GCNNNNNNNGC 2 cut(s) 170, 928
BstNI CCWGG 2 cut(s) 848, 1115
BstNSI RCATGY 1 cut(s) 914
BstSCI CCNGG 2 cut(s) 846, 1113
BstSFI CTRYAG 1 cut(s) 666
BstSLI GKGCMC 1 cut(s) 467
BstUI CGCG 1 cut(s) 276
BstV1I GCAGC 2 cut(s) 593, 1360
BstV2I GAAGAC 3 cut(s) 296, 710, 1189
BsuI GTATCC 1 cut(s) 1244
BsuRI GGCC 1 cut(s) 429
BtgI CCRYGG 1 cut(s) 256
BtsCI GGATG 3 cut(s) 56, 334, 655
BtsI GCAGTG 2 cut(s) 357, 865
BtsIMutI CAGTG 3 cut(s) 357, 865, 1323
BtuMI TCGCGA 1 cut(s) 276
BveI ACCTGC 1 cut(s) 925
Cac8I GCNNGC 1 cut(s) 990
CaiI CAGNNNCTG 1 cut(s) 1193
CciI TCATGA 1 cut(s) 1230
CfoI GCGC 2 cut(s) 694, 922
Cfr10I RCCGGY 1 cut(s) 200
Cfr13I GGNCC 4 cut(s) 84, 428, 512, 749
CseI GACGC 1 cut(s) 290
CsiI ACCWGGT 1 cut(s) 1113
Csp6I GTAC 4 cut(s) 614, 839, 1144, 1279
CspAI ACCGGT 1 cut(s) 200
CspCI CAANNNNNGTGG 2 cut(s) 456, 491
CviAII CATG 8 cut(s) 32, 233, 257, 603, 806, 911, 1103, 1231
CviQI GTAC 4 cut(s) 614, 839, 1144, 1279
DdeI CTNAG 4 cut(s) 41, 324, 1004, 1362
DpnI GATC 5 cut(s) 240, 390, 867, 1173, 1235
DpnII GATC 5 cut(s) 238, 388, 865, 1171, 1233
DraIII CACNNNGTG 1 cut(s) 1264
Eam1104I CTCTTC 1 cut(s) 276
EarI CTCTTC 1 cut(s) 276
Eco130I CCWWGG 1 cut(s) 256
Eco31I GGTCTC 1 cut(s) 691
Eco47I GGWCC 3 cut(s) 84, 512, 749
Eco57I CTGAAG 1 cut(s) 722
Eco88I CYCGRG 2 cut(s) 573, 1220
EcoNI CCTNNNNNAGG 1 cut(s) 851
EcoRII CCWGG 2 cut(s) 846, 1113
EcoT14I CCWWGG 1 cut(s) 256
ErhI CCWWGG 1 cut(s) 256
Esp3I CGTCTC 1 cut(s) 570
FaeI CATG 8 cut(s) 35, 236, 260, 606, 809, 914, 1106, 1234
FaqI GGGAC 3 cut(s) 113, 532, 1181
FatI CATG 8 cut(s) 31, 232, 256, 602, 805, 910, 1102, 1230
FauNDI CATATG 1 cut(s) 508
FbaI TGATCA 1 cut(s) 1233
Fnu4HI GCNGC 2 cut(s) 607, 1349
FokI GGATG 3 cut(s) 43, 341, 662
Fsp4HI GCNGC 2 cut(s) 607, 1349
FspBI CTAG 3 cut(s) 137, 345, 1091
GlaI GCGC 2 cut(s) 693, 921
GluI GCNGC 2 cut(s) 607, 1349
GsuI CTGGAG 1 cut(s) 947
HaeIII GGCC 1 cut(s) 429
HapII CCGG 2 cut(s) 201, 636
HgaI GACGC 1 cut(s) 290
HhaI GCGC 2 cut(s) 694, 922
Hin1II CATG 8 cut(s) 35, 236, 260, 606, 809, 914, 1106, 1234
Hin6I GCGC 2 cut(s) 692, 920
HinP1I GCGC 2 cut(s) 692, 920
HindIII AAGCTT 2 cut(s) 593, 782
HinfI GANTC 8 cut(s) 278, 352, 581, 809, 1085, 1139, 1190, 1242
HpaII CCGG 2 cut(s) 201, 636
HphI GGTGA 4 cut(s) 499, 755, 1065, 1276
Hpy166II GTNNAC 2 cut(s) 23, 465
Hpy188I TCNGA 5 cut(s) 229, 286, 649, 907, 1168
Hpy8I GTNNAC 2 cut(s) 23, 465
HpyAV CCTTC 1 cut(s) 71
HpyCH4III ACNGT 3 cut(s) 159, 761, 1318
HpyCH4IV ACGT 2 cut(s) 707, 900
HpyCH4V TGCA 4 cut(s) 465, 914, 962, 992
HpyF10VI GCNNNNNNNGC 2 cut(s) 170, 928
HpyF3I CTNAG 4 cut(s) 41, 324, 1004, 1362
HpySE526I ACGT 2 cut(s) 707, 900
Hsp92II CATG 8 cut(s) 35, 236, 260, 606, 809, 914, 1106, 1234
HspAI GCGC 2 cut(s) 692, 920
KpnI GGTACC 1 cut(s) 1282
Ksp22I TGATCA 1 cut(s) 1233
Kzo9I GATC 5 cut(s) 238, 388, 865, 1171, 1233
LmnI GCTCC 1 cut(s) 928
Lsp1109I GCAGC 2 cut(s) 593, 1360
MabI ACCWGGT 1 cut(s) 1113
MaeI CTAG 3 cut(s) 137, 345, 1091
MaeII ACGT 2 cut(s) 707, 900
MaeIII GTNAC 1 cut(s) 755
MalI GATC 5 cut(s) 240, 390, 867, 1173, 1235
MboI GATC 5 cut(s) 238, 388, 865, 1171, 1233
MboII GAAGA 7 cut(s) 121, 263, 296, 434, 715, 1118, 1194
MfeI CAATTG 1 cut(s) 1340
MhlI GDGCHC 2 cut(s) 325, 467
MluCI AATT 9 cut(s) 35, 405, 496, 639, 895, 1010, 1200, 1340, 1379
MlyI GAGTC 3 cut(s) 272, 575, 803
MmeI TCCRAC 1 cut(s) 329
MroXI GAANNNNTTC 2 cut(s) 643, 1357
MseI TTAA 7 cut(s) 188, 399, 417, 710, 771, 945, 975
MslI CAYNNNNRTG 1 cut(s) 1107
MspCI CTTAAG 1 cut(s) 974
MspI CCGG 2 cut(s) 201, 636
MspR9I CCNGG 2 cut(s) 848, 1115
MunI CAATTG 1 cut(s) 1340
MvaI CCWGG 2 cut(s) 848, 1115
MvnI CGCG 1 cut(s) 276
MwoI GCNNNNNNNGC 2 cut(s) 170, 928
NcoI CCATGG 1 cut(s) 256
NdeI CATATG 1 cut(s) 508
NdeII GATC 5 cut(s) 238, 388, 865, 1171, 1233
NlaIII CATG 8 cut(s) 35, 236, 260, 606, 809, 914, 1106, 1234
NlaIV GGNNCC 2 cut(s) 930, 1280
NruI TCGCGA 1 cut(s) 276
NspI RCATGY 1 cut(s) 914
NspV TTCGAA 1 cut(s) 1149
PaeR7I CTCGAG 2 cut(s) 573, 1220
PagI TCATGA 1 cut(s) 1230
PaqCI CACCTGC 1 cut(s) 925
PdmI GAANNNNTTC 2 cut(s) 643, 1357
PfeI GAWTC 5 cut(s) 352, 1085, 1139, 1190, 1242
PinAI ACCGGT 1 cut(s) 200
PkrI GCNGC 2 cut(s) 608, 1350
PleI GAGTC 3 cut(s) 272, 575, 803
PpsI GAGTC 3 cut(s) 272, 575, 803
Ppu21I YACGTR 1 cut(s) 901
PshBI ATTAAT 1 cut(s) 771
PsiI TTATAA 2 cut(s) 411, 939
Psp6I CCWGG 2 cut(s) 846, 1113
PspGI CCWGG 2 cut(s) 846, 1113
PspN4I GGNNCC 2 cut(s) 930, 1280
PspPI GGNCC 4 cut(s) 84, 428, 512, 749
PstNI CAGNNNCTG 1 cut(s) 1193
RruI TCGCGA 1 cut(s) 276
RsaI GTAC 4 cut(s) 615, 840, 1145, 1280
RsaNI GTAC 4 cut(s) 614, 839, 1144, 1279
RseI CAYNNNNRTG 1 cut(s) 1107
SaqAI TTAA 7 cut(s) 188, 399, 417, 710, 771, 945, 975
SatI GCNGC 2 cut(s) 607, 1349
Sau3AI GATC 5 cut(s) 238, 388, 865, 1171, 1233
Sau96I GGNCC 4 cut(s) 84, 428, 512, 749
SchI GAGTC 3 cut(s) 272, 575, 803
ScrFI CCNGG 2 cut(s) 848, 1115
SduI GDGCHC 2 cut(s) 325, 467
SexAI ACCWGGT 1 cut(s) 1113
SfcI CTRYAG 1 cut(s) 666
Sfr274I CTCGAG 2 cut(s) 573, 1220
SfuI TTCGAA 1 cut(s) 1149
SinI GGWCC 3 cut(s) 84, 512, 749
SlaI CTCGAG 2 cut(s) 573, 1220
SmiMI CAYNNNNRTG 1 cut(s) 1107
SmlI CTYRAG 4 cut(s) 542, 573, 974, 1220
SmoI CTYRAG 4 cut(s) 542, 573, 974, 1220
Sse9I AATT 9 cut(s) 35, 405, 496, 639, 895, 1010, 1200, 1340, 1379
SspI AATATT 1 cut(s) 116
SspMI CTAG 3 cut(s) 137, 345, 1091
StyD4I CCNGG 2 cut(s) 846, 1113
StyI CCWWGG 1 cut(s) 256
TaaI ACNGT 3 cut(s) 159, 761, 1318
TaiI ACGT 2 cut(s) 710, 903
TaqI TCGA 3 cut(s) 574, 1149, 1221
TasI AATT 9 cut(s) 35, 405, 496, 639, 895, 1010, 1200, 1340, 1379
TatI WGTACW 2 cut(s) 613, 838
TfiI GAWTC 5 cut(s) 352, 1085, 1139, 1190, 1242
Tru1I TTAA 7 cut(s) 188, 399, 417, 710, 771, 945, 975
Tru9I TTAA 7 cut(s) 188, 399, 417, 710, 771, 945, 975
TscAI CASTG 3 cut(s) 364, 865, 1323
TseI GCWGC 2 cut(s) 606, 1348
TspDTI ATGAA 8 cut(s) 48, 296, 435, 591, 866, 876, 956, 1119
TspGWI ACGGA 1 cut(s) 383
TspRI CASTG 3 cut(s) 364, 865, 1323
Vha464I CTTAAG 1 cut(s) 974
VneI GTGCAC 1 cut(s) 463
VpaK11BI GGWCC 3 cut(s) 84, 512, 749
VspI ATTAAT 1 cut(s) 771
XagI CCTNNNNNAGG 1 cut(s) 851
XapI RAATTY 1 cut(s) 1379
XceI RCATGY 1 cut(s) 914
XcmI CCANNNNNNNNNTGG 1 cut(s) 204
XhoI CTCGAG 2 cut(s) 573, 1220
XmnI GAANNNNTTC 2 cut(s) 643, 1357
XspI CTAG 3 cut(s) 137, 345, 1091
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.