FvH4_3g17160

F-box LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000062
Physical Location & Seq
Forward (+)
10859461 .. 10863050
3590 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g17160.t1

Sequence Viewer

Length: 1323 bp
ATGGGGTCCAAGAGTCGAGCAAGAGTTGAGGACAGGATCAGCCAACTACCGGATGGTGTTCTTCGTCACATAGTTACCTTTGTTCCAACAAAGTGTTCTGTGAGAACCAGCGTATTGTCTACAAGGTGGAAGGACATGTGGACTCGTGTTCCTACTCTCTACTTGAATGATATGGAGTTCTCTTCCTCTGCTGATTTTGTGGAGTTTGTTGATCGAGCACTTCTCGTTCGCGATTCAGCGACTATTCAAAAATTTCATCTACACTTCGAGGAATGTCCTGCTGAGTATTTCTCTCGTGTTGATGGTTGGCTACAAGTTGTCGTTAGGTGTAATGTTGTGGAACTTGATCTTTCTGTTGTTTCAGATGGAGAAGAGATGCTTGAGTTGCCAAACAGTCTTTTGACTTGCAAAACACTAGAGGCTTTGAAGCTGGAGTTGAATTATAATATCAAACTTCCTACATCATGGCGTTGCCCAAAGCTCAAATTCTTTGATGTCCAGTTTACTTGTCCTGATGGTGACTCGATGGATTTTTCTCAGTTTCCTGCACTTGAACATTTGGGAATAGGTGGATCACTTGGATACATTGGTTTTAGTTTCAACATTTCTGTGCCAGAACTGAAGACTTTAAGGATATGTTTAGGATCTGAAACTATTACTCGACCATGCAATTTTCTCATAAATGCCCCAAAGCTTCAAAAGCTTGATGTCAGTGAGGGATTTTTGTCAAATTATACCTTCAAGAATACAAAATCTATAATTGAAGCCAGTATTGAAATCACTACCTTGAAGGATGATAAAAGTGAGGCCTCTGCTGACCGTGCAACTAAGTTTCTGGCTGGAATTTCTGGTGTTAAATGTCTGACTCTTTCTCCTTTCTCTATGGCTTGCTCTATACCCGTCTTTGATAATTTGAGCGAATTGATGCTGCTGCGTGATGGTCAATGGTGGAAAATTCTGATGAAGTTTCTCGAGAGATCACTTAATCTAGAATCTTTTGTCATAAAGCATGAGTCTTGTCAACCCGGCCACTATTTTCCTGGGCAGAAAGAGGTGTTTATTGAGCTTCCGGATTGCAGGAACCCAGACCACCCAGACCACGTAGAAGAAGTGTTGGACTGGACTCCACCAGAGTCTGTTCCCAAGTGTCTGTTGTCATCCCTCAAGACTATCTCCATAAAGGGTTTCAAAGGAAAGGAATTCTTTGGATTTCCAGAAGAGATGGAATTGATCAAGTATCTGTTGAAGAATTGTCTGCTTGGAGAATATGACTGTTTACACTCCTGGTCTTCATTATGGTACACGAGAAGAATTTTACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

441

Amino Acids

50.23

Weight (kDa)

5.62

Isoelectric Point (pI)

45.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 13 - 51 3e-06 F-box domain
LRR_At5g56370 PF24758 100 - 256 3.9e-06 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 377 - 418 1.2e-10 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 444
AccI GTMKAC 1 cut(s) 119
AccII CGCG 1 cut(s) 231
AccIII TCCGGA 1 cut(s) 1069
AclWI GGATC 3 cut(s) 44, 580, 652
AcoI YGGCCR 1 cut(s) 1027
AcsI RAATTY 6 cut(s) 251, 485, 843, 954, 1199, 1311
AcuI CTGAAG 1 cut(s) 641
AfaI GTAC 1 cut(s) 1301
AfiI CCNNNNNNNGG 1 cut(s) 49
AflIII ACRYGT 1 cut(s) 135
AjnI CCWGG 2 cut(s) 1039, 1283
AjuI GAANNNNNNNTTGG 2 cut(s) 79, 111
AluBI AGCT 5 cut(s) 430, 481, 694, 703, 1066
AluI AGCT 5 cut(s) 430, 481, 694, 703, 1066
Alw21I GWGCWC 1 cut(s) 220
AlwI GGATC 3 cut(s) 44, 580, 652
AlwNI CAGNNNCTG 1 cut(s) 1136
Ama87I CYCGRG 1 cut(s) 971
Aor13HI TCCGGA 1 cut(s) 1069
AoxI GGCC 2 cut(s) 807, 1027
ApeKI GCWGC 2 cut(s) 928, 931
ApoI RAATTY 6 cut(s) 251, 485, 843, 954, 1199, 1311
AspS9I GGNCC 1 cut(s) 6
AsuC2I CCSGG 1 cut(s) 1026
AsuHPI GGTGA 1 cut(s) 530
AvaI CYCGRG 1 cut(s) 971
AvaII GGWCC 1 cut(s) 6
BaeI ACNNNNGTAYC 2 cut(s) 574, 607
BauI CACGAG 3 cut(s) 144, 294, 1303
BbsI GAAGAC 2 cut(s) 629, 1281
Bbv12I GWGCWC 1 cut(s) 220
BbvI GCAGC 2 cut(s) 915, 918
BccI CCATC 7 cut(s) 47, 296, 359, 509, 520, 932, 1216
BciT130I CCWGG 2 cut(s) 1041, 1285
BciVI GTATCC 1 cut(s) 575
BclI TGATCA 1 cut(s) 1230
BcnI CCSGG 1 cut(s) 1026
BfaI CTAG 2 cut(s) 416, 989
BfuI GTATCC 1 cut(s) 575
BisI GCNGC 2 cut(s) 929, 932
BlsI GCNGC 2 cut(s) 930, 933
Bme1390I CCNGG 3 cut(s) 1026, 1041, 1285
Bme18I GGWCC 1 cut(s) 6
BmeT110I CYCGRG 1 cut(s) 971
BmgT120I GGNCC 1 cut(s) 6
BmiI GGNNCC 2 cut(s) 7, 1082
BmrFI CCNGG 3 cut(s) 1026, 1041, 1285
BmsI GCATC 2 cut(s) 366, 915
BpiI GAAGAC 2 cut(s) 629, 1281
BplI GAGNNNNNCTC 4 cut(s) 207, 239, 275, 307
BpmI CTGGAG 1 cut(s) 452
BpuEI CTTGAG 2 cut(s) 401, 1148
BpuMI CCSGG 1 cut(s) 1026
BsaAI YACGTR 1 cut(s) 1102
BsaJI CCNNGG 1 cut(s) 1040
BsaWI WCCGGW 2 cut(s) 49, 1069
BsaXI ACNNNNNCTCC 2 cut(s) 856, 886
Bsc4I CCNNNNNNNGG 1 cut(s) 49
Bse1I ACTGG 3 cut(s) 499, 768, 1124
BseAI TCCGGA 1 cut(s) 1069
BseBI CCWGG 2 cut(s) 1041, 1285
BseDI CCNNGG 1 cut(s) 1040
BseGI GGATG 3 cut(s) 58, 799, 1157
BseLI CCNNNNNNNGG 1 cut(s) 49
BseMII CTCAG 2 cut(s) 273, 551
BseNI ACTGG 3 cut(s) 499, 768, 1124
BseXI GCAGC 2 cut(s) 915, 918
BsgI GTGCAG 1 cut(s) 531
Bsh1236I CGCG 1 cut(s) 231
BshFI GGCC 2 cut(s) 809, 1029
BsiHKAI GWGCWC 1 cut(s) 220
BsiHKCI CYCGRG 1 cut(s) 971
BsiSI CCGG 3 cut(s) 50, 1026, 1070
BslI CCNNNNNNNGG 1 cut(s) 49
BsnI GGCC 2 cut(s) 809, 1029
BsoBI CYCGRG 1 cut(s) 971
Bsp1286I GDGCHC 1 cut(s) 220
Bsp13I TCCGGA 1 cut(s) 1069
Bsp143I GATC 7 cut(s) 36, 211, 346, 572, 644, 977, 1230
Bsp68I TCGCGA 1 cut(s) 231
BspANI GGCC 2 cut(s) 809, 1029
BspCNI CTCAG 2 cut(s) 274, 550
BspEI TCCGGA 1 cut(s) 1069
BspFNI CGCG 1 cut(s) 231
BspLI GGNNCC 2 cut(s) 7, 1082
BspPI GGATC 3 cut(s) 44, 580, 652
BsrI ACTGG 3 cut(s) 499, 768, 1124
BssECI CCNNGG 1 cut(s) 1040
BssMI GATC 7 cut(s) 36, 211, 346, 572, 644, 977, 1230
BssSI CACGAG 3 cut(s) 144, 294, 1303
Bst2BI CACGAG 3 cut(s) 144, 294, 1303
Bst2UI CCWGG 2 cut(s) 1041, 1285
Bst4CI ACNGT 3 cut(s) 395, 821, 1274
Bst6I CTCTTC 3 cut(s) 187, 366, 1212
BstBAI YACGTR 1 cut(s) 1102
BstC8I GCNNGC 1 cut(s) 889
BstDEI CTNAG 3 cut(s) 282, 537, 828
BstF5I GGATG 3 cut(s) 58, 799, 1157
BstFNI CGCG 1 cut(s) 231
BstKTI GATC 7 cut(s) 39, 214, 349, 575, 647, 980, 1233
BstMBI GATC 7 cut(s) 36, 211, 346, 572, 644, 977, 1230
BstMWI GCNNNNNNNGC 3 cut(s) 385, 700, 821
BstNI CCWGG 2 cut(s) 1041, 1285
BstNSI RCATGY 1 cut(s) 139
BstSCI CCNGG 3 cut(s) 1024, 1039, 1283
BstUI CGCG 1 cut(s) 231
BstV1I GCAGC 2 cut(s) 915, 918
BstV2I GAAGAC 2 cut(s) 629, 1281
BstX2I RGATCY 1 cut(s) 644
BstYI RGATCY 1 cut(s) 644
BsuI GTATCC 1 cut(s) 575
BsuRI GGCC 2 cut(s) 809, 1029
BtsCI GGATG 3 cut(s) 58, 799, 1157
BtsIMutI CAGTG 1 cut(s) 718
BtuMI TCGCGA 1 cut(s) 231
Cac8I GCNNGC 1 cut(s) 889
CaiI CAGNNNCTG 1 cut(s) 1136
Cfr13I GGNCC 1 cut(s) 6
Csp6I GTAC 1 cut(s) 1300
CviAII CATG 4 cut(s) 136, 465, 666, 1010
CviQI GTAC 1 cut(s) 1300
DdeI CTNAG 3 cut(s) 282, 537, 828
DpnI GATC 7 cut(s) 38, 213, 348, 574, 646, 979, 1232
DpnII GATC 7 cut(s) 36, 211, 346, 572, 644, 977, 1230
EaeI YGGCCR 1 cut(s) 1027
Eam1104I CTCTTC 3 cut(s) 187, 366, 1212
EarI CTCTTC 3 cut(s) 187, 366, 1212
Eco147I AGGCCT 1 cut(s) 809
Eco47I GGWCC 1 cut(s) 6
Eco57I CTGAAG 1 cut(s) 641
Eco88I CYCGRG 1 cut(s) 971
EcoRI GAATTC 1 cut(s) 1199
EcoRII CCWGG 2 cut(s) 1039, 1283
FaeI CATG 4 cut(s) 139, 468, 669, 1013
FalI AAGNNNNNCTT 4 cut(s) 363, 395, 1187, 1219
FatI CATG 4 cut(s) 135, 464, 665, 1009
FbaI TGATCA 1 cut(s) 1230
FblI GTMKAC 1 cut(s) 119
Fnu4HI GCNGC 2 cut(s) 929, 932
FokI GGATG 3 cut(s) 65, 806, 1144
Fsp4HI GCNGC 2 cut(s) 929, 932
FspBI CTAG 2 cut(s) 416, 989
GluI GCNGC 2 cut(s) 929, 932
GsuI CTGGAG 1 cut(s) 452
HaeIII GGCC 2 cut(s) 809, 1029
HapII CCGG 3 cut(s) 50, 1026, 1070
Hin1II CATG 4 cut(s) 139, 468, 669, 1013
HincII GTYRAC 1 cut(s) 1022
HindII GTYRAC 1 cut(s) 1022
HindIII AAGCTT 2 cut(s) 692, 701
HinfI GANTC 9 cut(s) 13, 142, 233, 521, 865, 992, 1013, 1123, 1133
HpaII CCGG 3 cut(s) 50, 1026, 1070
HphI GGTGA 1 cut(s) 530
Hpy166II GTNNAC 6 cut(s) 120, 141, 504, 1022, 1277, 1302
Hpy188I TCNGA 4 cut(s) 364, 649, 864, 960
Hpy188III TCNNGA 9 cut(s) 230, 512, 742, 971, 973, 989, 1070, 1165, 1214
Hpy8I GTNNAC 6 cut(s) 120, 141, 504, 1022, 1277, 1302
HpyAV CCTTC 3 cut(s) 124, 748, 784
HpyCH4III ACNGT 3 cut(s) 395, 821, 1274
HpyCH4IV ACGT 1 cut(s) 1101
HpyCH4V TGCA 5 cut(s) 408, 548, 669, 824, 1077
HpyF10VI GCNNNNNNNGC 3 cut(s) 385, 700, 821
HpyF3I CTNAG 3 cut(s) 282, 537, 828
HpySE526I ACGT 1 cut(s) 1101
Hsp92II CATG 4 cut(s) 139, 468, 669, 1013
Kpn2I TCCGGA 1 cut(s) 1069
Ksp22I TGATCA 1 cut(s) 1230
Kzo9I GATC 7 cut(s) 36, 211, 346, 572, 644, 977, 1230
Lsp1109I GCAGC 2 cut(s) 915, 918
LweI GCATC 2 cut(s) 366, 915
MaeI CTAG 2 cut(s) 416, 989
MaeII ACGT 1 cut(s) 1101
MaeIII GTNAC 3 cut(s) 65, 73, 518
MalI GATC 7 cut(s) 38, 213, 348, 574, 646, 979, 1232
MboI GATC 7 cut(s) 36, 211, 346, 572, 644, 977, 1230
MboII GAAGA 9 cut(s) 53, 174, 383, 634, 1118, 1229, 1258, 1281, 1320
MflI RGATCY 1 cut(s) 644
MhlI GDGCHC 1 cut(s) 220
MlyI GAGTC 7 cut(s) 22, 136, 515, 859, 1022, 1117, 1142
MmeI TCCRAC 2 cut(s) 110, 1095
MnlI CCTC 9 cut(s) 22, 196, 262, 412, 709, 799, 820, 1045, 1172
MroI TCCGGA 1 cut(s) 1069
MseI TTAA 3 cut(s) 629, 855, 984
MslI CAYNNNNRTG 1 cut(s) 608
MspI CCGG 3 cut(s) 50, 1026, 1070
MspR9I CCNGG 3 cut(s) 1026, 1041, 1285
MvaI CCWGG 2 cut(s) 1041, 1285
MvnI CGCG 1 cut(s) 231
MwoI GCNNNNNNNGC 3 cut(s) 385, 700, 821
NciI CCSGG 1 cut(s) 1026
NdeII GATC 7 cut(s) 36, 211, 346, 572, 644, 977, 1230
NlaIII CATG 4 cut(s) 139, 468, 669, 1013
NlaIV GGNNCC 2 cut(s) 7, 1082
NmuCI GTSAC 2 cut(s) 65, 518
NruI TCGCGA 1 cut(s) 231
NspI RCATGY 1 cut(s) 139
PaeR7I CTCGAG 1 cut(s) 971
PceI AGGCCT 1 cut(s) 809
PciI ACATGT 1 cut(s) 135
PfeI GAWTC 2 cut(s) 233, 992
PkrI GCNGC 2 cut(s) 930, 933
PleI GAGTC 7 cut(s) 21, 136, 515, 859, 1021, 1117, 1141
PpsI GAGTC 7 cut(s) 21, 136, 515, 859, 1021, 1117, 1141
Ppu21I YACGTR 1 cut(s) 1102
PscI ACATGT 1 cut(s) 135
PsiI TTATAA 1 cut(s) 444
Psp6I CCWGG 2 cut(s) 1039, 1283
PspGI CCWGG 2 cut(s) 1039, 1283
PspN4I GGNNCC 2 cut(s) 7, 1082
PspPI GGNCC 1 cut(s) 6
PstNI CAGNNNCTG 1 cut(s) 1136
PsuI RGATCY 1 cut(s) 644
RruI TCGCGA 1 cut(s) 231
RsaI GTAC 1 cut(s) 1301
RsaNI GTAC 1 cut(s) 1300
RseI CAYNNNNRTG 1 cut(s) 608
SaqAI TTAA 3 cut(s) 629, 855, 984
SatI GCNGC 2 cut(s) 929, 932
Sau3AI GATC 7 cut(s) 36, 211, 346, 572, 644, 977, 1230
Sau96I GGNCC 1 cut(s) 6
SchI GAGTC 7 cut(s) 22, 136, 515, 859, 1022, 1117, 1142
ScrFI CCNGG 3 cut(s) 1026, 1041, 1285
SduI GDGCHC 1 cut(s) 220
SfaNI GCATC 2 cut(s) 366, 915
Sfr274I CTCGAG 1 cut(s) 971
SinI GGWCC 1 cut(s) 6
SlaI CTCGAG 1 cut(s) 971
SmiMI CAYNNNNRTG 1 cut(s) 608
SmlI CTYRAG 3 cut(s) 380, 971, 1163
SmoI CTYRAG 3 cut(s) 380, 971, 1163
SseBI AGGCCT 1 cut(s) 809
SspMI CTAG 2 cut(s) 416, 989
StuI AGGCCT 1 cut(s) 809
StyD4I CCNGG 3 cut(s) 1024, 1039, 1283
TaaI ACNGT 3 cut(s) 395, 821, 1274
TaiI ACGT 1 cut(s) 1104
TaqI TCGA 6 cut(s) 16, 214, 267, 524, 661, 972
TfiI GAWTC 2 cut(s) 233, 992
Tru1I TTAA 3 cut(s) 629, 855, 984
Tru9I TTAA 3 cut(s) 629, 855, 984
TscAI CASTG 1 cut(s) 718
TseFI GTSAC 2 cut(s) 65, 518
TseI GCWGC 2 cut(s) 928, 931
Tsp45I GTSAC 2 cut(s) 65, 518
TspDTI ATGAA 3 cut(s) 245, 977, 1281
TspRI CASTG 1 cut(s) 718
VpaK11BI GGWCC 1 cut(s) 6
XapI RAATTY 6 cut(s) 251, 485, 843, 954, 1199, 1311
XbaI TCTAGA 1 cut(s) 988
XceI RCATGY 1 cut(s) 139
XcmI CCANNNNNNNNNTGG 2 cut(s) 50, 1037
XhoI CTCGAG 1 cut(s) 971
XmiI GTMKAC 1 cut(s) 119
XspI CTAG 2 cut(s) 416, 989
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.