pycom11g23450

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0000062
Physical Location & Seq
Forward (+)
26447411 .. 26448955
1545 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g23450.1

Sequence Viewer

Length: 1377 bp
ATGGGTTCCACATCAAAACTTCAAGGCATGTTTACAGATAGGATTAGTGAACTGCCACATGAATTTCTAAGTCGAATACTCTCATTCCTTCCAAGAAAATATGCTTTTAGGACCACTATTTTGTCTAAAAGATGGAAGAAATATTGGGCTTCTGTCCCCGAACTAGATTTTGTGTTCGAAGAACTGTCTGCTGTTTGGGCTATAAATACGATTAAAACACCAACTCCTGGTATGTGGAAAGACAAATATCTGTCTGACCATGTTGATCTTTTGAGGTTTGTCCATGGTGTGCTTTCTCTTCGTGACTCGTCAGATATTCGGAGGTTGCGTCTTCATTGTTATTGTCGTGCTCAGGATGTCTCACTTGTTGCTAGTTGGATTCGCACTGCTATTAGGCATAATGTTGTTGAACTTGATCTTCGTATTAAAGCAATTTATAAGGTTAATGAAGATGGCCCGACCTTGGAGTTGCCTAAATGCGTTTTCTTGTGCACAACACTCGTGGATTTCAAGGTGATGTCAAATTGTATAACATATGCTCCTCCTACATCTGGCTGTTTCCCAAGTCTCAAGTCCCTTGATGTCAAAGTTGAATATCCTCAAGACGACTCAATGGAAAAGCTTTTTTCATTCTGCCCTGTACTTCAAGTTTTATGTATAACTGGAATTGTTTCGGATGTTGTTTCACAAACTATAGCTTTGAAGTTTAAGGTCTCTGCGCCTGAACTGAAGATGTTAAAAATGATCTTATTTCGTGATTACGGGAAAGGTGATGGTCCAAGTTACAGTATTTCTATTAATGCCCCAAAGCTTGAAAGCATTGACATCAAGCATGACTCTTTGCCAATGTATTCGTTTGAGAATGTACATTCCCTGGTCAAAGGCAGTGTTGATCTCTGTGTTCATTATGGTTCATACCATAATTACGTGTCCGAACATGCACCTGCGCTTCTGGAGCCATTTTATAATGTTAAACATCTCTCCATTGCAGTTCATTCTCTTAAGGTACGTGTGTATACCCTAACTTGTATGGTTCATAGTGGTTGTTTGCCTGCATTTGATAAACTGAGGGAATTGAAGCTGGTTATTCGTGATTGCTATTACTGGGATTTGCTAACAGAGTTTCTCAACAAATCACCCAATCTGGAATCTCTAGTCATAGAACATGAAGATGTAAGATGTATTTCCACTCATGCTAATTCATACCGACGTGCAATTTTCTTTACTATTCTCACTTACTTCATGCTTTTCAGGACCAGGATTGCATCGATGACTACGAGGAATCGTACTTCGAATGTGTCTTATACTCGGAGGATCAATGGAGTAGACCAGAATCTGTGCCAATTTGTCTCACATCACACCTCGAGAGTATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

459

Amino Acids

52.66

Weight (kDa)

8.92

Isoelectric Point (pI)

38.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 53 6.3e-07 F-box domain
LRR_At5g56370 PF24758 123 - 233 1.5e-10 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 438, 966
AarI CACCTGC 1 cut(s) 952
Acc36I ACCTGC 1 cut(s) 952
AccB7I CCANNNNNTGG 1 cut(s) 227
AccI GTMKAC 2 cut(s) 1016, 1326
AclWI GGATC 1 cut(s) 1322
AcsI RAATTY 1 cut(s) 62
AcuI CTGAAG 1 cut(s) 749
AfaI GTAC 4 cut(s) 642, 867, 1008, 1288
AfiI CCNNNNNNNGG 3 cut(s) 227, 463, 551
AflII CTTAAG 1 cut(s) 1001
AflIII ACRYGT 2 cut(s) 927, 1009
AgsI TTSAA 8 cut(s) 23, 410, 511, 593, 647, 703, 815, 1078
AjiI CACGTC 1 cut(s) 1211
AjnI CCWGG 3 cut(s) 226, 873, 1256
AluBI AGCT 4 cut(s) 622, 698, 811, 1081
AluI AGCT 4 cut(s) 622, 698, 811, 1081
Alw21I GWGCWC 2 cut(s) 352, 494
Alw26I GTCTC 4 cut(s) 364, 572, 718, 1354
Alw44I GTGCAC 1 cut(s) 490
AlwI GGATC 1 cut(s) 1322
AlwNI CAGNNNCTG 1 cut(s) 1336
Ama87I CYCGRG 1 cut(s) 1363
AoxI GGCC 1 cut(s) 454
ApaLI GTGCAC 1 cut(s) 490
ApoI RAATTY 1 cut(s) 62
ArsI GACNNNNNNTTYG 2 cut(s) 103, 135
AseI ATTAAT 1 cut(s) 798
Asp700I GAANNNNTTC 1 cut(s) 670
AspLEI GCGC 2 cut(s) 721, 949
AspS9I GGNCC 4 cut(s) 111, 455, 776, 1254
AsuHPI GGTGA 3 cut(s) 526, 782, 1128
AsuII TTCGAA 2 cut(s) 177, 1292
AvaI CYCGRG 1 cut(s) 1363
AvaII GGWCC 3 cut(s) 111, 776, 1254
BaeGI GKGCMC 1 cut(s) 494
BaeI ACNNNNGTAYC 2 cut(s) 998, 1031
BauI CACGAG 1 cut(s) 500
BbsI GAAGAC 1 cut(s) 323
Bbv12I GWGCWC 2 cut(s) 352, 494
BccI CCATC 3 cut(s) 126, 446, 767
BcgI CGANNNNNNTGC 2 cut(s) 481, 515
BciT130I CCWGG 3 cut(s) 228, 875, 1258
BcoDI GTCTC 4 cut(s) 364, 572, 718, 1354
BfaI CTAG 3 cut(s) 164, 372, 1154
BfmI CTRYAG 1 cut(s) 693
BfrI CTTAAG 1 cut(s) 1001
BfuAI ACCTGC 1 cut(s) 952
Bme1390I CCNGG 3 cut(s) 228, 875, 1258
Bme18I GGWCC 3 cut(s) 111, 776, 1254
BmeT110I CYCGRG 1 cut(s) 1363
BmgBI CACGTC 1 cut(s) 1211
BmgT120I GGNCC 4 cut(s) 111, 455, 776, 1254
BmiI GGNNCC 2 cut(s) 7, 957
BmrFI CCNGG 3 cut(s) 228, 875, 1258
BmrI ACTGGG 1 cut(s) 1114
BmsI GCATC 1 cut(s) 1274
BmuI ACTGGG 1 cut(s) 1114
BpiI GAAGAC 1 cut(s) 323
BpmI CTGGAG 1 cut(s) 974
Bpu10I CCTNAGC 1 cut(s) 351
Bpu14I TTCGAA 2 cut(s) 177, 1292
BpuEI CTTGAG 2 cut(s) 554, 585
Bsa29I ATCGAT 1 cut(s) 1268
BsaAI YACGTR 2 cut(s) 928, 1010
BsaI GGTCTC 1 cut(s) 718
BsaJI CCNNGG 3 cut(s) 283, 462, 873
BsaXI ACNNNNNCTCC 6 cut(s) 208, 238, 313, 343, 523, 553
Bsc4I CCNNNNNNNGG 3 cut(s) 227, 463, 551
Bse1I ACTGG 2 cut(s) 667, 1109
Bse3DI GCAATG 1 cut(s) 984
BseBI CCWGG 3 cut(s) 228, 875, 1258
BseCI ATCGAT 1 cut(s) 1268
BseDI CCNNGG 3 cut(s) 283, 462, 873
BseGI GGATG 2 cut(s) 361, 682
BseLI CCNNNNNNNGG 3 cut(s) 227, 463, 551
BseMI GCAATG 1 cut(s) 984
BseMII CTCAG 2 cut(s) 365, 1058
BseNI ACTGG 2 cut(s) 667, 1109
BseRI GAGGAG 1 cut(s) 531
BseSI GKGCMC 1 cut(s) 494
BshFI GGCC 1 cut(s) 456
BshVI ATCGAT 1 cut(s) 1268
BsiHKAI GWGCWC 2 cut(s) 352, 494
BsiHKCI CYCGRG 1 cut(s) 1363
BslFI GGGAC 2 cut(s) 140, 559
BslI CCNNNNNNNGG 3 cut(s) 227, 463, 551
BsmAI GTCTC 4 cut(s) 364, 572, 718, 1354
BsmFI GGGAC 2 cut(s) 140, 559
BsnI GGCC 1 cut(s) 456
Bso31I GGTCTC 1 cut(s) 718
BsoBI CYCGRG 1 cut(s) 1363
Bsp119I TTCGAA 2 cut(s) 177, 1292
Bsp1286I GDGCHC 2 cut(s) 352, 494
Bsp1407I TGTACA 1 cut(s) 865
Bsp143I GATC 5 cut(s) 265, 415, 744, 892, 1314
Bsp19I CCATGG 1 cut(s) 283
BspANI GGCC 1 cut(s) 456
BspCNI CTCAG 2 cut(s) 364, 1059
BspDI ATCGAT 1 cut(s) 1268
BspHI TCATGA 1 cut(s) 1373
BspLI GGNNCC 2 cut(s) 7, 957
BspMI ACCTGC 1 cut(s) 952
BspPI GGATC 1 cut(s) 1322
BspT104I TTCGAA 2 cut(s) 177, 1292
BspTI CTTAAG 1 cut(s) 1001
BspTNI GGTCTC 1 cut(s) 718
BsrDI GCAATG 1 cut(s) 984
BsrGI TGTACA 1 cut(s) 865
BsrI ACTGG 2 cut(s) 667, 1109
BssECI CCNNGG 3 cut(s) 283, 462, 873
BssMI GATC 5 cut(s) 265, 415, 744, 892, 1314
BssNAI GTATAC 1 cut(s) 1017
BssSI CACGAG 1 cut(s) 500
BssT1I CCWWGG 2 cut(s) 283, 462
Bst1107I GTATAC 1 cut(s) 1017
Bst2BI CACGAG 1 cut(s) 500
Bst2UI CCWGG 3 cut(s) 228, 875, 1258
Bst4CI ACNGT 2 cut(s) 186, 788
Bst6I CTCTTC 1 cut(s) 303
BstAFI CTTAAG 1 cut(s) 1001
BstAUI TGTACA 1 cut(s) 865
BstBAI YACGTR 2 cut(s) 928, 1010
BstBI TTCGAA 2 cut(s) 177, 1292
BstC8I GCNNGC 1 cut(s) 1053
BstDEI CTNAG 3 cut(s) 68, 351, 1067
BstDSI CCRYGG 1 cut(s) 283
BstF5I GGATG 2 cut(s) 361, 682
BstHHI GCGC 2 cut(s) 721, 949
BstKTI GATC 5 cut(s) 268, 418, 747, 895, 1317
BstMAI GTCTC 4 cut(s) 364, 572, 718, 1354
BstMBI GATC 5 cut(s) 265, 415, 744, 892, 1314
BstMWI GCNNNNNNNGC 2 cut(s) 197, 955
BstNI CCWGG 3 cut(s) 228, 875, 1258
BstNSI RCATGY 2 cut(s) 31, 941
BstSCI CCNGG 3 cut(s) 226, 873, 1256
BstSFI CTRYAG 1 cut(s) 693
BstSLI GKGCMC 1 cut(s) 494
BstV2I GAAGAC 1 cut(s) 323
BstZ17I GTATAC 1 cut(s) 1017
Bsu15I ATCGAT 1 cut(s) 1268
BsuRI GGCC 1 cut(s) 456
BsuTUI ATCGAT 1 cut(s) 1268
BtgI CCRYGG 1 cut(s) 283
BtrI CACGTC 1 cut(s) 1211
BtsCI GGATG 2 cut(s) 361, 682
BtsI GCAGTG 2 cut(s) 384, 892
BtsIMutI CAGTG 2 cut(s) 384, 892
BveI ACCTGC 1 cut(s) 952
Cac8I GCNNGC 1 cut(s) 1053
CaiI CAGNNNCTG 1 cut(s) 1336
CciI TCATGA 1 cut(s) 1373
CfoI GCGC 2 cut(s) 721, 949
Cfr13I GGNCC 4 cut(s) 111, 455, 776, 1254
ClaI ATCGAT 1 cut(s) 1268
CseI GACGC 1 cut(s) 317
Csp6I GTAC 4 cut(s) 641, 866, 1007, 1287
CspCI CAANNNNNGTGG 2 cut(s) 483, 518
CviJI RGCY 9 cut(s) 149, 200, 456, 555, 622, 698, 811, 958, 1081
CviKI_1 RGCY 9 cut(s) 149, 200, 456, 555, 622, 698, 811, 958, 1081
CviQI GTAC 4 cut(s) 641, 866, 1007, 1287
DdeI CTNAG 3 cut(s) 68, 351, 1067
DpnI GATC 5 cut(s) 267, 417, 746, 894, 1316
DpnII GATC 5 cut(s) 265, 415, 744, 892, 1314
Eam1104I CTCTTC 1 cut(s) 303
EarI CTCTTC 1 cut(s) 303
Eco130I CCWWGG 2 cut(s) 283, 462
Eco31I GGTCTC 1 cut(s) 718
Eco47I GGWCC 3 cut(s) 111, 776, 1254
Eco57I CTGAAG 1 cut(s) 749
Eco88I CYCGRG 1 cut(s) 1363
EcoRII CCWGG 3 cut(s) 226, 873, 1256
EcoT14I CCWWGG 2 cut(s) 283, 462
ErhI CCWWGG 2 cut(s) 283, 462
FaqI GGGAC 2 cut(s) 140, 559
FauNDI CATATG 1 cut(s) 535
FblI GTMKAC 2 cut(s) 1016, 1326
FokI GGATG 2 cut(s) 368, 689
FspBI CTAG 3 cut(s) 164, 372, 1154
GlaI GCGC 2 cut(s) 720, 948
GsuI CTGGAG 1 cut(s) 974
HaeIII GGCC 1 cut(s) 456
HgaI GACGC 1 cut(s) 317
HhaI GCGC 2 cut(s) 721, 949
Hin6I GCGC 2 cut(s) 719, 947
HinP1I GCGC 2 cut(s) 719, 947
HindIII AAGCTT 2 cut(s) 620, 809
HinfI GANTC 7 cut(s) 305, 379, 608, 836, 1148, 1282, 1333
HphI GGTGA 3 cut(s) 526, 782, 1128
Hpy166II GTNNAC 5 cut(s) 33, 50, 492, 1017, 1327
Hpy188I TCNGA 6 cut(s) 256, 313, 321, 676, 934, 1311
Hpy8I GTNNAC 5 cut(s) 33, 50, 492, 1017, 1327
Hpy99I CGWCG 1 cut(s) 1212
HpyAV CCTTC 1 cut(s) 98
HpyCH4III ACNGT 2 cut(s) 186, 788
HpyCH4IV ACGT 3 cut(s) 927, 1009, 1210
HpyCH4V TGCA 6 cut(s) 492, 941, 989, 1055, 1214, 1265
HpyF10VI GCNNNNNNNGC 2 cut(s) 197, 955
HpyF3I CTNAG 3 cut(s) 68, 351, 1067
HpySE526I ACGT 3 cut(s) 927, 1009, 1210
HspAI GCGC 2 cut(s) 719, 947
Kzo9I GATC 5 cut(s) 265, 415, 744, 892, 1314
LmnI GCTCC 2 cut(s) 544, 955
LweI GCATC 1 cut(s) 1274
MaeI CTAG 3 cut(s) 164, 372, 1154
MaeII ACGT 3 cut(s) 927, 1009, 1210
MaeIII GTNAC 2 cut(s) 302, 782
MalI GATC 5 cut(s) 267, 417, 746, 894, 1316
MboI GATC 5 cut(s) 265, 415, 744, 892, 1314
MboII GAAGA 8 cut(s) 148, 191, 290, 323, 410, 461, 742, 1181
MhlI GDGCHC 2 cut(s) 352, 494
MluCI AATT 9 cut(s) 62, 432, 523, 666, 922, 1073, 1198, 1215, 1343
MlyI GAGTC 3 cut(s) 299, 602, 830
MmeI TCCRAC 1 cut(s) 356
MnlI CCTC 8 cut(s) 267, 315, 552, 609, 1062, 1272, 1305, 1372
MroXI GAANNNNTTC 1 cut(s) 670
MseI TTAA 8 cut(s) 213, 426, 444, 708, 737, 798, 972, 1002
MslI CAYNNNNRTG 1 cut(s) 1170
MspCI CTTAAG 1 cut(s) 1001
MspR9I CCNGG 3 cut(s) 228, 875, 1258
MvaI CCWGG 3 cut(s) 228, 875, 1258
MwoI GCNNNNNNNGC 2 cut(s) 197, 955
NcoI CCATGG 1 cut(s) 283
NdeI CATATG 1 cut(s) 535
NdeII GATC 5 cut(s) 265, 415, 744, 892, 1314
NlaIV GGNNCC 2 cut(s) 7, 957
NmuCI GTSAC 1 cut(s) 302
NspI RCATGY 2 cut(s) 31, 941
NspV TTCGAA 2 cut(s) 177, 1292
PaeR7I CTCGAG 1 cut(s) 1363
PagI TCATGA 1 cut(s) 1373
PaqCI CACCTGC 1 cut(s) 952
PcsI WCGNNNNNNNCGW 2 cut(s) 325, 1274
PdmI GAANNNNTTC 1 cut(s) 670
PfeI GAWTC 4 cut(s) 379, 1148, 1282, 1333
PflMI CCANNNNNTGG 1 cut(s) 227
PleI GAGTC 3 cut(s) 299, 602, 830
PpsI GAGTC 3 cut(s) 299, 602, 830
Ppu21I YACGTR 2 cut(s) 928, 1010
PshBI ATTAAT 1 cut(s) 798
PsiI TTATAA 2 cut(s) 438, 966
Psp6I CCWGG 3 cut(s) 226, 873, 1256
PspGI CCWGG 3 cut(s) 226, 873, 1256
PspN4I GGNNCC 2 cut(s) 7, 957
PspPI GGNCC 4 cut(s) 111, 455, 776, 1254
PstNI CAGNNNCTG 1 cut(s) 1336
RsaI GTAC 4 cut(s) 642, 867, 1008, 1288
RsaNI GTAC 4 cut(s) 641, 866, 1007, 1287
RseI CAYNNNNRTG 1 cut(s) 1170
SaqAI TTAA 8 cut(s) 213, 426, 444, 708, 737, 798, 972, 1002
Sau3AI GATC 5 cut(s) 265, 415, 744, 892, 1314
Sau96I GGNCC 4 cut(s) 111, 455, 776, 1254
SchI GAGTC 3 cut(s) 299, 602, 830
ScrFI CCNGG 3 cut(s) 228, 875, 1258
SduI GDGCHC 2 cut(s) 352, 494
SfaNI GCATC 1 cut(s) 1274
SfcI CTRYAG 1 cut(s) 693
Sfr274I CTCGAG 1 cut(s) 1363
SfuI TTCGAA 2 cut(s) 177, 1292
SinI GGWCC 3 cut(s) 111, 776, 1254
SlaI CTCGAG 1 cut(s) 1363
SmiMI CAYNNNNRTG 1 cut(s) 1170
SmlI CTYRAG 4 cut(s) 569, 600, 1001, 1363
SmoI CTYRAG 4 cut(s) 569, 600, 1001, 1363
Sse9I AATT 9 cut(s) 62, 432, 523, 666, 922, 1073, 1198, 1215, 1343
SspI AATATT 1 cut(s) 143
SspMI CTAG 3 cut(s) 164, 372, 1154
StyD4I CCNGG 3 cut(s) 226, 873, 1256
StyI CCWWGG 2 cut(s) 283, 462
TaaI ACNGT 2 cut(s) 186, 788
TaiI ACGT 3 cut(s) 930, 1012, 1213
TaqI TCGA 5 cut(s) 73, 177, 1268, 1292, 1364
TasI AATT 9 cut(s) 62, 432, 523, 666, 922, 1073, 1198, 1215, 1343
TatI WGTACW 2 cut(s) 640, 865
TfiI GAWTC 4 cut(s) 379, 1148, 1282, 1333
Tru1I TTAA 8 cut(s) 213, 426, 444, 708, 737, 798, 972, 1002
Tru9I TTAA 8 cut(s) 213, 426, 444, 708, 737, 798, 972, 1002
TscAI CASTG 2 cut(s) 391, 892
TseFI GTSAC 1 cut(s) 302
Tsp45I GTSAC 1 cut(s) 302
TspRI CASTG 2 cut(s) 391, 892
Van91I CCANNNNNTGG 1 cut(s) 227
Vha464I CTTAAG 1 cut(s) 1001
VneI GTGCAC 1 cut(s) 490
VpaK11BI GGWCC 3 cut(s) 111, 776, 1254
VspI ATTAAT 1 cut(s) 798
XapI RAATTY 1 cut(s) 62
XceI RCATGY 2 cut(s) 31, 941
XhoI CTCGAG 1 cut(s) 1363
XmiI GTMKAC 2 cut(s) 1016, 1326
XmnI GAANNNNTTC 1 cut(s) 670
XspI CTAG 3 cut(s) 164, 372, 1154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.