AT1G13780

response to UV-B

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000062
Physical Location & Seq
Forward (+)
4724544 .. 4726558
2015 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G13780.2

Sequence Viewer

Length: 1371 bp
ATGGAATCCACGGTCATGCCTGGGTTTGATAGAATTAGCGAATTGCCGGAATCTTTGATTAGTCAAATACTGTTACACCTTCCGACTAAAGCTTCTGTGAAGACGAGTGTTTTATCGACTAGATGGAAGAATCTATGGCTTAATGTTCCCGGACTTGATTTGAACTGCCGTGATTTCCCCTTTCAGAACAACAACGAAAAACTGTTGATTGATTTCATTGACAGATTTCTCCAGTTTAACAATGAGTCACGTCTTCAAAAATTCAAGGTAGATTACAGTAGAGATAAGATCATTAAGTTCTCGGATCGGATTGGTGACGCGATTAGCCGCGGGATTCGAGTTTTAGATGTTGAGAGCAATACCTATTATCGAGATGCTGATGATTGCATTGACTATCCTTGTATCGAGTTCATGCCTCTGAATCTTTATTCGTGTAAGACATTGGTTTCTTTGAAGCTTTCGTATTCGGGTCTTGAGGATCCAGGGTTTGTCTATTTGCCTTGTCTCAAATTCATGCATCTTCGAGAAGTTCGATGGGATAGTAGTGGTACTATGAATCTGGAGAAGCTTGTTTCAGGTTGTCCTGTTCTTGAAGAACTGATTTATCTTCATGATGATAAATTGGTGGTTACGCGTGTGAGATCTCGAAGCTTGAAGAGGTTTTCTATTCCGTTTAGGCATAAACTTTCTTTGTTTAGGAGAGTGACACAGACATTTGAGATTGATGCTCCTGGACTAGAGTATATGAGTCTTAAAGCAGACCATTTCGATAGAATCGTGGTAAAGAACCTTACTTCTTTATTCATGATTGACCTTGATATCAAATTCATTGTCGGGTTTGGCTGGATGTTTGATCCGGAGGACTTACCAAAGAGAAATGAAATCCGTGATTTTCTCACCGGGATATCTAGTGTAAGACATATGGTCATCTCTCATAATACAGTGAAGGCCCTTGATCTTTACTCAAAAGTAGGACTGATTCCCAAATTCAATAACTTATCCCGTGTAGAGGCTGCGTTCCCGAGCTCCTTGTTACAGTTTTTGCCAGCCTTTCTTGAGAGCTTCCCGAATCTGAAACACTTAATCTTGGAAACTGAATGTCCAGTGGAGGTGATGGAGAAGTTTGAACTCGTAAATGTGCCTCGGTGTTTCGTATCGACTCTTGAACATGTTGAGATAAAAGGATTGTTTGACTGGGGGGAACAGGATATGAAAATAGCGAGTTACTTTCTCGAAAACTCAGCAGTCCTCAAGAAACTGATTCTGAGTTTCATGGGTTGTCCTCAACATTATTCGGAATCAGATATCTACGAGGAACTTAATAAACTCACAAAACGTTCTCCGAGATGTCAAATTATCATTAGATGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF647

Protein Analysis

456

Amino Acids

53.0

Weight (kDa)

6.58

Isoelectric Point (pI)

48.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 12 - 49 8.8e-07 F-box domain
LRR_At5g56370 PF24758 136 - 251 2.2e-09 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 3 cut(s) 320, 330, 634
AccIII TCCGGA 1 cut(s) 856
AciI CCGC 2 cut(s) 328, 330
AclI AACGTT 1 cut(s) 1336
AclWI GGATC 4 cut(s) 312, 473, 486, 848
AcsI RAATTY 4 cut(s) 260, 509, 824, 986
AfaI GTAC 1 cut(s) 550
AfiI CCNNNNNNNGG 1 cut(s) 1009
AflIII ACRYGT 2 cut(s) 632, 1168
AgsI TTSAA 9 cut(s) 163, 257, 265, 454, 593, 655, 991, 1127, 1166
AhdI GACNNNNNGTC 1 cut(s) 923
AjiI CACGTC 1 cut(s) 251
AjnI CCWGG 3 cut(s) 19, 481, 730
AluBI AGCT 6 cut(s) 92, 457, 568, 651, 1026, 1062
AluI AGCT 6 cut(s) 92, 457, 568, 651, 1026, 1062
Alw21I GWGCWC 1 cut(s) 1028
Alw26I GTCTC 1 cut(s) 509
AlwI GGATC 4 cut(s) 312, 473, 486, 848
Ama87I CYCGRG 1 cut(s) 1021
Aor13HI TCCGGA 1 cut(s) 856
AoxI GGCC 1 cut(s) 948
ApeKI GCWGC 1 cut(s) 1013
ApoI RAATTY 4 cut(s) 260, 509, 824, 986
ArsI GACNNNNNNTTYG 2 cut(s) 816, 848
AspS9I GGNCC 1 cut(s) 949
AsuC2I CCSGG 2 cut(s) 150, 901
AsuHPI GGTGA 3 cut(s) 326, 889, 1123
AvaI CYCGRG 1 cut(s) 1021
BamHI GGATCC 1 cut(s) 478
BanII GRGCYC 1 cut(s) 1028
BbsI GAAGAC 2 cut(s) 107, 245
Bbv12I GWGCWC 1 cut(s) 1028
BbvI GCAGC 1 cut(s) 1000
BccI CCATC 3 cut(s) 117, 528, 1108
BceAI ACGGC 1 cut(s) 153
BciT130I CCWGG 3 cut(s) 21, 483, 732
BcnI CCSGG 2 cut(s) 150, 901
BcoDI GTCTC 1 cut(s) 509
BfaI CTAG 3 cut(s) 120, 737, 909
BglII AGATCT 1 cut(s) 641
BisI GCNGC 2 cut(s) 328, 1014
BlsI GCNGC 2 cut(s) 329, 1015
Bme1390I CCNGG 5 cut(s) 21, 150, 483, 732, 901
BmeRI GACNNNNNGTC 1 cut(s) 923
BmeT110I CYCGRG 1 cut(s) 1021
BmgBI CACGTC 1 cut(s) 251
BmgT120I GGNCC 1 cut(s) 949
BmiI GGNNCC 1 cut(s) 480
BmrFI CCNGG 5 cut(s) 21, 150, 483, 732, 901
BmrI ACTGGG 1 cut(s) 1204
BmsI GCATC 4 cut(s) 364, 526, 715, 1355
BmuI ACTGGG 1 cut(s) 1204
BpiI GAAGAC 2 cut(s) 107, 245
BpmI CTGGAG 2 cut(s) 215, 581
BpuEI CTTGAG 3 cut(s) 494, 1076, 1235
BpuMI CCSGG 2 cut(s) 150, 901
BsaJI CCNNGG 5 cut(s) 9, 20, 328, 482, 1142
BsaWI WCCGGW 1 cut(s) 856
Bsc4I CCNNNNNNNGG 1 cut(s) 1009
Bse1I ACTGG 3 cut(s) 232, 1103, 1199
BseAI TCCGGA 1 cut(s) 856
BseBI CCWGG 3 cut(s) 21, 483, 732
BseDI CCNNGG 5 cut(s) 9, 20, 328, 482, 1142
BseGI GGATG 1 cut(s) 852
BseLI CCNNNNNNNGG 1 cut(s) 1009
BseMII CTCAG 2 cut(s) 1254, 1256
BseNI ACTGG 3 cut(s) 232, 1103, 1199
BseXI GCAGC 1 cut(s) 1000
Bsh1236I CGCG 3 cut(s) 320, 330, 634
BshFI GGCC 1 cut(s) 950
BsiHKAI GWGCWC 1 cut(s) 1028
BsiHKCI CYCGRG 1 cut(s) 1021
BsiSI CCGG 4 cut(s) 47, 150, 857, 900
BslI CCNNNNNNNGG 1 cut(s) 1009
BsmAI GTCTC 1 cut(s) 509
BsnI GGCC 1 cut(s) 950
BsoBI CYCGRG 1 cut(s) 1021
Bsp1286I GDGCHC 1 cut(s) 1028
Bsp13I TCCGGA 1 cut(s) 856
Bsp143I GATC 6 cut(s) 288, 304, 478, 641, 853, 955
BspACI CCGC 2 cut(s) 328, 330
BspANI GGCC 1 cut(s) 950
BspCNI CTCAG 2 cut(s) 1253, 1257
BspEI TCCGGA 1 cut(s) 856
BspFNI CGCG 3 cut(s) 320, 330, 634
BspHI TCATGA 2 cut(s) 610, 804
BspLI GGNNCC 1 cut(s) 480
BspPI GGATC 4 cut(s) 312, 473, 486, 848
BsrI ACTGG 3 cut(s) 232, 1103, 1199
BssECI CCNNGG 5 cut(s) 9, 20, 328, 482, 1142
BssMI GATC 6 cut(s) 288, 304, 478, 641, 853, 955
Bst2UI CCWGG 3 cut(s) 21, 483, 732
Bst4CI ACNGT 6 cut(s) 13, 72, 204, 278, 943, 1038
Bst6I CTCTTC 1 cut(s) 650
BstC8I GCNNGC 1 cut(s) 1047
BstDEI CTNAG 2 cut(s) 1240, 1265
BstDSI CCRYGG 2 cut(s) 9, 328
BstF5I GGATG 1 cut(s) 852
BstFNI CGCG 3 cut(s) 320, 330, 634
BstKTI GATC 6 cut(s) 291, 307, 481, 644, 856, 958
BstMAI GTCTC 1 cut(s) 509
BstMBI GATC 6 cut(s) 288, 304, 478, 641, 853, 955
BstNI CCWGG 3 cut(s) 21, 483, 732
BstNSI RCATGY 1 cut(s) 1172
BstSCI CCNGG 5 cut(s) 19, 148, 481, 730, 899
BstUI CGCG 3 cut(s) 320, 330, 634
BstV1I GCAGC 1 cut(s) 1000
BstV2I GAAGAC 2 cut(s) 107, 245
BstX2I RGATCY 2 cut(s) 478, 641
BstYI RGATCY 2 cut(s) 478, 641
BsuRI GGCC 1 cut(s) 950
BtgI CCRYGG 2 cut(s) 9, 328
BtrI CACGTC 1 cut(s) 251
BtsCI GGATG 1 cut(s) 852
BtsIMutI CAGTG 2 cut(s) 948, 1110
Cac8I GCNNGC 1 cut(s) 1047
CciI TCATGA 2 cut(s) 610, 804
Cfr13I GGNCC 1 cut(s) 949
Cfr42I CCGCGG 1 cut(s) 331
CseI GACGC 1 cut(s) 326
Csp6I GTAC 1 cut(s) 549
CviAII CATG 7 cut(s) 16, 412, 514, 611, 805, 1169, 1273
CviQI GTAC 1 cut(s) 549
DdeI CTNAG 2 cut(s) 1240, 1265
DpnI GATC 6 cut(s) 290, 306, 480, 643, 855, 957
DpnII GATC 6 cut(s) 288, 304, 478, 641, 853, 955
DriI GACNNNNNGTC 1 cut(s) 923
Eam1104I CTCTTC 1 cut(s) 650
Eam1105I GACNNNNNGTC 1 cut(s) 923
EarI CTCTTC 1 cut(s) 650
Ecl136II GAGCTC 1 cut(s) 1026
Eco24I GRGCYC 1 cut(s) 1028
Eco32I GATATC 3 cut(s) 820, 906, 1306
Eco53kI GAGCTC 1 cut(s) 1026
Eco88I CYCGRG 1 cut(s) 1021
EcoICRI GAGCTC 1 cut(s) 1026
EcoO109I RGGNCCY 1 cut(s) 949
EcoRII CCWGG 3 cut(s) 19, 481, 730
EcoRV GATATC 3 cut(s) 820, 906, 1306
EcoT22I ATGCAT 1 cut(s) 519
EcoT38I GRGCYC 1 cut(s) 1028
FaeI CATG 7 cut(s) 19, 415, 517, 614, 808, 1172, 1276
FatI CATG 7 cut(s) 15, 411, 513, 610, 804, 1168, 1272
FauI CCCGC 1 cut(s) 323
FauNDI CATATG 1 cut(s) 921
Fnu4HI GCNGC 2 cut(s) 328, 1014
FokI GGATG 1 cut(s) 859
FriOI GRGCYC 1 cut(s) 1028
Fsp4HI GCNGC 2 cut(s) 328, 1014
FspBI CTAG 3 cut(s) 120, 737, 909
GluI GCNGC 2 cut(s) 328, 1014
GsuI CTGGAG 2 cut(s) 215, 581
HaeIII GGCC 1 cut(s) 950
HapII CCGG 4 cut(s) 47, 150, 857, 900
HgaI GACGC 1 cut(s) 326
Hin1II CATG 7 cut(s) 19, 415, 517, 614, 808, 1172, 1276
HindIII AAGCTT 4 cut(s) 90, 455, 566, 649
HpaII CCGG 4 cut(s) 47, 150, 857, 900
HphI GGTGA 3 cut(s) 326, 889, 1123
HpyAV CCTTC 2 cut(s) 89, 940
HpyCH4III ACNGT 6 cut(s) 13, 72, 204, 278, 943, 1038
HpyCH4IV ACGT 2 cut(s) 250, 1336
HpyCH4V TGCA 2 cut(s) 387, 517
HpyF3I CTNAG 2 cut(s) 1240, 1265
HpySE526I ACGT 2 cut(s) 250, 1336
Hsp92II CATG 7 cut(s) 19, 415, 517, 614, 808, 1172, 1276
Kpn2I TCCGGA 1 cut(s) 856
KspI CCGCGG 1 cut(s) 331
Kzo9I GATC 6 cut(s) 288, 304, 478, 641, 853, 955
LmnI GCTCC 2 cut(s) 733, 1031
Lsp1109I GCAGC 1 cut(s) 1000
LweI GCATC 4 cut(s) 364, 526, 715, 1355
MaeI CTAG 3 cut(s) 120, 737, 909
MaeII ACGT 2 cut(s) 250, 1336
MaeIII GTNAC 7 cut(s) 72, 246, 314, 628, 703, 1032, 1223
MalI GATC 6 cut(s) 290, 306, 480, 643, 855, 957
MboI GATC 6 cut(s) 288, 304, 478, 641, 853, 955
MboII GAAGA 7 cut(s) 112, 139, 245, 512, 599, 605, 667
MflI RGATCY 2 cut(s) 478, 641
MhlI GDGCHC 1 cut(s) 1028
MluCI AATT 8 cut(s) 33, 41, 260, 509, 620, 824, 986, 1353
MluI ACGCGT 1 cut(s) 632
MlyI GAGTC 3 cut(s) 254, 757, 1153
MmeI TCCRAC 1 cut(s) 107
Mph1103I ATGCAT 1 cut(s) 519
MroI TCCGGA 1 cut(s) 856
MseI TTAA 6 cut(s) 141, 237, 294, 753, 1082, 1320
MslI CAYNNNNRTG 1 cut(s) 14
MspA1I CMGCKG 1 cut(s) 330
MspI CCGG 4 cut(s) 47, 150, 857, 900
MspR9I CCNGG 5 cut(s) 21, 150, 483, 732, 901
MvaI CCWGG 3 cut(s) 21, 483, 732
MvnI CGCG 3 cut(s) 320, 330, 634
NciI CCSGG 2 cut(s) 150, 901
NdeI CATATG 1 cut(s) 921
NdeII GATC 6 cut(s) 288, 304, 478, 641, 853, 955
NlaIII CATG 7 cut(s) 19, 415, 517, 614, 808, 1172, 1276
NlaIV GGNNCC 1 cut(s) 480
NmuCI GTSAC 3 cut(s) 246, 314, 703
NsiI ATGCAT 1 cut(s) 519
NspI RCATGY 1 cut(s) 1172
PagI TCATGA 2 cut(s) 610, 804
PciI ACATGT 1 cut(s) 1168
PcsI WCGNNNNNNNCGW 2 cut(s) 529, 774
PfoI TCCNGGA 2 cut(s) 148, 730
PkrI GCNGC 2 cut(s) 329, 1015
PleI GAGTC 3 cut(s) 253, 756, 1153
PpsI GAGTC 3 cut(s) 253, 756, 1153
PscI ACATGT 1 cut(s) 1168
Psp124BI GAGCTC 1 cut(s) 1028
Psp1406I AACGTT 1 cut(s) 1336
Psp6I CCWGG 3 cut(s) 19, 481, 730
PspGI CCWGG 3 cut(s) 19, 481, 730
PspN4I GGNNCC 1 cut(s) 480
PspPI GGNCC 1 cut(s) 949
PsuI RGATCY 2 cut(s) 478, 641
RsaI GTAC 1 cut(s) 550
RsaNI GTAC 1 cut(s) 549
RseI CAYNNNNRTG 1 cut(s) 14
SacI GAGCTC 1 cut(s) 1028
SacII CCGCGG 1 cut(s) 331
SaqAI TTAA 6 cut(s) 141, 237, 294, 753, 1082, 1320
SatI GCNGC 2 cut(s) 328, 1014
Sau3AI GATC 6 cut(s) 288, 304, 478, 641, 853, 955
Sau96I GGNCC 1 cut(s) 949
SchI GAGTC 3 cut(s) 254, 757, 1153
ScrFI CCNGG 5 cut(s) 21, 150, 483, 732, 901
SduI GDGCHC 1 cut(s) 1028
SfaNI GCATC 4 cut(s) 364, 526, 715, 1355
Sfr303I CCGCGG 1 cut(s) 331
SgrBI CCGCGG 1 cut(s) 331
SmiMI CAYNNNNRTG 1 cut(s) 14
SmlI CTYRAG 3 cut(s) 473, 1055, 1250
SmoI CTYRAG 3 cut(s) 473, 1055, 1250
Sse9I AATT 8 cut(s) 33, 41, 260, 509, 620, 824, 986, 1353
SsiI CCGC 2 cut(s) 328, 330
SspMI CTAG 3 cut(s) 120, 737, 909
SstI GAGCTC 1 cut(s) 1028
StyD4I CCNGG 5 cut(s) 19, 148, 481, 730, 899
TaaI ACNGT 6 cut(s) 13, 72, 204, 278, 943, 1038
TaiI ACGT 2 cut(s) 253, 1339
TasI AATT 8 cut(s) 33, 41, 260, 509, 620, 824, 986, 1353
TauI GCSGC 1 cut(s) 330
Tru1I TTAA 6 cut(s) 141, 237, 294, 753, 1082, 1320
Tru9I TTAA 6 cut(s) 141, 237, 294, 753, 1082, 1320
TscAI CASTG 2 cut(s) 948, 1110
TseFI GTSAC 3 cut(s) 246, 314, 703
TseI GCWGC 1 cut(s) 1013
Tsp45I GTSAC 3 cut(s) 246, 314, 703
TspGWI ACGGA 2 cut(s) 660, 875
TspRI CASTG 2 cut(s) 948, 1110
XapI RAATTY 4 cut(s) 260, 509, 824, 986
XceI RCATGY 1 cut(s) 1172
XspI CTAG 3 cut(s) 120, 737, 909
Zsp2I ATGCAT 1 cut(s) 519
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.