FvH4_3g17100

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000062
Physical Location & Seq
Forward (+)
10819460 .. 10822461
3002 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g17100.t1

Sequence Viewer

Length: 1473 bp
ATGACCTCACAAGGACAAATGAATTTGAAGTCAAAGCGGCGGATGAGAGTTCGAGATAGGATCAGTGGGTTACCAGATGCACTTCTTTGCCACATACTTTCGTTTCTTGAGACAAAATATGCTGTGAGGACGTGCGTTCTGTCTAGAAGATGGAAGAACATATGGGCATCTGTTACTACTCTATACTTTGACCAGAGATGTTTTCATGACTTTCATAAGTTTTGGGCATTTGTTGATTATGTACTTCTCTTCCGTTACTCATCAAACATCAAGATATTTCGGCTTTGTTTGAGGGGTGATGATGTGGACCACACTCGTATTACTGCTTGGATCAACACTGCCATTAGGCGCGGCGTTGTTGAACTGAGTCTCCTTGCTGGTCATCCAGTTTGGTCTGAGCTTATTGAGTTGCCTAAAAGCCTCTTCATGTGCAAAACACTGGTGACCTTGAAGTTGGGATCACAATTTATTACCAATATTCCTACATCAGGGTGTTTCCCGAATCTGAAGTCCCTCCAGCTTACATTTTATTCAGATGCTATTCCGTCAATGCGCAAGGTTATCTCCAACTGTCCGATACTTGAAGATTTGACTGTGGGTGGTTTTATTCGATCTGGTGCTGATACCTTGAATTTAAACATTGCTTCCCCTGCACTGAAGATACTAAGAATATATGTTGAGAACGATGGTACTGATGGCAATCGCTATCTTTTTAGTTGCCCAAAGCTTGAATATCTTGATTTGGCAGAGGATGTTTCGTCAATGTATTATTGGGGGAAAGCCAAATCCCTAGTCAAAGGCAGTATTTGTCTATTTCAGCATTGCTCAAATGAACACCCTAGTTTTTACTGCGTGACTGCGCTTTTGGCAGGAATATCCAATGTCACAGATTTATGTCTTTCAGCTCATTGTTTTGGGGTTGGTTCTCTACCTGTTTATGAAAATTTGAGACAATTGAAGCTGGTGATTCGAGATTGCTTTTGCTGGGAGTTGCTCACAGAATTACTCAAAAGATCACCTATCTTGGAGTCTCTCATCTTAGAACGTGAAGTTGCCGGTTGTCTTCAAGAACACTCTGATCATGATGAAGGGTCACAGTGTGATAAAAACTCCGAGAGTGAAGAGGTTTCTGAGCATGAAGAGGACTCAGACGATGAAGAGGGGTCGGATAGTGAACAAAGGTCAGATCATGATGACGGGCCAGTGAATGAACAAGGGTCAGATCATCAATGGAATCCTCCAGATTGTGTGCCAAAATGTTGTTTGTTACACCTCAAGATTGTCTCCATAGAGGGATTCACGAGAAACCGCAATGAGTTGGAAGTGGCAAAGTACTTGCTGAAGTATGGTCAAGTTTTGAATAAGATGACTATATCTATGGATGATCTTGATGTGAATGAAAAAGAGAAGATTTATAAGGAGATTTTGATGGTTCCAAGGGGTTCAAGAACTAGTATAGTTAAATTCATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

491

Amino Acids

55.9

Weight (kDa)

5.91

Isoelectric Point (pI)

46.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 21 - 58 7.9e-09 F-box domain
LRR_At1g61320_AtMIF1 PF23622 89 - 379 5.3e-08 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 108 - 249 9.7e-15 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 414 - 458 3e-13 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1416
Acc16I TGCGCA 1 cut(s) 554
AccII CGCG 1 cut(s) 351
AciI CCGC 4 cut(s) 37, 40, 351, 1309
AclWI GGATC 3 cut(s) 68, 338, 466
AcsI RAATTY 4 cut(s) 22, 631, 943, 1463
AcuI CTGAAG 3 cut(s) 527, 677, 1361
AdeI CACNNNGTG 1 cut(s) 1100
AfaI GTAC 3 cut(s) 243, 691, 1334
AfiI CCNNNNNNNGG 1 cut(s) 488
AhlI ACTAGT 1 cut(s) 1451
AjiI CACGTC 1 cut(s) 132
AloI GAACNNNNNNTCC 2 cut(s) 354, 386
AluBI AGCT 5 cut(s) 400, 520, 727, 905, 961
AluI AGCT 5 cut(s) 400, 520, 727, 905, 961
Alw26I GTCTC 5 cut(s) 104, 374, 943, 1035, 1288
AlwI GGATC 3 cut(s) 68, 338, 466
AoxI GGCC 1 cut(s) 1199
ApoI RAATTY 4 cut(s) 22, 631, 943, 1463
ArsI GACNNNNNNTTYG 6 cut(s) 494, 526, 777, 809, 847, 879
AspLEI GCGC 3 cut(s) 351, 555, 862
AspS9I GGNCC 2 cut(s) 307, 1199
AsuHPI GGTGA 4 cut(s) 308, 454, 976, 1008
AvaII GGWCC 1 cut(s) 307
BauI CACGAG 1 cut(s) 1300
BbsI GAAGAC 1 cut(s) 1055
BccI CCATC 4 cut(s) 144, 680, 689, 1423
BclI TGATCA 1 cut(s) 1078
BcoDI GTCTC 5 cut(s) 104, 374, 943, 1035, 1288
BcuI ACTAGT 1 cut(s) 1451
BfaI CTAG 5 cut(s) 144, 791, 840, 1452, 1471
BisI GCNGC 2 cut(s) 38, 352
BlsI GCNGC 2 cut(s) 39, 353
BmcAI AGTACT 1 cut(s) 1334
Bme18I GGWCC 1 cut(s) 307
BmgBI CACGTC 1 cut(s) 132
BmgT120I GGNCC 2 cut(s) 307, 1199
BmiI GGNNCC 1 cut(s) 1434
BmsI GCATC 3 cut(s) 67, 176, 526
BpiI GAAGAC 1 cut(s) 1055
BpmI CTGGAG 2 cut(s) 500, 1224
BpuEI CTTGAG 2 cut(s) 128, 1259
BsaBI GATNNNNATC 1 cut(s) 699
BsaJI CCNNGG 1 cut(s) 1436
BsaXI ACNNNNNCTCC 2 cut(s) 354, 384
Bsc4I CCNNNNNNNGG 1 cut(s) 488
Bse118I RCCGGY 1 cut(s) 1055
Bse1I ACTGG 3 cut(s) 386, 444, 1202
Bse3DI GCAATG 3 cut(s) 639, 820, 1318
Bse8I GATNNNNATC 1 cut(s) 699
BseDI CCNNGG 1 cut(s) 1436
BseGI GGATG 4 cut(s) 48, 382, 757, 1387
BseJI GATNNNNATC 1 cut(s) 699
BseLI CCNNNNNNNGG 1 cut(s) 488
BseMI GCAATG 3 cut(s) 639, 820, 1318
BseMII CTCAG 4 cut(s) 356, 387, 1122, 1161
BseNI ACTGG 3 cut(s) 386, 444, 1202
BseYI CCCAGC 1 cut(s) 984
BsgI GTGCAG 1 cut(s) 636
Bsh1236I CGCG 1 cut(s) 351
BshFI GGCC 1 cut(s) 1201
BsiSI CCGG 1 cut(s) 1056
BslFI GGGAC 1 cut(s) 496
BslI CCNNNNNNNGG 1 cut(s) 488
BsmAI GTCTC 5 cut(s) 104, 374, 943, 1035, 1288
BsmFI GGGAC 1 cut(s) 496
BsnI GGCC 1 cut(s) 1201
Bsp143I GATC 9 cut(s) 60, 330, 458, 611, 1013, 1078, 1186, 1222, 1384
BspACI CCGC 4 cut(s) 37, 40, 351, 1309
BspANI GGCC 1 cut(s) 1201
BspCNI CTCAG 4 cut(s) 357, 388, 1123, 1160
BspFNI CGCG 1 cut(s) 351
BspHI TCATGA 3 cut(s) 205, 1081, 1189
BspLI GGNNCC 1 cut(s) 1434
BspPI GGATC 3 cut(s) 68, 338, 466
BsrDI GCAATG 3 cut(s) 639, 820, 1318
BsrFI RCCGGY 1 cut(s) 1055
BsrI ACTGG 3 cut(s) 386, 444, 1202
BssAI RCCGGY 1 cut(s) 1055
BssECI CCNNGG 1 cut(s) 1436
BssMI GATC 9 cut(s) 60, 330, 458, 611, 1013, 1078, 1186, 1222, 1384
BssSI CACGAG 1 cut(s) 1300
BssT1I CCWWGG 1 cut(s) 1436
Bst2BI CACGAG 1 cut(s) 1300
Bst4CI ACNGT 3 cut(s) 572, 595, 1098
Bst6I CTCTTC 5 cut(s) 254, 428, 1116, 1134, 1152
BstDEI CTNAG 6 cut(s) 365, 396, 665, 1039, 1131, 1147
BstEII GGTNACC 2 cut(s) 69, 442
BstENI CCTNNNNNAGG 1 cut(s) 486
BstF5I GGATG 4 cut(s) 48, 382, 757, 1387
BstFNI CGCG 1 cut(s) 351
BstHHI GCGC 3 cut(s) 351, 555, 862
BstKTI GATC 9 cut(s) 63, 333, 461, 614, 1016, 1081, 1189, 1225, 1387
BstMAI GTCTC 5 cut(s) 104, 374, 943, 1035, 1288
BstMBI GATC 9 cut(s) 60, 330, 458, 611, 1013, 1078, 1186, 1222, 1384
BstMWI GCNNNNNNNGC 2 cut(s) 650, 866
BstPI GGTNACC 2 cut(s) 69, 442
BstUI CGCG 1 cut(s) 351
BstV2I GAAGAC 1 cut(s) 1055
BsuRI GGCC 1 cut(s) 1201
BtrI CACGTC 1 cut(s) 132
BtsCI GGATG 4 cut(s) 48, 382, 757, 1387
BtsI GCAGTG 1 cut(s) 336
BtsIMutI CAGTG 6 cut(s) 70, 336, 437, 653, 1103, 1209
CciI TCATGA 3 cut(s) 205, 1081, 1189
CfoI GCGC 3 cut(s) 351, 555, 862
Cfr10I RCCGGY 1 cut(s) 1055
Cfr13I GGNCC 2 cut(s) 307, 1199
Csp6I GTAC 3 cut(s) 242, 690, 1333
CviAII CATG 5 cut(s) 206, 427, 1082, 1136, 1190
CviJI RGCY 9 cut(s) 283, 400, 420, 520, 727, 782, 905, 961, 1201
CviKI_1 RGCY 9 cut(s) 283, 400, 420, 520, 727, 782, 905, 961, 1201
CviQI GTAC 3 cut(s) 242, 690, 1333
DdeI CTNAG 6 cut(s) 365, 396, 665, 1039, 1131, 1147
DpnI GATC 9 cut(s) 62, 332, 460, 613, 1015, 1080, 1188, 1224, 1386
DpnII GATC 9 cut(s) 60, 330, 458, 611, 1013, 1078, 1186, 1222, 1384
DraI TTTAAA 1 cut(s) 636
DraIII CACNNNGTG 1 cut(s) 1100
Eam1104I CTCTTC 5 cut(s) 254, 428, 1116, 1134, 1152
EarI CTCTTC 5 cut(s) 254, 428, 1116, 1134, 1152
EciI GGCGGA 1 cut(s) 55
Eco130I CCWWGG 1 cut(s) 1436
Eco47I GGWCC 1 cut(s) 307
Eco57I CTGAAG 3 cut(s) 527, 677, 1361
Eco91I GGTNACC 2 cut(s) 69, 442
EcoNI CCTNNNNNAGG 1 cut(s) 486
EcoO65I GGTNACC 2 cut(s) 69, 442
EcoT14I CCWWGG 1 cut(s) 1436
ErhI CCWWGG 1 cut(s) 1436
FaeI CATG 5 cut(s) 209, 430, 1085, 1139, 1193
FaqI GGGAC 1 cut(s) 496
FatI CATG 5 cut(s) 205, 426, 1081, 1135, 1189
FauNDI CATATG 1 cut(s) 161
FbaI TGATCA 1 cut(s) 1078
Fnu4HI GCNGC 2 cut(s) 38, 352
FokI GGATG 4 cut(s) 55, 369, 764, 1394
Fsp4HI GCNGC 2 cut(s) 38, 352
FspBI CTAG 5 cut(s) 144, 791, 840, 1452, 1471
FspI TGCGCA 1 cut(s) 554
GlaI GCGC 3 cut(s) 350, 554, 861
GluI GCNGC 2 cut(s) 38, 352
GsaI CCCAGC 1 cut(s) 988
GsuI CTGGAG 2 cut(s) 500, 1224
HaeIII GGCC 1 cut(s) 1201
HapII CCGG 1 cut(s) 1056
HhaI GCGC 3 cut(s) 351, 555, 862
Hin1II CATG 5 cut(s) 209, 430, 1085, 1139, 1193
Hin6I GCGC 3 cut(s) 349, 553, 860
HinP1I GCGC 3 cut(s) 349, 553, 860
HindIII AAGCTT 1 cut(s) 725
HinfI GANTC 7 cut(s) 367, 502, 967, 1028, 1145, 1234, 1296
HpaII CCGG 1 cut(s) 1056
HphI GGTGA 4 cut(s) 308, 454, 976, 1008
Hpy166II GTNNAC 2 cut(s) 307, 1175
Hpy8I GTNNAC 2 cut(s) 307, 1175
HpyAV CCTTC 1 cut(s) 1082
HpyCH4III ACNGT 3 cut(s) 572, 595, 1098
HpyCH4IV ACGT 2 cut(s) 131, 1045
HpyCH4V TGCA 3 cut(s) 80, 432, 653
HpyF10VI GCNNNNNNNGC 2 cut(s) 650, 866
HpyF3I CTNAG 6 cut(s) 365, 396, 665, 1039, 1131, 1147
HpySE526I ACGT 2 cut(s) 131, 1045
Hsp92II CATG 5 cut(s) 209, 430, 1085, 1139, 1193
HspAI GCGC 3 cut(s) 349, 553, 860
Ksp22I TGATCA 1 cut(s) 1078
Kzo9I GATC 9 cut(s) 60, 330, 458, 611, 1013, 1078, 1186, 1222, 1384
LweI GCATC 3 cut(s) 67, 176, 526
MaeI CTAG 5 cut(s) 144, 791, 840, 1452, 1471
MaeII ACGT 2 cut(s) 131, 1045
MaeIII GTNAC 8 cut(s) 69, 172, 254, 442, 853, 883, 1092, 1266
MalI GATC 9 cut(s) 62, 332, 460, 613, 1015, 1080, 1188, 1224, 1386
MboI GATC 9 cut(s) 60, 330, 458, 611, 1013, 1078, 1186, 1222, 1384
MfeI CAATTG 1 cut(s) 953
MluCI AATT 7 cut(s) 22, 464, 631, 943, 953, 1001, 1463
MlyI GAGTC 3 cut(s) 376, 1037, 1139
MmeI TCCRAC 3 cut(s) 591, 1146, 1299
MseI TTAA 2 cut(s) 635, 1461
MslI CAYNNNNRTG 1 cut(s) 490
MspI CCGG 1 cut(s) 1056
MunI CAATTG 1 cut(s) 953
MvnI CGCG 1 cut(s) 351
MwoI GCNNNNNNNGC 2 cut(s) 650, 866
NdeI CATATG 1 cut(s) 161
NdeII GATC 9 cut(s) 60, 330, 458, 611, 1013, 1078, 1186, 1222, 1384
NlaIII CATG 5 cut(s) 209, 430, 1085, 1139, 1193
NlaIV GGNNCC 1 cut(s) 1434
NmuCI GTSAC 4 cut(s) 442, 853, 883, 1092
NsbI TGCGCA 1 cut(s) 554
PagI TCATGA 3 cut(s) 205, 1081, 1189
PfeI GAWTC 4 cut(s) 502, 967, 1234, 1296
PkrI GCNGC 2 cut(s) 39, 353
PleI GAGTC 3 cut(s) 375, 1036, 1139
PpsI GAGTC 3 cut(s) 375, 1036, 1139
PsiI TTATAA 1 cut(s) 1416
PspEI GGTNACC 2 cut(s) 69, 442
PspFI CCCAGC 1 cut(s) 984
PspN4I GGNNCC 1 cut(s) 1434
PspPI GGNCC 2 cut(s) 307, 1199
RsaI GTAC 3 cut(s) 243, 691, 1334
RsaNI GTAC 3 cut(s) 242, 690, 1333
RseI CAYNNNNRTG 1 cut(s) 490
SaqAI TTAA 2 cut(s) 635, 1461
SatI GCNGC 2 cut(s) 38, 352
Sau3AI GATC 9 cut(s) 60, 330, 458, 611, 1013, 1078, 1186, 1222, 1384
Sau96I GGNCC 2 cut(s) 307, 1199
ScaI AGTACT 1 cut(s) 1334
SchI GAGTC 3 cut(s) 376, 1037, 1139
SfaNI GCATC 3 cut(s) 67, 176, 526
SinI GGWCC 1 cut(s) 307
SmiMI CAYNNNNRTG 1 cut(s) 490
SmlI CTYRAG 2 cut(s) 107, 1274
SmoI CTYRAG 2 cut(s) 107, 1274
SpeI ACTAGT 1 cut(s) 1451
Sse9I AATT 7 cut(s) 22, 464, 631, 943, 953, 1001, 1463
SsiI CCGC 4 cut(s) 37, 40, 351, 1309
SspI AATATT 1 cut(s) 478
SspMI CTAG 5 cut(s) 144, 791, 840, 1452, 1471
StyI CCWWGG 1 cut(s) 1436
TaaI ACNGT 3 cut(s) 572, 595, 1098
TaiI ACGT 2 cut(s) 134, 1048
TaqI TCGA 3 cut(s) 52, 610, 970
TasI AATT 7 cut(s) 22, 464, 631, 943, 953, 1001, 1463
TatI WGTACW 2 cut(s) 241, 1332
TauI GCSGC 2 cut(s) 40, 354
TfiI GAWTC 4 cut(s) 502, 967, 1234, 1296
Tru1I TTAA 2 cut(s) 635, 1461
Tru9I TTAA 2 cut(s) 635, 1461
TscAI CASTG 6 cut(s) 70, 343, 444, 660, 1103, 1209
TseFI GTSAC 4 cut(s) 442, 853, 883, 1092
Tsp45I GTSAC 4 cut(s) 442, 853, 883, 1092
TspGWI ACGGA 2 cut(s) 242, 534
TspRI CASTG 6 cut(s) 70, 343, 444, 660, 1103, 1209
VpaK11BI GGWCC 1 cut(s) 307
XagI CCTNNNNNAGG 1 cut(s) 486
XapI RAATTY 4 cut(s) 22, 631, 943, 1463
XbaI TCTAGA 1 cut(s) 143
XspI CTAG 5 cut(s) 144, 791, 840, 1452, 1471
ZrmI AGTACT 1 cut(s) 1334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.