Rmu_sc0000272.1_g000005

domain in FBox and BRCT domain containing plant proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000272.1
OG0000062
Physical Location & Seq
Forward (+)
27041 .. 28364
1324 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000272.1_g000005.1.cds

Sequence Viewer

Length: 948 bp
atgcataatcttgttgaacttgatctttgtgttgaaaaagatggatcacattcagaggacgagtgtctcgagttgtctaagagccttttcatgtgcaaaacactggttgttttgaaactgcagtcaacttttgtcatcaatactcctacttcatggtgtttgtcatgtcttaaggttctgttcattacagtttatcatcctgataatgacccgatggaaaggcttttgcctggctgccctgcacttgaagatttggctatatctggaactgtgggagaaggctatttgaatttcaacgtctctgcgcttgaacttaagaagttaagaatcaatcttgacactgtagaagattatagtttggctgattataatgatctcaacatttttgttagagctccaaagctcgaatactttggtctcaagcagaccgctttgtcatattgtgttttggagaattcgaagtctttagtcaaagccactattgatctcaattaccacacagcaactgaacattctggctttgctggccgtgcaactgcacttttggcacacatttgcaatgtcaaatctttgtcccttgcagcacatggtttggatgtagagttgctgaagagatcacctaatctagaatctcttgtcttagaacacgacgtctacaattgtgatggaatagcggaatatggttttgaaaagatggagctactttggcatcctcctgagttggtgccaaattgtttgttgtcacacgtcaagactatctgtatcaaaagattcctgggaagggacgatgactttgaagtggcaaaatatttgttaaagaacggtaaagttttgaatagcatgaaaatttacgcaggtgacttttttgtgtgtacaaaggaggatatgttggagaaacttttaatgtttgaaaggggttctaagacaagtcaagttgaaattgcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

315

Amino Acids

35.4

Weight (kDa)

5.25

Isoelectric Point (pI)

32.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 369
AarI CACCTGC 1 cut(s) 845
AasI GACNNNNNNGTC 1 cut(s) 433
AatII GACGTC 1 cut(s) 654
Acc36I ACCTGC 1 cut(s) 845
AccB1I GGYRCC 1 cut(s) 724
AccI GTMKAC 1 cut(s) 654
AciI CCGC 2 cut(s) 429, 674
AclWI GGATC 1 cut(s) 52
AcoI YGGCCR 1 cut(s) 526
AcsI RAATTY 3 cut(s) 289, 454, 846
AcuI CTGAAG 1 cut(s) 629
AcyI GRCGYC 1 cut(s) 651
AfaI GTAC 1 cut(s) 874
AfiI CCNNNNNNNGG 1 cut(s) 781
AflII CTTAAG 2 cut(s) 170, 314
AflIII ACRYGT 1 cut(s) 745
AjiI CACGTC 1 cut(s) 748
AjnI CCWGG 2 cut(s) 229, 774
AluBI AGCT 3 cut(s) 395, 403, 700
AluI AGCT 3 cut(s) 395, 403, 700
Alw21I GWGCWC 1 cut(s) 397
Alw26I GTCTC 3 cut(s) 71, 304, 422
AlwI GGATC 1 cut(s) 52
AlwNI CAGNNNCTG 1 cut(s) 506
Ama87I CYCGRG 1 cut(s) 68
AoxI GGCC 1 cut(s) 526
ApeKI GCWGC 2 cut(s) 234, 581
ApoI RAATTY 3 cut(s) 289, 454, 846
ArsI GACNNNNNNTTYG 2 cut(s) 776, 808
AspLEI GCGC 1 cut(s) 307
AsuHPI GGTGA 2 cut(s) 609, 869
AsuII TTCGAA 1 cut(s) 458
AvaI CYCGRG 1 cut(s) 68
BanI GGYRCC 1 cut(s) 724
BanII GRGCYC 1 cut(s) 397
Bbv12I GWGCWC 1 cut(s) 397
BbvI GCAGC 2 cut(s) 221, 593
BccI CCATC 4 cut(s) 35, 208, 659, 688
BceAI ACGGC 1 cut(s) 513
BciT130I CCWGG 2 cut(s) 231, 776
BcoDI GTCTC 3 cut(s) 71, 304, 422
BfaI CTAG 1 cut(s) 626
BfmI CTRYAG 2 cut(s) 119, 342
BfrI CTTAAG 2 cut(s) 170, 314
BfuAI ACCTGC 1 cut(s) 845
BisI GCNGC 2 cut(s) 235, 582
BlsI GCNGC 2 cut(s) 236, 583
Bme1390I CCNGG 2 cut(s) 231, 776
BmeT110I CYCGRG 1 cut(s) 68
BmgBI CACGTC 1 cut(s) 748
BmiI GGNNCC 1 cut(s) 726
BmrFI CCNGG 2 cut(s) 231, 776
BmsI GCATC 1 cut(s) 718
BoxI GACNNNNGTC 1 cut(s) 63
Bpu14I TTCGAA 1 cut(s) 458
BpuEI CTTGAG 1 cut(s) 404
BsaHI GRCGYC 1 cut(s) 651
BsaI GGTCTC 1 cut(s) 422
BsaJI CCNNGG 1 cut(s) 775
BsaXI ACNNNNNCTCC 2 cut(s) 872, 902
Bsc4I CCNNNNNNNGG 1 cut(s) 781
Bse1I ACTGG 1 cut(s) 108
Bse3DI GCAATG 1 cut(s) 565
BseBI CCWGG 2 cut(s) 231, 776
BseDI CCNNGG 1 cut(s) 775
BseGI GGATG 3 cut(s) 196, 601, 709
BseLI CCNNNNNNNGG 1 cut(s) 781
BseMI GCAATG 1 cut(s) 565
BseMII CTCAG 1 cut(s) 708
BseNI ACTGG 1 cut(s) 108
BseXI GCAGC 2 cut(s) 221, 593
BsgI GTGCAG 2 cut(s) 225, 522
BshFI GGCC 1 cut(s) 528
BshNI GGYRCC 1 cut(s) 724
BsiHKAI GWGCWC 1 cut(s) 397
BsiHKCI CYCGRG 1 cut(s) 68
BslFI GGGAC 2 cut(s) 559, 797
BslI CCNNNNNNNGG 1 cut(s) 781
BsmAI GTCTC 3 cut(s) 71, 304, 422
BsmBI CGTCTC 1 cut(s) 304
BsmFI GGGAC 2 cut(s) 559, 797
BsnI GGCC 1 cut(s) 528
Bso31I GGTCTC 1 cut(s) 422
BsoBI CYCGRG 1 cut(s) 68
Bsp119I TTCGAA 1 cut(s) 458
Bsp1286I GDGCHC 1 cut(s) 397
Bsp1407I TGTACA 1 cut(s) 872
Bsp143I GATC 5 cut(s) 22, 44, 373, 484, 614
BspACI CCGC 2 cut(s) 429, 674
BspANI GGCC 1 cut(s) 528
BspCNI CTCAG 1 cut(s) 709
BspLI GGNNCC 1 cut(s) 726
BspMAI CTGCAG 1 cut(s) 123
BspMI ACCTGC 1 cut(s) 845
BspPI GGATC 1 cut(s) 52
BspT104I TTCGAA 1 cut(s) 458
BspT107I GGYRCC 1 cut(s) 724
BspTI CTTAAG 2 cut(s) 170, 314
BspTNI GGTCTC 1 cut(s) 422
BsrDI GCAATG 1 cut(s) 565
BsrGI TGTACA 1 cut(s) 872
BsrI ACTGG 1 cut(s) 108
BssECI CCNNGG 1 cut(s) 775
BssMI GATC 5 cut(s) 22, 44, 373, 484, 614
BssNI GRCGYC 1 cut(s) 651
Bst2UI CCWGG 2 cut(s) 231, 776
Bst4CI ACNGT 4 cut(s) 190, 271, 343, 824
Bst6I CTCTTC 1 cut(s) 605
BstACI GRCGYC 1 cut(s) 651
BstAFI CTTAAG 2 cut(s) 170, 314
BstAUI TGTACA 1 cut(s) 872
BstBI TTCGAA 1 cut(s) 458
BstC8I GCNNGC 1 cut(s) 526
BstDEI CTNAG 4 cut(s) 78, 640, 717, 921
BstF5I GGATG 3 cut(s) 196, 601, 709
BstHHI GCGC 1 cut(s) 307
BstKTI GATC 5 cut(s) 25, 47, 376, 487, 617
BstMAI GTCTC 3 cut(s) 71, 304, 422
BstMBI GATC 5 cut(s) 22, 44, 373, 484, 614
BstMWI GCNNNNNNNGC 4 cut(s) 525, 530, 545, 706
BstNI CCWGG 2 cut(s) 231, 776
BstPAI GACNNNNGTC 1 cut(s) 63
BstSCI CCNGG 2 cut(s) 229, 774
BstSFI CTRYAG 2 cut(s) 119, 342
BstV1I GCAGC 2 cut(s) 221, 593
BsuRI GGCC 1 cut(s) 528
BtrI CACGTC 1 cut(s) 748
BtsCI GGATG 3 cut(s) 196, 601, 709
BtsIMutI CAGTG 2 cut(s) 101, 339
BveI ACCTGC 1 cut(s) 845
Cac8I GCNNGC 1 cut(s) 526
CaiI CAGNNNCTG 1 cut(s) 506
CfoI GCGC 1 cut(s) 307
Csp6I GTAC 1 cut(s) 873
CviAII CATG 5 cut(s) 91, 153, 165, 587, 841
CviQI GTAC 1 cut(s) 873
DdeI CTNAG 4 cut(s) 78, 640, 717, 921
DpnI GATC 5 cut(s) 24, 46, 375, 486, 616
DpnII GATC 5 cut(s) 22, 44, 373, 484, 614
DrdI GACNNNNNNGTC 1 cut(s) 433
DseDI GACNNNNNNGTC 1 cut(s) 433
EaeI YGGCCR 1 cut(s) 526
Eam1104I CTCTTC 1 cut(s) 605
EarI CTCTTC 1 cut(s) 605
Ecl136II GAGCTC 1 cut(s) 395
Eco24I GRGCYC 1 cut(s) 397
Eco31I GGTCTC 1 cut(s) 422
Eco53kI GAGCTC 1 cut(s) 395
Eco57I CTGAAG 1 cut(s) 629
Eco88I CYCGRG 1 cut(s) 68
EcoICRI GAGCTC 1 cut(s) 395
EcoRI GAATTC 1 cut(s) 454
EcoRII CCWGG 2 cut(s) 229, 774
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 397
Esp3I CGTCTC 1 cut(s) 304
FaeI CATG 5 cut(s) 94, 156, 168, 590, 844
FaqI GGGAC 2 cut(s) 559, 797
FatI CATG 5 cut(s) 90, 152, 164, 586, 840
FblI GTMKAC 1 cut(s) 654
Fnu4HI GCNGC 2 cut(s) 235, 582
FokI GGATG 3 cut(s) 183, 608, 696
FriOI GRGCYC 1 cut(s) 397
Fsp4HI GCNGC 2 cut(s) 235, 582
FspBI CTAG 1 cut(s) 626
GlaI GCGC 1 cut(s) 306
GluI GCNGC 2 cut(s) 235, 582
HaeIII GGCC 1 cut(s) 528
HhaI GCGC 1 cut(s) 307
Hin1I GRCGYC 1 cut(s) 651
Hin1II CATG 5 cut(s) 94, 156, 168, 590, 844
Hin6I GCGC 1 cut(s) 305
HinP1I GCGC 1 cut(s) 305
HincII GTYRAC 1 cut(s) 126
HindII GTYRAC 1 cut(s) 126
HinfI GANTC 3 cut(s) 327, 629, 771
HphI GGTGA 2 cut(s) 609, 869
Hpy166II GTNNAC 3 cut(s) 126, 655, 873
Hpy188I TCNGA 1 cut(s) 55
Hpy188III TCNNGA 7 cut(s) 68, 200, 264, 335, 626, 716, 751
Hpy8I GTNNAC 3 cut(s) 126, 655, 873
Hpy99I CGWCG 1 cut(s) 653
HpyAV CCTTC 2 cut(s) 272, 774
HpyCH4III ACNGT 4 cut(s) 190, 271, 343, 824
HpyCH4IV ACGT 3 cut(s) 297, 651, 747
HpyCH4V TGCA 8 cut(s) 4, 96, 121, 242, 533, 539, 558, 581
HpyF10VI GCNNNNNNNGC 4 cut(s) 525, 530, 545, 706
HpyF3I CTNAG 4 cut(s) 78, 640, 717, 921
HpySE526I ACGT 3 cut(s) 297, 651, 747
Hsp92I GRCGYC 1 cut(s) 651
Hsp92II CATG 5 cut(s) 94, 156, 168, 590, 844
HspAI GCGC 1 cut(s) 305
Kzo9I GATC 5 cut(s) 22, 44, 373, 484, 614
LmnI GCTCC 2 cut(s) 400, 697
Lsp1109I GCAGC 2 cut(s) 221, 593
LweI GCATC 1 cut(s) 718
MaeI CTAG 1 cut(s) 626
MaeII ACGT 3 cut(s) 297, 651, 747
MaeIII GTNAC 2 cut(s) 741, 857
MalI GATC 5 cut(s) 24, 46, 375, 486, 616
MboI GATC 5 cut(s) 22, 44, 373, 484, 614
MboII GAAGA 3 cut(s) 260, 359, 622
MfeI CAATTG 1 cut(s) 658
MhlI GDGCHC 1 cut(s) 397
MluCI AATT 7 cut(s) 289, 454, 490, 658, 730, 846, 939
MmeI TCCRAC 1 cut(s) 870
MnlI CCTC 3 cut(s) 49, 723, 874
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 5 cut(s) 171, 315, 323, 815, 902
MspCI CTTAAG 2 cut(s) 170, 314
MspR9I CCNGG 2 cut(s) 231, 776
MunI CAATTG 1 cut(s) 658
MvaI CCWGG 2 cut(s) 231, 776
MwoI GCNNNNNNNGC 4 cut(s) 525, 530, 545, 706
NdeII GATC 5 cut(s) 22, 44, 373, 484, 614
NlaIII CATG 5 cut(s) 94, 156, 168, 590, 844
NlaIV GGNNCC 1 cut(s) 726
NmuCI GTSAC 2 cut(s) 741, 857
NsiI ATGCAT 1 cut(s) 6
NspV TTCGAA 1 cut(s) 458
PaeR7I CTCGAG 1 cut(s) 68
PaqCI CACCTGC 1 cut(s) 845
PcsI WCGNNNNNNNCGW 1 cut(s) 66
PfeI GAWTC 3 cut(s) 327, 629, 771
PkrI GCNGC 2 cut(s) 236, 583
PshAI GACNNNNGTC 1 cut(s) 63
PsiI TTATAA 1 cut(s) 369
Psp124BI GAGCTC 1 cut(s) 397
Psp6I CCWGG 2 cut(s) 229, 774
PspGI CCWGG 2 cut(s) 229, 774
PspN4I GGNNCC 1 cut(s) 726
PstI CTGCAG 1 cut(s) 123
PstNI CAGNNNCTG 1 cut(s) 506
RsaI GTAC 1 cut(s) 874
RsaNI GTAC 1 cut(s) 873
SacI GAGCTC 1 cut(s) 397
SaqAI TTAA 5 cut(s) 171, 315, 323, 815, 902
SatI GCNGC 2 cut(s) 235, 582
Sau3AI GATC 5 cut(s) 22, 44, 373, 484, 614
ScrFI CCNGG 2 cut(s) 231, 776
SduI GDGCHC 1 cut(s) 397
SetI ASST 9 cut(s) 177, 300, 397, 405, 622, 654, 702, 750, 859
SfaNI GCATC 1 cut(s) 718
SfcI CTRYAG 2 cut(s) 119, 342
Sfr274I CTCGAG 1 cut(s) 68
SfuI TTCGAA 1 cut(s) 458
SlaI CTCGAG 1 cut(s) 68
SmlI CTYRAG 4 cut(s) 68, 170, 314, 419
SmoI CTYRAG 4 cut(s) 68, 170, 314, 419
Sse9I AATT 7 cut(s) 289, 454, 490, 658, 730, 846, 939
SsiI CCGC 2 cut(s) 429, 674
SspI AATATT 1 cut(s) 809
SspMI CTAG 1 cut(s) 626
SstI GAGCTC 1 cut(s) 397
StyD4I CCNGG 2 cut(s) 229, 774
TaaI ACNGT 4 cut(s) 190, 271, 343, 824
TaiI ACGT 3 cut(s) 300, 654, 750
TaqI TCGA 3 cut(s) 69, 405, 458
TasI AATT 7 cut(s) 289, 454, 490, 658, 730, 846, 939
TatI WGTACW 1 cut(s) 872
TfiI GAWTC 3 cut(s) 327, 629, 771
Tru1I TTAA 5 cut(s) 171, 315, 323, 815, 902
Tru9I TTAA 5 cut(s) 171, 315, 323, 815, 902
TscAI CASTG 2 cut(s) 108, 346
TseFI GTSAC 2 cut(s) 741, 857
TseI GCWGC 2 cut(s) 234, 581
Tsp45I GTSAC 2 cut(s) 741, 857
TspDTI ATGAA 4 cut(s) 79, 141, 172, 857
TspRI CASTG 2 cut(s) 108, 346
Vha464I CTTAAG 2 cut(s) 170, 314
XapI RAATTY 3 cut(s) 289, 454, 846
XbaI TCTAGA 1 cut(s) 625
XhoI CTCGAG 1 cut(s) 68
XmiI GTMKAC 1 cut(s) 654
XspI CTAG 1 cut(s) 626
ZraI GACGTC 1 cut(s) 652
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.